Jatropha Genome Database

JcCA0042101.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0042101.10 + phase: 0 
         (462 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma0048s00340.1                                                     651   0.0  
Glyma20g00260.1                                                       649   0.0  
Glyma10g12830.1                                                       160   4e-39
Glyma0086s00220.1                                                     115   1e-25

>Glyma0048s00340.1 
          Length = 1522

 Score =  651 bits (1679), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 324/444 (72%), Positives = 370/444 (83%), Gaps = 13/444 (2%)

Query: 1   MTKVYGTGAYDFKRHRVAEYPVELQTQLSDKPV-ESKPGSTLPSSITLSEIQRDRLTKIA 59
           MTKVYGTG YDF+RHRVAEYPV      S   V ++  G   PSSITLSEIQRDRLTKIA
Sbjct: 1   MTKVYGTGLYDFRRHRVAEYPVAAPPSESKAEVPKAGGGGGFPSSITLSEIQRDRLTKIA 60

Query: 60  AENWLKTGGTESDGTKKKEFDPELVKQIYETELKVKEGRKTVPLQRVMILEVSQYLENYL 119
             NWLK+G        KK+FDPELV++IYETEL VKEG K VPLQRVMILEVSQYLENYL
Sbjct: 61  EANWLKSGDA---ARPKKDFDPELVRKIYETELLVKEGSKPVPLQRVMILEVSQYLENYL 117

Query: 120 WPNFDPETATFEHVMSMILMINEKFRENVAAWLCFYDRKDVFKGFLERVLQLKEGRELSI 179
           WP+FDP  ATFEHVMS+I+M+NEKFRENVAAW CF++RKD FK FLERVL+LKEGRELSI
Sbjct: 118 WPHFDPLAATFEHVMSIIIMVNEKFRENVAAWTCFHERKDAFKVFLERVLRLKEGRELSI 177

Query: 180 SEKTNYLVFMINAFQSLEDEIVSETVLKLGSLQSWHCLSYGRFQMELCLNPELIKKWKRM 239
           +EKTNYLVFMINAFQSLEDE+VS T+L+L +L+SW+ LSYGRFQMELCLNP L+KKWKRM
Sbjct: 178 AEKTNYLVFMINAFQSLEDEVVSRTILRLANLKSWYSLSYGRFQMELCLNPGLVKKWKRM 237

Query: 240 VKREIKEAMKGGQPFDPSTSLEVKFLRNLIEEFLDVLDFQIFPQKSSINGDGL---ASGF 296
           +K+E  +   GG   DP T +EV F+RNLIEEF++V    +FPQK     D     A+G 
Sbjct: 238 IKKEPVKG--GGSHLDPLTKVEVMFVRNLIEEFMEV----VFPQKQLSGEDNELIDATGL 291

Query: 297 EEVDDSAVLYCERFMEFLIDLLSQLPTRRYLRPLVADVAVVAKCHLSALYKHEKGKLFAQ 356
             ++D+ VLYCERFMEFLIDLLSQLPTRRYLRPLVADVAVVAKCHLSALY+HEKGKLFAQ
Sbjct: 292 GLLNDACVLYCERFMEFLIDLLSQLPTRRYLRPLVADVAVVAKCHLSALYRHEKGKLFAQ 351

Query: 357 LVDLLQFYERFEINDHSGTQLTDDEVLQSHYDRFQAFQLLAFKKIPKLRELALSNIGAIH 416
           LVDLLQFYE FEINDH+GTQLTD EVL+SHY R Q+FQLLAFKK+ KLRELAL+NIG+IH
Sbjct: 352 LVDLLQFYEGFEINDHTGTQLTDHEVLESHYSRMQSFQLLAFKKMEKLRELALTNIGSIH 411

Query: 417 KRADLSKKLSVLSPEELKDLVCAR 440
           KRA+L+KKLSVLSPEEL++ VC +
Sbjct: 412 KRANLTKKLSVLSPEELRNFVCCK 435


>Glyma20g00260.1 
          Length = 1509

 Score =  649 bits (1674), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 331/449 (73%), Positives = 373/449 (83%), Gaps = 33/449 (7%)

Query: 1   MTKVYGTGAYDFKRHRVAEYPVELQTQLSDKPVESK---PGST-----LPSSITLSEIQR 52
           MTKVYGTG YDF+RHRVAEYPV      +  P ESK   P +      +PSSITLSEIQR
Sbjct: 1   MTKVYGTGLYDFRRHRVAEYPV------AAAPAESKTLVPKTGGGGGGVPSSITLSEIQR 54

Query: 53  DRLTKIAAENWLKTGGTESDGTKKKEFDPELVKQIYETELKVKEGRKTVPLQRVMILEVS 112
           DRLTKIA  NWLK+G     G  KK+FDPELV++IYETEL VKEG K VPLQRVMILEVS
Sbjct: 55  DRLTKIAEANWLKSGDA---GRPKKDFDPELVRKIYETELLVKEGSKPVPLQRVMILEVS 111

Query: 113 QYLENYLWPNFDPETATFEHVMSMILMINEKFRENVAAWLCFYDRKDVFKGFLERVLQLK 172
           QYLENYLWP FDP TATFEHVMS+I+M+NEKFRENVAAW CF++RKD FKGFLE VL+LK
Sbjct: 112 QYLENYLWPYFDPLTATFEHVMSIIIMVNEKFRENVAAWTCFHERKDAFKGFLESVLRLK 171

Query: 173 EGRELSISEKTNYLVFMINAFQSLEDEIVSETVLKLGSLQSWHCLSYGRFQMELCLNPEL 232
           EGRELSI+EKTNYLVFMINAFQSLEDE+VS T+L+L +L+SW+ LSYGRFQMELCLNP L
Sbjct: 172 EGRELSIAEKTNYLVFMINAFQSLEDEVVSRTILRLANLKSWYSLSYGRFQMELCLNPGL 231

Query: 233 IKKWKRMVKREIKEAMKG-GQPFDPSTSLEVKFLRNLIEEFLDVLDFQIFPQKSSINGDG 291
           IKKWKRM+K   KE +KG G   DPST++EV F+RNLIEEFL+  D ++           
Sbjct: 232 IKKWKRMIK---KEPVKGDGSHLDPSTTVEVMFVRNLIEEFLE--DDELID--------- 277

Query: 292 LASGFEEVDDSAVLYCERFMEFLIDLLSQLPTRRYLRPLVADVAVVAKCHLSALYKHEKG 351
            A+G   V+D+ VLYCERFMEFLIDLLSQLPTRRYLRPLVADVAVVAKCHLSALY+HEKG
Sbjct: 278 -ATGLGLVNDACVLYCERFMEFLIDLLSQLPTRRYLRPLVADVAVVAKCHLSALYRHEKG 336

Query: 352 KLFAQLVDLLQFYERFEINDHSGTQLTDDEVLQSHYDRFQAFQLLAFKKIPKLRELALSN 411
           KLFAQLVDLLQFYE FEINDH+GTQLTD EVL+SHY R Q+FQLLAFKK+ KLRELAL+N
Sbjct: 337 KLFAQLVDLLQFYEGFEINDHTGTQLTDHEVLESHYSRMQSFQLLAFKKMEKLRELALTN 396

Query: 412 IGAIHKRADLSKKLSVLSPEELKDLVCAR 440
           IG+IHKRA+LSKKLSVLSPEEL+D VC +
Sbjct: 397 IGSIHKRANLSKKLSVLSPEELRDFVCCK 425


>Glyma10g12830.1 
          Length = 347

 Score =  160 bits (404), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 81/130 (62%), Positives = 98/130 (75%), Gaps = 3/130 (2%)

Query: 316 DLLSQ---LPTRRYLRPLVADVAVVAKCHLSALYKHEKGKLFAQLVDLLQFYERFEINDH 372
           DLLS    L    YLRPLVA+VA+VAKCHLSA+Y+HEKGKLFAQ VDLLQFYE FEINDH
Sbjct: 73  DLLSNNFFLCNLEYLRPLVANVAIVAKCHLSAVYRHEKGKLFAQFVDLLQFYEWFEINDH 132

Query: 373 SGTQLTDDEVLQSHYDRFQAFQLLAFKKIPKLRELALSNIGAIHKRADLSKKLSVLSPEE 432
           +GTQLTDD+VL+SHY R Q +  +    +  + E+AL+NIG+IHK  +LSKKL VLS E 
Sbjct: 133 TGTQLTDDKVLESHYSRMQQYAKILLYYVLLVWEVALTNIGSIHKCVNLSKKLFVLSLEY 192

Query: 433 LKDLVCARYV 442
             D+  + YV
Sbjct: 193 FSDVFASFYV 202


>Glyma0086s00220.1 
          Length = 98

 Score =  115 bits (288), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 65/99 (65%), Positives = 74/99 (74%), Gaps = 6/99 (6%)

Query: 1  MTKVYGTGAYDFKRHRVAEYPVELQTQLSDKPV-ESKPGSTLPSSITLSEIQRDRLTKIA 59
          MTKVYGTG YDF RHRVAEYPV      S + V ++  G  +PSSITLSEIQRD+LTKIA
Sbjct: 1  MTKVYGTGLYDFWRHRVAEYPVAAAPAESKEVVPKTGGGGGVPSSITLSEIQRDQLTKIA 60

Query: 60 AENWLKTGGTESD-GTKKKEFDPELVKQIYETELKVKEG 97
            NWLK+    SD G  KK+FDPELV++IYETEL VKEG
Sbjct: 61 EANWLKS----SDAGRPKKDFDPELVRKIYETELLVKEG 95