Jatropha Genome Database

JcCA0046101.30
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0046101.30 + phase: 0 /partial
         (219 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma10g12530.1                                                       243   2e-64
Glyma11g08610.3                                                        62   3e-10
Glyma11g08610.1                                                        62   3e-10
Glyma01g36700.2                                                        62   3e-10
Glyma01g36700.1                                                        62   3e-10
Glyma11g08610.2                                                        62   3e-10
Glyma09g41550.1                                                        62   6e-10

>Glyma10g12530.1 
          Length = 1649

 Score =  243 bits (619), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 119/224 (53%), Positives = 155/224 (69%), Gaps = 17/224 (7%)

Query: 1   GATESIDSITFSFLTDEEVRKHSFVKITDPRLLDLVDRPVLGGLYDPALGPLSEGTICKT 60
           GAT S++++ FSFLTD+E+R+ S VKIT P L+D +  PV  GLYD ALGP  + ++CK+
Sbjct: 7   GATNSVEAVAFSFLTDDEIRRSSRVKITSPILVDFLLHPVPDGLYDAALGPFDDKSLCKS 66

Query: 61  CGQRLTNCPGHCGHIDLVSPVYNPLLFNFLHKLLQRTCFYCFHFRIHRGQVDKCVKQLEL 120
           CGQ   +CPGH GHI+LVSPVYNPL+FN L  +LQRTCF C HFR    +VD    QLEL
Sbjct: 67  CGQTSKHCPGHFGHIELVSPVYNPLMFNILSNILQRTCFTCHHFRAPSKEVDIRTSQLEL 126

Query: 121 IVKGDIVGAKRLDSVLPSETL---YPEESDGSHESCSTVHSG----AQCHNGEHMKQKEW 173
           I+KGDI+ AKRL+S++P +++    P+ES         +H G    +QC++ E + +  W
Sbjct: 127 IMKGDIIRAKRLESIIPGKSVDSFNPDES---------IHPGDGDESQCYSAEQLGEN-W 176

Query: 174 TSLQFSEATSVLNTFLMPKFKKCKNCGAVNPNITKPMFGWFYTV 217
           TSLQFSEA SVL   L  K KKC+ CGA NP I+KP FGWF+ V
Sbjct: 177 TSLQFSEAMSVLRKLLTKKHKKCQKCGAKNPKISKPTFGWFHMV 220


>Glyma11g08610.3 
          Length = 1831

 Score = 62.4 bits (150), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 50/93 (53%), Gaps = 1/93 (1%)

Query: 9   ITFSFLTDEEVRKHSFVKITDPRLLDLVDRPVLGGLYDPALGPLSEGTICKTCGQRLTNC 68
           + F  L+ +E+R+ S V+I      +   +P +GGL DP LG +     C+TC   +  C
Sbjct: 18  VQFGILSPDEIRQMSVVQIEHGETTER-GKPKVGGLSDPRLGTIDRKLKCETCTASMAEC 76

Query: 69  PGHCGHIDLVSPVYNPLLFNFLHKLLQRTCFYC 101
           PGH GH++L  P+++      +  +++  CF C
Sbjct: 77  PGHFGHLELAKPMFHIGFLKTVLTIMRCVCFNC 109


>Glyma11g08610.1 
          Length = 1831

 Score = 62.4 bits (150), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 50/93 (53%), Gaps = 1/93 (1%)

Query: 9   ITFSFLTDEEVRKHSFVKITDPRLLDLVDRPVLGGLYDPALGPLSEGTICKTCGQRLTNC 68
           + F  L+ +E+R+ S V+I      +   +P +GGL DP LG +     C+TC   +  C
Sbjct: 18  VQFGILSPDEIRQMSVVQIEHGETTER-GKPKVGGLSDPRLGTIDRKLKCETCTASMAEC 76

Query: 69  PGHCGHIDLVSPVYNPLLFNFLHKLLQRTCFYC 101
           PGH GH++L  P+++      +  +++  CF C
Sbjct: 77  PGHFGHLELAKPMFHIGFLKTVLTIMRCVCFNC 109


>Glyma01g36700.2 
          Length = 1831

 Score = 62.4 bits (150), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 50/93 (53%), Gaps = 1/93 (1%)

Query: 9   ITFSFLTDEEVRKHSFVKITDPRLLDLVDRPVLGGLYDPALGPLSEGTICKTCGQRLTNC 68
           + F  L+ +E+R+ S V+I      +   +P +GGL DP LG +     C+TC   +  C
Sbjct: 18  VQFGILSPDEIRQMSVVQIEHGETTER-GKPKVGGLSDPRLGTIDRKLKCETCTASMAEC 76

Query: 69  PGHCGHIDLVSPVYNPLLFNFLHKLLQRTCFYC 101
           PGH GH++L  P+++      +  +++  CF C
Sbjct: 77  PGHFGHLELAKPMFHIGFLKTVLTIMRCVCFNC 109


>Glyma01g36700.1 
          Length = 1831

 Score = 62.4 bits (150), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 50/93 (53%), Gaps = 1/93 (1%)

Query: 9   ITFSFLTDEEVRKHSFVKITDPRLLDLVDRPVLGGLYDPALGPLSEGTICKTCGQRLTNC 68
           + F  L+ +E+R+ S V+I      +   +P +GGL DP LG +     C+TC   +  C
Sbjct: 18  VQFGILSPDEIRQMSVVQIEHGETTER-GKPKVGGLSDPRLGTIDRKLKCETCTASMAEC 76

Query: 69  PGHCGHIDLVSPVYNPLLFNFLHKLLQRTCFYC 101
           PGH GH++L  P+++      +  +++  CF C
Sbjct: 77  PGHFGHLELAKPMFHIGFLKTVLTIMRCVCFNC 109


>Glyma11g08610.2 
          Length = 1807

 Score = 62.4 bits (150), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 50/93 (53%), Gaps = 1/93 (1%)

Query: 9   ITFSFLTDEEVRKHSFVKITDPRLLDLVDRPVLGGLYDPALGPLSEGTICKTCGQRLTNC 68
           + F  L+ +E+R+ S V+I      +   +P +GGL DP LG +     C+TC   +  C
Sbjct: 18  VQFGILSPDEIRQMSVVQIEHGETTER-GKPKVGGLSDPRLGTIDRKLKCETCTASMAEC 76

Query: 69  PGHCGHIDLVSPVYNPLLFNFLHKLLQRTCFYC 101
           PGH GH++L  P+++      +  +++  CF C
Sbjct: 77  PGHFGHLELAKPMFHIGFLKTVLTIMRCVCFNC 109


>Glyma09g41550.1 
          Length = 1683

 Score = 61.6 bits (148), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 28/96 (29%), Positives = 51/96 (53%), Gaps = 1/96 (1%)

Query: 6   IDSITFSFLTDEEVRKHSFVKITDPRLLDLVDRPVLGGLYDPALGPLSEGTICKTCGQRL 65
           + ++ F  ++ +E+R+ S V+I      +   +P +GGL DP LG +     C TC   +
Sbjct: 15  VATVQFGIISPDEIRQMSVVQIEHGETTER-GKPKIGGLSDPRLGTIDRKLKCDTCTGSM 73

Query: 66  TNCPGHCGHIDLVSPVYNPLLFNFLHKLLQRTCFYC 101
             CPGH GH++L  P+++      +  +++  CF C
Sbjct: 74  AECPGHFGHLELAKPMFHIGFLKTVLAIMRCVCFNC 109