Jatropha Genome Database

JcCA0042771.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0042771.10 + phase: 1 /partial
         (435 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma07g11610.1                                                       677   0.0  
Glyma09g30560.1                                                       362   e-100

>Glyma07g11610.1 
          Length = 1214

 Score =  677 bits (1747), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 326/435 (74%), Positives = 378/435 (86%), Gaps = 8/435 (1%)

Query: 1   SAAGWGRQDDAGVVKFYETLTGVKVEGKLPLLVKETVLRSLPPEWPLDPIDDICRLNKSN 60
           SAAGWGR DDAGVVK YE LTGV+VEGKL    K+ +L+SLPPEWP D + DI  L +SN
Sbjct: 440 SAAGWGRIDDAGVVKVYEMLTGVRVEGKLQAQRKDVMLQSLPPEWPQDHVLDIQTLKESN 499

Query: 61  SKTLVVLDDDPTGTQTVHDTEVLTEWSVESLVKEFKKKTVCFFILTNSRSLSSEKASELI 120
           SK LVVLDDDPTGTQTVHD EVLTEW++ESL+++F+K   CFFILTNSRSLSS KAS LI
Sbjct: 500 SKILVVLDDDPTGTQTVHDIEVLTEWTIESLIEQFRKSPKCFFILTNSRSLSSGKASALI 559

Query: 121 KDICRNLSKAAKSVENVDYTVVLRGDSTLRGHFPEEADAAISVLGEMDAWIICPFFLQGG 180
           K+ICRNL  AAKSV+N+DYTVVLRGDSTLRGHFPEEADA +SVLGEMDAWI+CPFFLQGG
Sbjct: 560 KEICRNLDAAAKSVDNIDYTVVLRGDSTLRGHFPEEADAVVSVLGEMDAWILCPFFLQGG 619

Query: 181 RYTIEDVHYVADSDWLVPAGETEFAKDAAFGYKSSNLREWVEEKTQGRVPANTVTSISIQ 240
           RYTIED+HYV DSD LVPAG+TEFAKDA+FGYKSSNLR+WVEEKT G++  ++V SISIQ
Sbjct: 620 RYTIEDIHYVDDSDTLVPAGDTEFAKDASFGYKSSNLRDWVEEKTDGQILGSSVASISIQ 679

Query: 241 LLRKGGPNAVCELLCNLQKGSTCIVNAASERDMAVFAAGMIQAELKGKSFLCRTAASFVS 300
           LLRKGGP+AVC+ LC+LQKGS CIVNAASERDM         AEL GK FLCRTAASFVS
Sbjct: 680 LLRKGGPDAVCQHLCSLQKGSICIVNAASERDMT--------AELMGKRFLCRTAASFVS 731

Query: 301 ARIGIIPKAPILPKDLGINKDKSGGLIVVGSYVPKTTKQVEELKIQCGKVLRTIEVSVDK 360
           A +GII K PILP D+GI ++++GGLIVVGSYVPKTTKQVEELK+QCG+ L++IEVSV+K
Sbjct: 732 ALMGIISKPPILPNDIGIARERNGGLIVVGSYVPKTTKQVEELKLQCGQFLKSIEVSVEK 791

Query: 361 LSMKSLEERDEEINRAAELADIFLGVCKDTLIMTSRELITGKSPSESLEINFKVSSALVE 420
           L+M  +EE +EEI+RAAELAD++L   KDTLIMTSR LITGK+ +ESL+INFKVSSALVE
Sbjct: 792 LAMSPIEEMEEEISRAAELADVYLKAHKDTLIMTSRNLITGKTAAESLDINFKVSSALVE 851

Query: 421 IVRRISTRPRYILAK 435
           IV+RI+T+PRYI+AK
Sbjct: 852 IVKRITTKPRYIIAK 866


>Glyma09g30560.1 
          Length = 437

 Score =  362 bits (930), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 202/344 (58%), Positives = 245/344 (71%), Gaps = 52/344 (15%)

Query: 116 ASELIKDICRNLSKAAKSVENVDYTVVLRGDSTLRGHFPEEADAAISVLGEMDAWIICPF 175
           AS LIK+ICRNL  AAKSV+N+DYTVVLRGDSTLRGHF +EAD  +SVLG+MDAWIICPF
Sbjct: 1   ASALIKEICRNLDAAAKSVDNIDYTVVLRGDSTLRGHF-DEADV-VSVLGDMDAWIICPF 58

Query: 176 FLQGGRYTIEDVHYVADSDWLVPAGETEFAKDAAFGYKSSNLREWVEEKTQGRVPANTVT 235
           FLQGG +              +P G     K       ++NL+   EEKT GR+  + V 
Sbjct: 59  FLQGGLF--------------LP-GTLSLPKMLPL---ATNLQTLGEEKTNGRILGSRVA 100

Query: 236 SISIQLLRKGGPNAVCELLCNLQKGSTCIVNAASERDMAVFAAGMIQAELKGKSFLCRTA 295
           SISIQLLRKGGP+AVC  LC+LQKGS CIVNAASERDM         A L GK FLCRTA
Sbjct: 101 SISIQLLRKGGPDAVCRHLCSLQKGSICIVNAASERDMT--------AGLMGKRFLCRTA 152

Query: 296 ASFVSARIGIIPKAPILPKDLGINKDKSGGLIVVGSYVPKTTKQVEELKIQCGKVLRTIE 355
           ASFVS  +GII K PILP D+GI+++++GGLIVVGSY+PKTTKQVEELK+QCG+ L++ E
Sbjct: 153 ASFVSTLMGIISKPPILPNDIGIDRERNGGLIVVGSYIPKTTKQVEELKLQCGQFLKSTE 212

Query: 356 ------------------------VSVDKLSMKSLEERDEEINRAAELADIFLGVCKDTL 391
                                   VS +KL+M  +EER+EEI+R AELAD++L   KDTL
Sbjct: 213 GINIPNFFTTFSIVDSLTERMIKKVSAEKLAMSPIEEREEEISRTAELADVYLKAHKDTL 272

Query: 392 IMTSRELITGKSPSESLEINFKVSSALVEIVRRISTRPRYILAK 435
           IMTSR LITG++ +ESL+I FKV SALVEIV+RI+T+PRY++AK
Sbjct: 273 IMTSRNLITGRTATESLDIKFKVGSALVEIVKRITTKPRYVIAK 316