Jatropha Genome Database

JcCA0066101.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0066101.10 + phase: 1 /partial
         (67 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma14g03960.1                                                       105   9e-24
Glyma02g44780.2                                                       105   1e-23
Glyma02g44780.1                                                       105   1e-23
Glyma14g03960.2                                                       105   1e-23
Glyma04g09780.1                                                        95   2e-20
Glyma06g09860.1                                                        95   2e-20

>Glyma14g03960.1 
          Length = 866

 Score =  105 bits (263), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 51/67 (76%), Positives = 53/67 (79%)

Query: 1   TKVEGILRQSADXXXXXXXXXXXXXGKSEFEPDEDAHVVGDCVKHVLRELPSSPVPASCC 60
           TKVEGILRQSAD             GK+EF P+EDAHVVGDCVKHVLRELPSSPVPASCC
Sbjct: 196 TKVEGILRQSADVEEVDRRVQEYEQGKTEFGPEEDAHVVGDCVKHVLRELPSSPVPASCC 255

Query: 61  TALLEAY 67
           TALLEAY
Sbjct: 256 TALLEAY 262


>Glyma02g44780.2 
          Length = 859

 Score =  105 bits (262), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 51/67 (76%), Positives = 53/67 (79%)

Query: 1   TKVEGILRQSADXXXXXXXXXXXXXGKSEFEPDEDAHVVGDCVKHVLRELPSSPVPASCC 60
           TKVEGILRQSAD             GK+EF P+EDAHVVGDCVKHVLRELPSSPVPASCC
Sbjct: 186 TKVEGILRQSADVEEVDRRVQEYEQGKTEFGPEEDAHVVGDCVKHVLRELPSSPVPASCC 245

Query: 61  TALLEAY 67
           TALLEAY
Sbjct: 246 TALLEAY 252


>Glyma02g44780.1 
          Length = 860

 Score =  105 bits (262), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 51/67 (76%), Positives = 53/67 (79%)

Query: 1   TKVEGILRQSADXXXXXXXXXXXXXGKSEFEPDEDAHVVGDCVKHVLRELPSSPVPASCC 60
           TKVEGILRQSAD             GK+EF P+EDAHVVGDCVKHVLRELPSSPVPASCC
Sbjct: 186 TKVEGILRQSADVEEVDRRVQEYEQGKTEFGPEEDAHVVGDCVKHVLRELPSSPVPASCC 245

Query: 61  TALLEAY 67
           TALLEAY
Sbjct: 246 TALLEAY 252


>Glyma14g03960.2 
          Length = 764

 Score =  105 bits (262), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 51/67 (76%), Positives = 53/67 (79%)

Query: 1   TKVEGILRQSADXXXXXXXXXXXXXGKSEFEPDEDAHVVGDCVKHVLRELPSSPVPASCC 60
           TKVEGILRQSAD             GK+EF P+EDAHVVGDCVKHVLRELPSSPVPASCC
Sbjct: 194 TKVEGILRQSADVEEVDRRVQEYEQGKTEFGPEEDAHVVGDCVKHVLRELPSSPVPASCC 253

Query: 61  TALLEAY 67
           TALLEAY
Sbjct: 254 TALLEAY 260


>Glyma04g09780.1 
          Length = 845

 Score = 95.1 bits (235), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 45/65 (69%), Positives = 48/65 (73%)

Query: 2   KVEGILRQSADXXXXXXXXXXXXXGKSEFEPDEDAHVVGDCVKHVLRELPSSPVPASCCT 61
            +EGILRQ+AD             GK EF PDEDAHVVGDCVKHV+RELPSSPVPASCC 
Sbjct: 183 NIEGILRQAADVDEVERRVREYEQGKVEFSPDEDAHVVGDCVKHVIRELPSSPVPASCCK 242

Query: 62  ALLEA 66
           ALLEA
Sbjct: 243 ALLEA 247


>Glyma06g09860.1 
          Length = 929

 Score = 94.7 bits (234), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 45/65 (69%), Positives = 48/65 (73%)

Query: 2   KVEGILRQSADXXXXXXXXXXXXXGKSEFEPDEDAHVVGDCVKHVLRELPSSPVPASCCT 61
            +EGILRQ+AD             GK EF PDEDAHVVGDCVKHV+RELPSSPVPASCC 
Sbjct: 201 NIEGILRQAADVDEVERRVREYEQGKVEFSPDEDAHVVGDCVKHVIRELPSSPVPASCCK 260

Query: 62  ALLEA 66
           ALLEA
Sbjct: 261 ALLEA 265