Jatropha Genome Database

JcCA0060881.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0060881.10 + phase: 0 /partial
         (93 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma14g34600.1                                                       166   7e-42
Glyma13g01920.1                                                       159   7e-40
Glyma08g07840.1                                                       141   2e-34
Glyma05g24610.1                                                       141   2e-34
Glyma12g12900.1                                                        84   4e-17
Glyma14g34600.2                                                        82   1e-16
Glyma13g10760.1                                                        75   2e-14
Glyma20g15460.3                                                        73   6e-14
Glyma20g15460.2                                                        73   6e-14
Glyma20g15460.1                                                        73   6e-14
Glyma06g42130.1                                                        52   1e-07
Glyma13g36450.1                                                        52   2e-07
Glyma12g34090.1                                                        51   3e-07

>Glyma14g34600.1 
          Length = 386

 Score =  166 bits (419), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 80/86 (93%), Positives = 81/86 (94%)

Query: 8   LALSNLRLYLHAVTETKLVVDTSRGETLRINFDVTFPALPCSILSLDAMDISGEQHLDVK 67
           L  S LRLYLHAVTETKLVVDTSR ETLRINFDVTFPALPCSILSLDAMDISGEQHLDVK
Sbjct: 42  LFFSELRLYLHAVTETKLVVDTSRAETLRINFDVTFPALPCSILSLDAMDISGEQHLDVK 101

Query: 68  HDIIKKRLDSHGNVIEARQDGIGAPK 93
           HDIIKKRLDSHGNVIE RQ+GIGAPK
Sbjct: 102 HDIIKKRLDSHGNVIETRQEGIGAPK 127


>Glyma13g01920.1 
          Length = 386

 Score =  159 bits (402), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 78/86 (90%), Positives = 79/86 (91%)

Query: 8   LALSNLRLYLHAVTETKLVVDTSRGETLRINFDVTFPALPCSILSLDAMDISGEQHLDVK 67
           L  S LRLYLHAVTETKLVVDTSR ETLRINFDVTFPALPCSILSLDAMDISGEQ LDVK
Sbjct: 42  LFYSELRLYLHAVTETKLVVDTSRAETLRINFDVTFPALPCSILSLDAMDISGEQRLDVK 101

Query: 68  HDIIKKRLDSHGNVIEARQDGIGAPK 93
           HDIIKKRLDS GNVIE RQ+GIGAPK
Sbjct: 102 HDIIKKRLDSRGNVIETRQEGIGAPK 127


>Glyma08g07840.1 
          Length = 384

 Score =  141 bits (355), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 65/86 (75%), Positives = 78/86 (90%)

Query: 8   LALSNLRLYLHAVTETKLVVDTSRGETLRINFDVTFPALPCSILSLDAMDISGEQHLDVK 67
           L  S L LYL+ VTE+KL+VDTSRG+TL INFDVTFPA+ CSILSLDAMDISGEQHLD++
Sbjct: 42  LFFSELSLYLYTVTESKLLVDTSRGDTLHINFDVTFPAVRCSILSLDAMDISGEQHLDIR 101

Query: 68  HDIIKKRLDSHGNVIEARQDGIGAPK 93
           H+I+KKR+D++GNVIE R+DGIGAPK
Sbjct: 102 HNIVKKRIDANGNVIEERKDGIGAPK 127


>Glyma05g24610.1 
          Length = 384

 Score =  141 bits (355), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 65/86 (75%), Positives = 78/86 (90%)

Query: 8   LALSNLRLYLHAVTETKLVVDTSRGETLRINFDVTFPALPCSILSLDAMDISGEQHLDVK 67
           L  S L LYL+ VTE+KL+VDTSRG+TL INFDVTFPA+ CSILSLDAMDISGEQHLD++
Sbjct: 42  LFFSELSLYLYTVTESKLLVDTSRGDTLHINFDVTFPAVRCSILSLDAMDISGEQHLDIR 101

Query: 68  HDIIKKRLDSHGNVIEARQDGIGAPK 93
           H+I+KKR+D++GNVIE R+DGIGAPK
Sbjct: 102 HNIVKKRIDANGNVIEERKDGIGAPK 127


>Glyma12g12900.1 
          Length = 52

 Score = 83.6 bits (205), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 39/52 (75%), Positives = 45/52 (86%)

Query: 14 RLYLHAVTETKLVVDTSRGETLRINFDVTFPALPCSILSLDAMDISGEQHLD 65
          RLYLH VTETKLV+DTSR +T+ INFDV F AL CSIL+LDAMD++ EQHLD
Sbjct: 1  RLYLHTVTETKLVIDTSRAKTMCINFDVRFNALLCSILNLDAMDMNEEQHLD 52


>Glyma14g34600.2 
          Length = 297

 Score = 82.0 bits (201), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 36/38 (94%), Positives = 37/38 (97%)

Query: 56 MDISGEQHLDVKHDIIKKRLDSHGNVIEARQDGIGAPK 93
          MDISGEQHLDVKHDIIKKRLDSHGNVIE RQ+GIGAPK
Sbjct: 1  MDISGEQHLDVKHDIIKKRLDSHGNVIETRQEGIGAPK 38


>Glyma13g10760.1 
          Length = 351

 Score = 74.7 bits (182), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 36/79 (45%), Positives = 54/79 (68%)

Query: 4   ITQNLALSNLRLYLHAVTETKLVVDTSRGETLRINFDVTFPALPCSILSLDAMDISGEQH 63
           I   L +  L  YL   T  K+ VD  RGETL I+ ++TFP+LPC +LS+DA+D+SG+  
Sbjct: 37  IMATLFVHELGYYLTTYTVHKMSVDLKRGETLPIHINMTFPSLPCDVLSVDAIDMSGKHE 96

Query: 64  LDVKHDIIKKRLDSHGNVI 82
           +D+  +I K RL+S+G++I
Sbjct: 97  VDLDTNIWKLRLNSYGHII 115


>Glyma20g15460.3 
          Length = 347

 Score = 73.2 bits (178), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 35/79 (44%), Positives = 54/79 (68%)

Query: 4   ITQNLALSNLRLYLHAVTETKLVVDTSRGETLRINFDVTFPALPCSILSLDAMDISGEQH 63
           I   L +  L  YL   T  ++ VD  RGETL I+ ++TFP+LPC +LS+DA+D+SG+  
Sbjct: 37  IMATLFVHELGYYLTTYTVHQMSVDLKRGETLPIHINMTFPSLPCDVLSVDAIDMSGKHE 96

Query: 64  LDVKHDIIKKRLDSHGNVI 82
           +D+  +I K RL+S+G++I
Sbjct: 97  VDLDTNIWKLRLNSYGHII 115


>Glyma20g15460.2 
          Length = 347

 Score = 73.2 bits (178), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 35/79 (44%), Positives = 54/79 (68%)

Query: 4   ITQNLALSNLRLYLHAVTETKLVVDTSRGETLRINFDVTFPALPCSILSLDAMDISGEQH 63
           I   L +  L  YL   T  ++ VD  RGETL I+ ++TFP+LPC +LS+DA+D+SG+  
Sbjct: 37  IMATLFVHELGYYLTTYTVHQMSVDLKRGETLPIHINMTFPSLPCDVLSVDAIDMSGKHE 96

Query: 64  LDVKHDIIKKRLDSHGNVI 82
           +D+  +I K RL+S+G++I
Sbjct: 97  VDLDTNIWKLRLNSYGHII 115


>Glyma20g15460.1 
          Length = 347

 Score = 73.2 bits (178), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 35/79 (44%), Positives = 54/79 (68%)

Query: 4   ITQNLALSNLRLYLHAVTETKLVVDTSRGETLRINFDVTFPALPCSILSLDAMDISGEQH 63
           I   L +  L  YL   T  ++ VD  RGETL I+ ++TFP+LPC +LS+DA+D+SG+  
Sbjct: 37  IMATLFVHELGYYLTTYTVHQMSVDLKRGETLPIHINMTFPSLPCDVLSVDAIDMSGKHE 96

Query: 64  LDVKHDIIKKRLDSHGNVI 82
           +D+  +I K RL+S+G++I
Sbjct: 97  VDLDTNIWKLRLNSYGHII 115


>Glyma06g42130.1 
          Length = 480

 Score = 52.4 bits (124), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 26/67 (38%), Positives = 41/67 (61%), Gaps = 1/67 (1%)

Query: 13  LRLYLHAVTETKLVVD-TSRGETLRINFDVTFPALPCSILSLDAMDISGEQHLDVKHDII 71
           L  YL   T T ++VD +S G+ LRI+F+++FPAL C   S+D  D+ G   L++   + 
Sbjct: 46  LSSYLSVSTSTSVIVDKSSDGDYLRIDFNISFPALSCEFASVDVSDVLGTNRLNITKTVR 105

Query: 72  KKRLDSH 78
           K  +DS+
Sbjct: 106 KFSIDSN 112


>Glyma13g36450.1 
          Length = 480

 Score = 51.6 bits (122), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 25/67 (37%), Positives = 42/67 (62%), Gaps = 1/67 (1%)

Query: 13  LRLYLHAVTETKLVVD-TSRGETLRINFDVTFPALPCSILSLDAMDISGEQHLDVKHDII 71
           L  YL   T T+++VD +S G+ LRI+F+++FPAL C   ++D  D+ G   L++   + 
Sbjct: 46  LNSYLSVTTSTQVIVDKSSDGDYLRIDFNISFPALSCEFAAVDVSDVLGTNRLNLTKTVR 105

Query: 72  KKRLDSH 78
           K  +DS+
Sbjct: 106 KFSIDSN 112


>Glyma12g34090.1 
          Length = 480

 Score = 51.2 bits (121), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 25/67 (37%), Positives = 42/67 (62%), Gaps = 1/67 (1%)

Query: 13  LRLYLHAVTETKLVVD-TSRGETLRINFDVTFPALPCSILSLDAMDISGEQHLDVKHDII 71
           L  YL   T T+++VD +S G+ LRI+F+++FPAL C   ++D  D+ G   L++   + 
Sbjct: 46  LNSYLSVSTSTQVIVDKSSDGDYLRIDFNISFPALSCEFAAVDVSDVLGTNRLNLTKTVR 105

Query: 72  KKRLDSH 78
           K  +DS+
Sbjct: 106 KFSIDSN 112