Jatropha Genome Database

JcCA0065711.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0065711.10 + phase: 0 
         (277 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g09560.1                                                       229   2e-60
Glyma06g08820.1                                                       164   1e-40
Glyma04g08720.1                                                       160   2e-39
Glyma03g33570.1                                                       130   2e-30
Glyma19g36280.1                                                       129   2e-30
Glyma10g05730.1                                                       121   7e-28
Glyma13g20080.1                                                       120   2e-27
Glyma17g18450.1                                                        69   7e-12
Glyma01g39610.1                                                        67   2e-11
Glyma16g16280.1                                                        67   2e-11
Glyma11g05640.1                                                        67   2e-11
Glyma04g09470.1                                                        53   4e-07

>Glyma06g09560.1 
          Length = 414

 Score =  229 bits (585), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 142/289 (49%), Positives = 173/289 (59%), Gaps = 28/289 (9%)

Query: 1   MASIRRTLSPAYHDRTYQXXXXXXXXXXXXXXXXHKFFTNSGTKYSTPFASSLFSFNVFP 60
           MAS RRTLSPAY DR Y                 HK   +S  KYS+P      +F    
Sbjct: 1   MASFRRTLSPAYPDRQY------LNGSFSVSSPSHKL-PSSNAKYSSPLPEIAAAFRR-- 51

Query: 61  LRWFLTAAFFQKRKG----FRRSLYRCXXXXXXXXXXXXXXXXXXENDVQNHDFSFEIKP 116
               L    F +R G    +RR  +RC                    DV++H+ SFE+KP
Sbjct: 52  ----LAGGVFTRRHGRKGQWRRVAFRCVLCFFVGFLLGMFPFGHVSEDVRSHEISFEMKP 107

Query: 117 PHVNVQLDDGGGD---------NRGIKRDVFALNSVSLGVDTQVNYISRFDYVPRKQLIV 167
           P +     +             NR ++R+ F ++ VSL  + +     RFD+ P+K LIV
Sbjct: 108 PPLPRAAANNAQQLLREERVLRNR-VEREGFVVDPVSLSAEREWQS-ERFDFAPKKPLIV 165

Query: 168 ITPTYNRALQAFFLNRLGQVLRLVQPPLLWIVVEMKTASVETAEILRKTGAMYRHLVCER 227
           +TPTY R  QA+FLNRLGQVLRLV PP++WIVVEMK AS+ETAE+LRKTG MYRHLVC +
Sbjct: 166 VTPTYERTFQAYFLNRLGQVLRLVPPPVVWIVVEMKAASMETAEVLRKTGVMYRHLVCNK 225

Query: 228 NSTNVKDRGVHQRNVALEHIERHRLDGIAYFADDDNVYSLELFESLRDI 276
           N T+VKDRGVHQRN ALEHIE HRLDGI YFADDDNVYSLELF++LRDI
Sbjct: 226 NLTDVKDRGVHQRNTALEHIEHHRLDGIVYFADDDNVYSLELFDALRDI 274


>Glyma06g08820.1 
          Length = 433

 Score =  164 bits (415), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 74/116 (63%), Positives = 92/116 (79%)

Query: 162 RKQLIVITPTYNRALQAFFLNRLGQVLRLVQPPLLWIVVEMKTASVETAEILRKTGAMYR 221
           +K LI++TPTYN   QA++L+RL Q L+LV PPLLWIVVEM + S ETA+ILR +G MYR
Sbjct: 177 QKLLIIVTPTYNHLFQAYYLHRLSQTLKLVPPPLLWIVVEMTSQSEETADILRSSGIMYR 236

Query: 222 HLVCERNSTNVKDRGVHQRNVALEHIERHRLDGIAYFADDDNVYSLELFESLRDIR 277
           HLVC+ N TN   R + QRNVA+ HIE HRLDGI YFADDDN+YSL+LF+ +R+ R
Sbjct: 237 HLVCKTNLTNPSHRSILQRNVAMAHIEIHRLDGIVYFADDDNIYSLDLFQQMRETR 292


>Glyma04g08720.1 
          Length = 407

 Score =  160 bits (404), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 71/116 (61%), Positives = 92/116 (79%)

Query: 162 RKQLIVITPTYNRALQAFFLNRLGQVLRLVQPPLLWIVVEMKTASVETAEILRKTGAMYR 221
           +K LI++TPT+N   QA++L+RL Q L+LV PPLLWIVVEM + S ETA+IL  +G MYR
Sbjct: 151 QKLLIIVTPTHNHIFQAYYLHRLSQTLKLVPPPLLWIVVEMTSQSEETADILWSSGIMYR 210

Query: 222 HLVCERNSTNVKDRGVHQRNVALEHIERHRLDGIAYFADDDNVYSLELFESLRDIR 277
           HL+C+ N TN   R + QRNVA+ HIE HRL+GI YFADDDN+YS+ELF+ +R+IR
Sbjct: 211 HLICKTNLTNPSHRSILQRNVAMAHIETHRLEGIVYFADDDNIYSVELFQQMREIR 266


>Glyma03g33570.1 
          Length = 342

 Score =  130 bits (326), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 66/117 (56%), Positives = 81/117 (69%), Gaps = 1/117 (0%)

Query: 161 PRKQLIVITPTYNR-ALQAFFLNRLGQVLRLVQPPLLWIVVEMKTASVETAEILRKTGAM 219
           PR+ LI++TPT  +   QA FL RL   ++LV  PLLWIVVE KT S E  EILRKTG M
Sbjct: 108 PRRLLIIVTPTSTKLPHQAVFLRRLANTIKLVPQPLLWIVVEAKTNSKELPEILRKTGIM 167

Query: 220 YRHLVCERNSTNVKDRGVHQRNVALEHIERHRLDGIAYFADDDNVYSLELFESLRDI 276
           YRH+V + N T ++    HQRN+AL+HIE HRL+GI +FA   NVY L+ F  LRDI
Sbjct: 168 YRHVVFKENFTELEAELNHQRNLALKHIEHHRLNGIVHFAGLSNVYDLQFFHQLRDI 224


>Glyma19g36280.1 
          Length = 344

 Score =  129 bits (325), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 65/117 (55%), Positives = 81/117 (69%), Gaps = 1/117 (0%)

Query: 161 PRKQLIVITPTYNR-ALQAFFLNRLGQVLRLVQPPLLWIVVEMKTASVETAEILRKTGAM 219
           PR+ +I++TPT  +   QA FL RL   ++LV  PLLWIVVE KT S E  EILRKTG M
Sbjct: 107 PRRLIIIVTPTSTKLPHQAVFLRRLANTIKLVPQPLLWIVVEAKTNSTELPEILRKTGIM 166

Query: 220 YRHLVCERNSTNVKDRGVHQRNVALEHIERHRLDGIAYFADDDNVYSLELFESLRDI 276
           YRH+V + N T ++    HQRN+AL+HIE HRL+GI +FA   NVY L+ F  LRDI
Sbjct: 167 YRHVVFKENFTELEAELNHQRNLALKHIEHHRLNGIVHFAGLSNVYDLQFFHQLRDI 223


>Glyma10g05730.1 
          Length = 347

 Score =  121 bits (304), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 60/117 (51%), Positives = 79/117 (67%), Gaps = 1/117 (0%)

Query: 161 PRKQLIVITPTYNR-ALQAFFLNRLGQVLRLVQPPLLWIVVEMKTASVETAEILRKTGAM 219
           PR+ +I++TPT  +   Q   L RL   ++LV  PLLWIVVE +T S E  ++LRKTG M
Sbjct: 98  PRRLIIIVTPTSTKHPFQTVILTRLANTIKLVPQPLLWIVVEGQTDSTELWKMLRKTGIM 157

Query: 220 YRHLVCERNSTNVKDRGVHQRNVALEHIERHRLDGIAYFADDDNVYSLELFESLRDI 276
           YRHLV + N T+++    HQRN+AL+HI  HRL GI +FA+  NVY LE F+ LR I
Sbjct: 158 YRHLVSKENFTDLEAELNHQRNLALKHIVHHRLSGIVHFAELSNVYDLEFFQQLRHI 214


>Glyma13g20080.1 
          Length = 344

 Score =  120 bits (301), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 60/117 (51%), Positives = 79/117 (67%), Gaps = 1/117 (0%)

Query: 161 PRKQLIVITPTYNR-ALQAFFLNRLGQVLRLVQPPLLWIVVEMKTASVETAEILRKTGAM 219
           PR+ +I++TPT  +   Q   L RL   ++LV  PLLWIVVE +T S E ++ LRKTG M
Sbjct: 95  PRRLIIIVTPTSTKLPFQTVILARLANTIKLVPQPLLWIVVEGQTDSTELSKTLRKTGIM 154

Query: 220 YRHLVCERNSTNVKDRGVHQRNVALEHIERHRLDGIAYFADDDNVYSLELFESLRDI 276
           YRHLV + N T+++    HQRN+AL+HI  HRL GI +FA+  NVY LE F+ LR I
Sbjct: 155 YRHLVSKENFTDLEAELNHQRNLALKHIVHHRLSGIVHFAELSNVYDLEFFQQLRYI 211


>Glyma17g18450.1 
          Length = 514

 Score = 68.6 bits (166), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 42/119 (35%), Positives = 64/119 (53%), Gaps = 4/119 (3%)

Query: 163 KQLIVITPTYNRALQAFFLNRLGQVLRLVQPPLLWIVVEMKTASVETAEILRKTGAMYRH 222
           K +I +TPT+ R  Q   L+ +   L L    ++WIVVE    + ETA I+ K+G    H
Sbjct: 156 KTVIAVTPTHVRTFQKLHLSGVMHSLMLAPYEVVWIVVEAGHVTNETASIIAKSGLRTIH 215

Query: 223 L-VCERNSTNVKDR---GVHQRNVALEHIERHRLDGIAYFADDDNVYSLELFESLRDIR 277
           +    R   +  DR       R  AL  + + RLDGI  FADD N++S+ELF+ ++ ++
Sbjct: 216 VGFNHRMPISWNDRHKLEARMRLHALRIVRKERLDGIVMFADDSNMHSMELFDEIQSVK 274


>Glyma01g39610.1 
          Length = 493

 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 40/119 (33%), Positives = 65/119 (54%), Gaps = 4/119 (3%)

Query: 163 KQLIVITPTYNRALQAFFLNRLGQVLRLVQPPLLWIVVEMKTASVETAEILRKTGAMYRH 222
           + +I +TPT+ R  Q   L  +   L LV   L+WIVVE    + ETA I+ K+G    H
Sbjct: 150 RTVIAVTPTHVRTFQTLHLTGVMHTLMLVPYDLVWIVVEAGGVTNETASIIAKSGLRTIH 209

Query: 223 LVCER---NSTNVKDR-GVHQRNVALEHIERHRLDGIAYFADDDNVYSLELFESLRDIR 277
           +   +   NS   + +     R  AL  + + +LDG+  FADD N++S+ELF+  ++++
Sbjct: 210 VGFSQRLPNSWEARHKLESRMRLHALRIVRKEKLDGVVVFADDSNMHSMELFDEAQNVK 268


>Glyma16g16280.1 
          Length = 502

 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 41/119 (34%), Positives = 64/119 (53%), Gaps = 4/119 (3%)

Query: 163 KQLIVITPTYNRALQAFFLNRLGQVLRLVQPPLLWIVVEMKTASVETAEILRKTGAMYRH 222
           K +I +TPT+ R  Q   L+ +   L L    ++WIVVE    + +TA I+ K+G    H
Sbjct: 157 KTVIAVTPTHVRTFQKLHLSGVMHSLMLAPYEVVWIVVEAGQVTNKTASIIAKSGLRTIH 216

Query: 223 L-VCERNSTNVKDR---GVHQRNVALEHIERHRLDGIAYFADDDNVYSLELFESLRDIR 277
           +    R   +  DR       R  AL  + + RLDGI  FADD N++S+ELF+ ++ ++
Sbjct: 217 VGFNHRMPISWNDRHKLEARMRLHALRIVRKERLDGIVMFADDSNMHSMELFDEIQSVK 275


>Glyma11g05640.1 
          Length = 491

 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 39/118 (33%), Positives = 65/118 (55%), Gaps = 4/118 (3%)

Query: 163 KQLIVITPTYNRALQAFFLNRLGQVLRLVQPPLLWIVVEMKTASVETAEILRKTGAMYRH 222
           + +I +TPT+ R  Q   L  +   L LV   L+WIVVE    + ETA I+ K+G    H
Sbjct: 148 RTVIAVTPTHVRTFQTLHLTGVMHALMLVPYDLVWIVVEAGGVTNETASIIAKSGLRTIH 207

Query: 223 L-VCERNSTNVKDRGVHQRNV---ALEHIERHRLDGIAYFADDDNVYSLELFESLRDI 276
           +   +R   + + R   +  +   AL  + + +LDG+  FADD N++S+ELF+  +++
Sbjct: 208 VGFSQRMPNSWEARHKLESRMRLHALRIVRKEKLDGVVVFADDSNMHSMELFDEAQNV 265


>Glyma04g09470.1 
          Length = 300

 Score = 52.8 bits (125), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 59/197 (29%), Positives = 83/197 (42%), Gaps = 39/197 (19%)

Query: 1   MASIRRTLSPAYHDRTYQXXXXXXXXXXXXXXXXHKFFTNSGTKYSTPFASSLFSFNVFP 60
           MAS RRTLSPAY DR Y                 HK   +S  KYS+P    + +F    
Sbjct: 1   MASFRRTLSPAYPDRQY------LNGSFSVSSPSHK-LPSSNAKYSSPLPELVAAF---- 49

Query: 61  LRWFLTAAFFQKRKG----FRRSLYRCXXXXXXXXXXXXXXXXXXENDVQNHDFSFEIKP 116
           LR  L    F +R G    +RR + RC                     V++H+FSFE+KP
Sbjct: 50  LR--LAGGVFTRRHGRKGQWRRVVVRCVLCFFVGFLLGMFPFGHVSETVRSHEFSFEMKP 107

Query: 117 PHV-----NVQL----DDGGGDNRGIKRDVFALNSVSLGVDTQV-NY-------ISRFDY 159
           P +     N Q     D G G+N   K  VF ++ + L    +  N+        SRF  
Sbjct: 108 PPLPRAANNAQQLLLEDRGKGENN--KNLVFTISLLILENRKETYNHDVFMFLECSRFGT 165

Query: 160 VPRKQLIVITPTYNRAL 176
            P   + ++ P+ N+A+
Sbjct: 166 WP---VAMLAPSKNKAI 179