Jatropha Genome Database

JcCA0060621.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0060621.10 + phase: 2 /partial
         (161 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma17g37540.1                                                       268   3e-72
Glyma14g40570.1                                                       266   7e-72
Glyma20g34160.1                                                       242   2e-64

>Glyma17g37540.1 
          Length = 502

 Score =  268 bits (684), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 125/132 (94%), Positives = 131/132 (99%)

Query: 1   FLSEYRFDISKLEPLVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFMAAAKVFL 60
           FL+EYRFD+SKLEP+VAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFMAAAKVFL
Sbjct: 326 FLAEYRFDVSKLEPVVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFMAAAKVFL 385

Query: 61  ASGKKVKVPTFLVPATQKVWMDVYSLPVPGSGGRTCSQIFEEAGCDTPASPSCGACLGGP 120
           ASGK+VKVPTFLVPATQKVWMD+YSLPVPGSGG+TCSQIFEEAGCDTPASPSCGACLGGP
Sbjct: 386 ASGKQVKVPTFLVPATQKVWMDLYSLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGP 445

Query: 121 KDTYARMNEPMV 132
           KDTYARMNEP V
Sbjct: 446 KDTYARMNEPKV 457


>Glyma14g40570.1 
          Length = 500

 Score =  266 bits (680), Expect = 7e-72,   Method: Compositional matrix adjust.
 Identities = 124/132 (93%), Positives = 130/132 (98%)

Query: 1   FLSEYRFDISKLEPLVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFMAAAKVFL 60
           FL+EYRFD+SKLEP+VAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFMAAAKVFL
Sbjct: 325 FLAEYRFDVSKLEPVVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFMAAAKVFL 384

Query: 61  ASGKKVKVPTFLVPATQKVWMDVYSLPVPGSGGRTCSQIFEEAGCDTPASPSCGACLGGP 120
           ASGK+VKVPTFLVPATQKVWMD+YSLPVPGSGG+TCSQIFEE GCDTPASPSCGACLGGP
Sbjct: 385 ASGKQVKVPTFLVPATQKVWMDLYSLPVPGSGGKTCSQIFEEVGCDTPASPSCGACLGGP 444

Query: 121 KDTYARMNEPMV 132
           KDTYARMNEP V
Sbjct: 445 KDTYARMNEPKV 456


>Glyma20g34160.1 
          Length = 535

 Score =  242 bits (617), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 110/132 (83%), Positives = 121/132 (91%)

Query: 1   FLSEYRFDISKLEPLVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFMAAAKVFL 60
           FL++YRFD+S +EPLVAKPHSPDNRALAREC +VKIDRVYIGSCTGGKTEDFMAAAKVFL
Sbjct: 360 FLAQYRFDVSNMEPLVAKPHSPDNRALARECNNVKIDRVYIGSCTGGKTEDFMAAAKVFL 419

Query: 61  ASGKKVKVPTFLVPATQKVWMDVYSLPVPGSGGRTCSQIFEEAGCDTPASPSCGACLGGP 120
           A GK VKVPTFLVPATQKVWMD+Y+L VP SGG+TCS IFEEAGCD PASPSC AC+GGP
Sbjct: 420 AGGKTVKVPTFLVPATQKVWMDLYTLEVPDSGGKTCSMIFEEAGCDPPASPSCAACMGGP 479

Query: 121 KDTYARMNEPMV 132
           +DTY R+NEP V
Sbjct: 480 RDTYGRLNEPQV 491