Jatropha Genome Database

JcCA0045571.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0045571.10 - phase: 0 
         (175 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g48120.1                                                       228   2e-60
Glyma18g53370.1                                                       227   6e-60
Glyma13g07660.1                                                       227   6e-60
Glyma19g06740.1                                                       172   2e-43

>Glyma08g48120.1 
          Length = 421

 Score =  228 bits (582), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 112/160 (70%), Positives = 128/160 (80%), Gaps = 6/160 (3%)

Query: 16  LQRLKCSVQNYDWGKIGLDSKVGRLYELNSGSQIDVGKPYAELWMGTHESGPSFVVENGV 75
           LQRL CSV+NYDWG  G  S+V RL+ LNS SQ+    P+AELWMGTH+SGPSF+  +  
Sbjct: 6   LQRLHCSVKNYDWGLPGHVSEVARLHALNSASQLHAEDPFAELWMGTHDSGPSFLASSN- 64

Query: 76  ENGNPIGSHSISLKEWIFKNPNVLGDKVLDKWGCDLPFLFKVLSVAKALSIQAHPDKELA 135
            NGN      +SLK WI +NP+VLGDKVL KWG DLPFLFKVLSV KALSIQAHPDKELA
Sbjct: 65  RNGN-----GVSLKAWISENPDVLGDKVLHKWGSDLPFLFKVLSVGKALSIQAHPDKELA 119

Query: 136 KMLHKLHPDVYKDDNHKPEMALAITEFQALCGFISLKVLR 175
           + LHKLHPD+YKD NHKPEMALAIT F+ALCGFI+LK L+
Sbjct: 120 RTLHKLHPDLYKDANHKPEMALAITSFEALCGFITLKELK 159


>Glyma18g53370.1 
          Length = 421

 Score =  227 bits (578), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 112/161 (69%), Positives = 127/161 (78%), Gaps = 8/161 (4%)

Query: 16  LQRLKCSVQNYDWGKIGLDSKVGRLYELNSGSQIDVGKPYAELWMGTHESGPSFVVE-NG 74
           LQRL CSV+NYDWG  G  S+V RL+ LNS S+     PYAELWMGTH+SGPSF+   NG
Sbjct: 6   LQRLHCSVKNYDWGLPGRVSEVARLHALNSASEFHAEDPYAELWMGTHDSGPSFLASSNG 65

Query: 75  VENGNPIGSHSISLKEWIFKNPNVLGDKVLDKWGCDLPFLFKVLSVAKALSIQAHPDKEL 134
            ENG       +SLK WI +NP+VLG KVL KWG DLPFLFKVLSV KALSIQAHPDKEL
Sbjct: 66  NENG-------VSLKAWISENPDVLGHKVLHKWGSDLPFLFKVLSVGKALSIQAHPDKEL 118

Query: 135 AKMLHKLHPDVYKDDNHKPEMALAITEFQALCGFISLKVLR 175
           A+ LHKLHPD+YKD NHKPEMALA+T F+ALCGFI+LK L+
Sbjct: 119 ARTLHKLHPDLYKDGNHKPEMALALTNFEALCGFITLKELK 159


>Glyma13g07660.1 
          Length = 449

 Score =  227 bits (578), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 108/172 (62%), Positives = 135/172 (78%), Gaps = 11/172 (6%)

Query: 8   NRNHHGQRLQRLKCSVQNYDWGKIGLDSKVGRLYELNSGS----QIDVGKPYAELWMGTH 63
           + N++  ++Q L CSV+NY+WGK   DS V +L+ +NSGS    Q+D  +PYAELWMG+H
Sbjct: 12  HENNNSNKVQGLHCSVKNYEWGKPCRDSLVAKLFSMNSGSLQSSQLDEDQPYAELWMGSH 71

Query: 64  ESGPSFVVENGVENGNPIGSHSISLKEWIFKNPNVLGDKVLDKWGCDLPFLFKVLSVAKA 123
            SGPSF+V +G           ++LK W+ +NPNVLG KV++KWG DLPFLFKVLSV KA
Sbjct: 72  VSGPSFIVFDG-------SQQRVTLKSWLLENPNVLGPKVVEKWGGDLPFLFKVLSVDKA 124

Query: 124 LSIQAHPDKELAKMLHKLHPDVYKDDNHKPEMALAITEFQALCGFISLKVLR 175
           LSIQAHPDKELA+ LHKLHPDVYKD NHKPEMALA+TEF+ALCGF++LKVL+
Sbjct: 125 LSIQAHPDKELARTLHKLHPDVYKDGNHKPEMALAVTEFEALCGFVTLKVLK 176


>Glyma19g06740.1 
          Length = 273

 Score =  172 bits (436), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 82/123 (66%), Positives = 97/123 (78%), Gaps = 7/123 (5%)

Query: 53  KPYAELWMGTHESGPSFVVENGVENGNPIGSHSISLKEWIFKNPNVLGDKVLDKWGCDLP 112
           +PYAE WMG+H SGPSF+V +G E         ++LK W+ +NPNVLG KV++KWG DLP
Sbjct: 18  QPYAEFWMGSHVSGPSFIVLDGSE-------QRVTLKSWLLENPNVLGPKVVEKWGGDLP 70

Query: 113 FLFKVLSVAKALSIQAHPDKELAKMLHKLHPDVYKDDNHKPEMALAITEFQALCGFISLK 172
           FLFKVLSV KALSIQAHPDK LA+ L KLHPDVYKD NHKPEMALA TEF+ LCG ++LK
Sbjct: 71  FLFKVLSVDKALSIQAHPDKNLARTLLKLHPDVYKDGNHKPEMALAGTEFKVLCGLVTLK 130

Query: 173 VLR 175
            L+
Sbjct: 131 ELK 133