Jatropha Genome Database

JcCA0045831.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0045831.10 - phase: 0 
         (53 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma14g05340.1                                                        93   7e-20
Glyma02g43610.3                                                        93   7e-20
Glyma02g43610.2                                                        93   7e-20
Glyma02g43610.1                                                        93   7e-20
Glyma14g05340.2                                                        93   7e-20

>Glyma14g05340.1 
          Length = 190

 Score = 92.8 bits (229), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 44/44 (100%), Positives = 44/44 (100%)

Query: 1  MVLVLALGDLHIPHRAPDLPAKFKSMLVPGKIQHIICTGNLCIK 44
          MVLVLALGDLHIPHRAPDLPAKFKSMLVPGKIQHIICTGNLCIK
Sbjct: 1  MVLVLALGDLHIPHRAPDLPAKFKSMLVPGKIQHIICTGNLCIK 44


>Glyma02g43610.3 
          Length = 167

 Score = 92.8 bits (229), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 44/44 (100%), Positives = 44/44 (100%)

Query: 1  MVLVLALGDLHIPHRAPDLPAKFKSMLVPGKIQHIICTGNLCIK 44
          MVLVLALGDLHIPHRAPDLPAKFKSMLVPGKIQHIICTGNLCIK
Sbjct: 1  MVLVLALGDLHIPHRAPDLPAKFKSMLVPGKIQHIICTGNLCIK 44


>Glyma02g43610.2 
          Length = 190

 Score = 92.8 bits (229), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 44/44 (100%), Positives = 44/44 (100%)

Query: 1  MVLVLALGDLHIPHRAPDLPAKFKSMLVPGKIQHIICTGNLCIK 44
          MVLVLALGDLHIPHRAPDLPAKFKSMLVPGKIQHIICTGNLCIK
Sbjct: 1  MVLVLALGDLHIPHRAPDLPAKFKSMLVPGKIQHIICTGNLCIK 44


>Glyma02g43610.1 
          Length = 190

 Score = 92.8 bits (229), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 44/44 (100%), Positives = 44/44 (100%)

Query: 1  MVLVLALGDLHIPHRAPDLPAKFKSMLVPGKIQHIICTGNLCIK 44
          MVLVLALGDLHIPHRAPDLPAKFKSMLVPGKIQHIICTGNLCIK
Sbjct: 1  MVLVLALGDLHIPHRAPDLPAKFKSMLVPGKIQHIICTGNLCIK 44


>Glyma14g05340.2 
          Length = 183

 Score = 92.8 bits (229), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 44/45 (97%), Positives = 44/45 (97%)

Query: 1  MVLVLALGDLHIPHRAPDLPAKFKSMLVPGKIQHIICTGNLCIKV 45
          MVLVLALGDLHIPHRAPDLPAKFKSMLVPGKIQHIICTGNLCIK 
Sbjct: 1  MVLVLALGDLHIPHRAPDLPAKFKSMLVPGKIQHIICTGNLCIKT 45