Jatropha Genome Database

JcCA0044531.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0044531.10 - phase: 0 /partial
         (184 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma12g33790.1                                                       161   3e-40
Glyma13g36700.1                                                       159   2e-39
Glyma07g30970.1                                                       107   8e-24
Glyma08g06330.1                                                        80   8e-16

>Glyma12g33790.1 
          Length = 365

 Score =  161 bits (408), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 90/186 (48%), Positives = 113/186 (60%), Gaps = 13/186 (6%)

Query: 1   IFIEAARRMGVDAAKCLVIEDSLXXXXXXXXXXXXXXXXPSQSEADCSLLADSVLHSLLE 60
           +F EAA++MGVDA  CLVIEDSL                PS+ EADC+ LA++VLHSLLE
Sbjct: 161 LFEEAAKKMGVDAVNCLVIEDSLVGVKAANAAKMKVVAVPSRREADCNGLANAVLHSLLE 220

Query: 61  FQPEIWGLPPFDDWVDSALPIEPIYLSILYKNGSISEVT--GTMAGGGESGLPCQVSGLY 118
           FQPE+WGLPPFDDW+D  LPI+P++LS LY  G + E T   T+A      LP Q  GLY
Sbjct: 221 FQPELWGLPPFDDWIDDTLPIDPLHLSGLYVTGCLQEATENATLA------LPDQAVGLY 274

Query: 119 FGWTQSGVHGILKVLVGIGGDHCSCSAKRNIMFLQQICTIDEKNDDVCDEQMQLVLVGYI 178
           FGWT+      LK+LV I  D  SC   + I     +  ID  ++    + MQ+ LVGYI
Sbjct: 275 FGWTKVDTDENLKILVSINIDF-SCVGYKKI----HVYLIDANSELKHKQMMQIHLVGYI 329

Query: 179 RKLDSK 184
           R  D+K
Sbjct: 330 RAWDNK 335


>Glyma13g36700.1 
          Length = 234

 Score =  159 bits (402), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 87/184 (47%), Positives = 109/184 (59%), Gaps = 9/184 (4%)

Query: 1   IFIEAARRMGVDAAKCLVIEDSLXXXXXXXXXXXXXXXXPSQSEADCSLLADSVLHSLLE 60
           +F EAA+++GVDA  CLVIEDSL                PS+ EADC  LA+ VLHSLLE
Sbjct: 31  LFEEAAKKIGVDAINCLVIEDSLVGVKAANAAKMKIVAVPSRREADCHGLANVVLHSLLE 90

Query: 61  FQPEIWGLPPFDDWVDSALPIEPIYLSILYKNGSISEVTGTMAGGGESGLPCQVSGLYFG 120
           FQPE+WGLPPFDDW+D+ LPI+PI+LS LY +G + E T           P Q  GLYFG
Sbjct: 91  FQPELWGLPPFDDWLDNTLPIDPIHLSGLYVSGCLEEATEN----ATLVFPDQAVGLYFG 146

Query: 121 WTQSGVHGILKVLVGIGGDHCSCSAKRNIMFLQQICTIDEKNDDVCDEQMQLVLVGYIRK 180
           W +    G  K+LV I  D      KR  ++L     ID  +D    ++MQ+ LVGYIR 
Sbjct: 147 WAKVDTDGNFKILVSINIDFSCVGYKRIHVYL-----IDANSDLKHKQKMQIHLVGYIRA 201

Query: 181 LDSK 184
            D+K
Sbjct: 202 WDNK 205


>Glyma07g30970.1 
          Length = 377

 Score =  107 bits (266), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 64/187 (34%), Positives = 104/187 (55%), Gaps = 12/187 (6%)

Query: 1   IFIEAARRMGVDAAKCLVIEDSLXXXXXXXXXXXXXXXXPS-QSEADCSLLADSVLHSLL 59
           IF+EAARR+ ++ + CLVIEDSL                PS   ++     AD V++SLL
Sbjct: 152 IFLEAARRLNMEPSSCLVIEDSLPGVTAGKTAEMEVVVVPSLPKQSHLYTAADEVINSLL 211

Query: 60  EFQPEIWGLPPFDDWVDSALPIEPIYL--SILYKNGSISEV----TGTMAGGGESGLPCQ 113
           + + E WGLPPF+DWV+  LP++P Y+   ++   G  S+V    T  ++  G S L  +
Sbjct: 212 DLRLEKWGLPPFEDWVEGTLPVDPWYIGGPVVKGFGRGSKVLGIPTANLSTEGYSDLLSE 271

Query: 114 V-SGLYFGWTQSGVHGILKVLVGIGGDHCSCSAKRNIMFLQQICTIDEKNDDVCDEQMQL 172
             +G+YFGW      G+ K+++ IG +    + ++ I    +   + + N+D   E+++L
Sbjct: 272 YPAGVYFGWAGLSARGVFKMVMSIGWNPYFNNKEKAI----EPWLLHDFNEDFYGEELRL 327

Query: 173 VLVGYIR 179
           V+VGYIR
Sbjct: 328 VIVGYIR 334


>Glyma08g06330.1 
          Length = 198

 Score = 80.5 bits (197), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 46/136 (33%), Positives = 79/136 (58%), Gaps = 11/136 (8%)

Query: 51  ADSVLHSLLEFQPEIWGLPPFDDWVDSALPIEPIYL--SILYKNGSISEV----TGTMAG 104
           AD V++SLL+ + E WGLPPF+DWV+  LP++P Y+   ++   G  S+V    T  ++ 
Sbjct: 29  ADEVINSLLDLRLEKWGLPPFEDWVEGTLPLDPWYIVGPVVKGFGRDSKVLGIPTANLST 88

Query: 105 GGESGLPCQ-VSGLYFGWTQSGVHGILKVLVGIGGDHCSCSAKRNIMFLQQICTIDEKND 163
            G S L  +  +G+YF W      G+ K+++ IG +    + ++ I    +   + + N+
Sbjct: 89  KGYSDLLSEHPAGVYFDWAGLSARGVFKMVMSIGWNPYFNNKEKTI----EPWLLHDFNE 144

Query: 164 DVCDEQMQLVLVGYIR 179
           D   E+++LV+VGYIR
Sbjct: 145 DFYGEELRLVIVGYIR 160