Jatropha Genome Database

JcCA0036251.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0036251.10 + phase: 1 /pseudo/partial
         (168 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma17g10730.1                                                       145   3e-35
Glyma05g01160.1                                                       143   7e-35
Glyma04g33880.1                                                       136   9e-33
Glyma06g20570.1                                                       133   7e-32
Glyma06g20570.2                                                       133   8e-32
Glyma08g41060.1                                                       118   4e-27
Glyma02g11770.1                                                       115   2e-26
Glyma18g15480.1                                                       115   2e-26
Glyma01g05370.1                                                       109   1e-24
Glyma08g42340.1                                                        67   1e-11
Glyma18g12530.1                                                        62   2e-10
Glyma02g45740.1                                                        60   8e-10
Glyma14g03090.1                                                        59   2e-09
Glyma08g07120.1                                                        59   3e-09
Glyma10g25680.1                                                        48   5e-06
Glyma04g37440.2                                                        47   7e-06
Glyma04g37440.1                                                        47   7e-06
Glyma06g17610.1                                                        47   7e-06
Glyma08g01400.1                                                        47   8e-06
Glyma02g26640.1                                                        47   8e-06

>Glyma17g10730.1 
          Length = 170

 Score =  145 bits (365), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 68/91 (74%), Positives = 79/91 (86%), Gaps = 2/91 (2%)

Query: 62  IPIWSYAKLIMTCWLVIPYFSGAAYVYEHFVRPLFVNPKQTVNIWYVPRKKDVFSKPDDI 121
           IPIW YAKLI TCWLV+PYFSGAAYVYEH+VRP +VNP QT+NIWYVPRKKD   K DDI
Sbjct: 72  IPIWPYAKLIATCWLVLPYFSGAAYVYEHYVRPFYVNP-QTINIWYVPRKKDALGKRDDI 130

Query: 122 LTAAERYIEENGTEAFEKLIHRVSDEALTLG 152
           LTAAE+YI+ENGTEAFE +I+R +D++ T G
Sbjct: 131 LTAAEKYIQENGTEAFENIINR-ADKSRTGG 160


>Glyma05g01160.1 
          Length = 170

 Score =  143 bits (361), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 66/92 (71%), Positives = 75/92 (81%), Gaps = 1/92 (1%)

Query: 62  IPIWSYAKLIMTCWLVIPYFSGAAYVYEHFVRPLFVNPKQTVNIWYVPRKKDVFSKPDDI 121
           IPIW YAKLI TCWLV+PYFSGAAYVYEH+VRP +VNP QT+NIWYVPRKKD   K DDI
Sbjct: 72  IPIWPYAKLIATCWLVLPYFSGAAYVYEHYVRPFYVNP-QTINIWYVPRKKDALGKRDDI 130

Query: 122 LTAAERYIEENGTEAFEKLIHRVSDEALTLGF 153
           LTAAE+YI+ENGTEAFE +I+R        G+
Sbjct: 131 LTAAEKYIQENGTEAFENIINRADKSRRGDGY 162


>Glyma04g33880.1 
          Length = 162

 Score =  136 bits (343), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 63/82 (76%), Positives = 71/82 (86%), Gaps = 1/82 (1%)

Query: 62  IPIWSYAKLIMTCWLVIPYFSGAAYVYEHFVRPLFVNPKQTVNIWYVPRKKDVFSKPDDI 121
           IPIW YAKLI+T WLVIPYFSGAAYVYEH+VRP FVNP Q VNIWYVP KKD   KP+D+
Sbjct: 70  IPIWPYAKLILTSWLVIPYFSGAAYVYEHYVRPFFVNP-QNVNIWYVPSKKDSSGKPEDV 128

Query: 122 LTAAERYIEENGTEAFEKLIHR 143
           LTAAE+YIEE+GTEAFE L+ +
Sbjct: 129 LTAAEKYIEEHGTEAFENLLSK 150


>Glyma06g20570.1 
          Length = 165

 Score =  133 bits (335), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 62/82 (75%), Positives = 70/82 (85%), Gaps = 1/82 (1%)

Query: 62  IPIWSYAKLIMTCWLVIPYFSGAAYVYEHFVRPLFVNPKQTVNIWYVPRKKDVFSKPDDI 121
           IPIW YAKLI+T WLVIPYFSGAAYVYEH+VRP FVN  Q VNIWYVP KKD   KP+D+
Sbjct: 70  IPIWPYAKLILTSWLVIPYFSGAAYVYEHYVRPFFVN-SQNVNIWYVPSKKDSSGKPEDV 128

Query: 122 LTAAERYIEENGTEAFEKLIHR 143
           LTAAE+YI+E+GTEAFE L+ R
Sbjct: 129 LTAAEKYIKEHGTEAFENLLDR 150


>Glyma06g20570.2 
          Length = 156

 Score =  133 bits (335), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 62/82 (75%), Positives = 70/82 (85%), Gaps = 1/82 (1%)

Query: 62  IPIWSYAKLIMTCWLVIPYFSGAAYVYEHFVRPLFVNPKQTVNIWYVPRKKDVFSKPDDI 121
           IPIW YAKLI+T WLVIPYFSGAAYVYEH+VRP FVN  Q VNIWYVP KKD   KP+D+
Sbjct: 61  IPIWPYAKLILTSWLVIPYFSGAAYVYEHYVRPFFVN-SQNVNIWYVPSKKDSSGKPEDV 119

Query: 122 LTAAERYIEENGTEAFEKLIHR 143
           LTAAE+YI+E+GTEAFE L+ R
Sbjct: 120 LTAAEKYIKEHGTEAFENLLDR 141


>Glyma08g41060.1 
          Length = 181

 Score =  118 bits (295), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 50/91 (54%), Positives = 73/91 (80%), Gaps = 4/91 (4%)

Query: 62  IPIWSYAKLIMTCWLVIPYFSGAAYVYEHFVRPLFVNPK----QTVNIWYVPRKKDVFSK 117
           +PIW +AKLI +CWLV+P+F+GAA VY +++RP ++NP+    Q   IWY P+KK +F++
Sbjct: 74  LPIWPFAKLIFSCWLVLPHFNGAAVVYRNYIRPFYMNPQIPIPQGSQIWYFPQKKSLFNQ 133

Query: 118 PDDILTAAERYIEENGTEAFEKLIHRVSDEA 148
           PDD+L+AAERY+EE+GTEAFE+LI +   +A
Sbjct: 134 PDDVLSAAERYMEEHGTEAFERLISKNDRQA 164


>Glyma02g11770.1 
          Length = 182

 Score =  115 bits (289), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 53/95 (55%), Positives = 72/95 (75%), Gaps = 9/95 (9%)

Query: 62  IPIWSYAKLIMTCWLVIPYFSGAAYVYEHFVRPLFVNPK--------QTVNIWYVPRKKD 113
           + IW YAKLI++CWLV+P F+GAA+VY H+VRP ++NP+        +   +WYVPR K+
Sbjct: 72  LAIWPYAKLILSCWLVLPNFNGAAHVYRHYVRPFYMNPQMPQMPQIPRASQMWYVPR-KN 130

Query: 114 VFSKPDDILTAAERYIEENGTEAFEKLIHRVSDEA 148
           +FSK DD+LTAAERY+EE+GTE FE+LI +   EA
Sbjct: 131 IFSKQDDVLTAAERYMEEHGTEVFERLITKADREA 165


>Glyma18g15480.1 
          Length = 182

 Score =  115 bits (288), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 49/91 (53%), Positives = 73/91 (80%), Gaps = 4/91 (4%)

Query: 62  IPIWSYAKLIMTCWLVIPYFSGAAYVYEHFVRPLFVNPK----QTVNIWYVPRKKDVFSK 117
           +PIW +AKLI +CWLV+P+F+GAA VY +++RP ++NP+    Q   IWY P+KK +F++
Sbjct: 75  LPIWLFAKLIFSCWLVLPHFNGAAVVYRNYIRPFYMNPQIPIPQGSQIWYFPQKKSLFNE 134

Query: 118 PDDILTAAERYIEENGTEAFEKLIHRVSDEA 148
           PDD+L+AAERY+EE+GTEA E+LI++   +A
Sbjct: 135 PDDVLSAAERYMEEHGTEAIERLINKNDRQA 165


>Glyma01g05370.1 
          Length = 185

 Score =  109 bits (273), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 55/98 (56%), Positives = 73/98 (74%), Gaps = 12/98 (12%)

Query: 62  IPIWSYAKLIMTCWLVIPYFSGAAYVYEHFVRPLFVNPKQ-----------TVNIWYVPR 110
           + IW YAKLI++CWLV+P F+GAA+VY H+VRP ++NP+            T  +WYVPR
Sbjct: 72  LAIWPYAKLILSCWLVLPNFNGAAHVYRHYVRPFYMNPQMPQMPQMPQIPGTSQMWYVPR 131

Query: 111 KKDVFSKPDDILTAAERYIEENGTEAFEKLIHRVSDEA 148
            K++FSK DD+LTAAERY+EE+GTEAFE+LI +   EA
Sbjct: 132 -KNIFSKQDDVLTAAERYMEEHGTEAFERLITKADREA 168


>Glyma08g42340.1 
          Length = 158

 Score = 66.6 bits (161), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 37/88 (42%), Positives = 50/88 (56%), Gaps = 2/88 (2%)

Query: 63  PIWSYAKLIMTCWLVIPYFSGAAYVYEHFVRPLFVNPKQTV-NIWYVPRKKDVFSKPD-D 120
           PIW Y KL+   WLV+P F+GAAY+YE++VR    N      N  Y   +K V      D
Sbjct: 68  PIWPYMKLVFCLWLVLPMFNGAAYIYENYVRQYVKNIGSYYGNSKYPEEQKKVLQMMSLD 127

Query: 121 ILTAAERYIEENGTEAFEKLIHRVSDEA 148
              A ERYI+ +G++AFE++I     EA
Sbjct: 128 ARKAVERYIDTHGSDAFERVIKAADREA 155


>Glyma18g12530.1 
          Length = 185

 Score = 62.4 bits (150), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 35/88 (39%), Positives = 49/88 (55%), Gaps = 2/88 (2%)

Query: 63  PIWSYAKLIMTCWLVIPYFSGAAYVYEHFVRPLFVNPKQTV-NIWYVPRKKDVFSKPD-D 120
           PIW Y KL+   WLV+P F+GAAY+YE++VR    +      N  Y   +K V      D
Sbjct: 95  PIWPYMKLVFCLWLVLPMFNGAAYIYENYVRQYVKHIGSYYGNSKYPEVQKKVLQMMSLD 154

Query: 121 ILTAAERYIEENGTEAFEKLIHRVSDEA 148
              A ERYI+  G++AFE+++     EA
Sbjct: 155 ARKAVERYIDTYGSDAFERVVKAADREA 182


>Glyma02g45740.1 
          Length = 123

 Score = 60.5 bits (145), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 34/87 (39%), Positives = 47/87 (54%), Gaps = 3/87 (3%)

Query: 63  PIWSYAKLIMTCWLVIPYFSGAAYVYEHFVRPLFVNPKQTVNIWYVPRKKDVFSKPD-DI 121
           PIW Y KL+   WLV+P F+GAAY+ E++VR    N  ++ N  Y    K V      D 
Sbjct: 36  PIWGYLKLMFCIWLVMPMFNGAAYINENYVRQYIKNIGRSSN--YSEEYKKVLHMMTFDA 93

Query: 122 LTAAERYIEENGTEAFEKLIHRVSDEA 148
             A ERYI   G +AFE+++     E+
Sbjct: 94  RKAVERYIGRYGPDAFERVVRAAEKES 120


>Glyma14g03090.1 
          Length = 154

 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 34/87 (39%), Positives = 48/87 (55%), Gaps = 4/87 (4%)

Query: 63  PIWSYAKLIMTCWLVIPYFSGAAYVYEHFVRPLFVNPKQTVNIWYVPRKKDVFSKPD-DI 121
           PIW Y KL+   WLV+P F+GAAY+YE++VR  ++    T N  Y    K V      D 
Sbjct: 68  PIWGYLKLMFCVWLVLPMFNGAAYIYENYVRQ-YIKNIGTSN--YSDEYKKVLHMMTFDA 124

Query: 122 LTAAERYIEENGTEAFEKLIHRVSDEA 148
             A ERY +  G +AF++++     EA
Sbjct: 125 RKAVERYNDRYGPDAFDRVVRAAEKEA 151


>Glyma08g07120.1 
          Length = 386

 Score = 58.5 bits (140), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 9/81 (11%)

Query: 65  WSYAKLIMTCWLVIPYFSGAAYVYEHFVRP-LFVNPKQTV---NIWYVPRKKDVFSKPDD 120
           W Y KL++   LV P F  A+Y Y + +R  + +NP+  +   N W     +  F K DD
Sbjct: 73  WPYIKLMIIFCLVTPDFGRASYAYNNLIRTCISLNPQAIICRLNNW-----RKFFVKKDD 127

Query: 121 ILTAAERYIEENGTEAFEKLI 141
            L   ERY+ ENGTEA EKLI
Sbjct: 128 FLLHVERYLNENGTEALEKLI 148


>Glyma10g25680.1 
          Length = 109

 Score = 47.8 bits (112), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 20/32 (62%), Positives = 24/32 (75%)

Query: 62 IPIWSYAKLIMTCWLVIPYFSGAAYVYEHFVR 93
          IPIW   KL+   WLV+P F+GAAY+YE FVR
Sbjct: 33 IPIWYDVKLLTVAWLVLPQFAGAAYLYERFVR 64


>Glyma04g37440.2 
          Length = 144

 Score = 47.4 bits (111), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 20/32 (62%), Positives = 24/32 (75%)

Query: 62 IPIWSYAKLIMTCWLVIPYFSGAAYVYEHFVR 93
          IPIW   KL+   WLV+P F+GAAY+YE FVR
Sbjct: 67 IPIWYDVKLLTVAWLVLPQFAGAAYLYERFVR 98


>Glyma04g37440.1 
          Length = 146

 Score = 47.4 bits (111), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 20/32 (62%), Positives = 24/32 (75%)

Query: 62 IPIWSYAKLIMTCWLVIPYFSGAAYVYEHFVR 93
          IPIW   KL+   WLV+P F+GAAY+YE FVR
Sbjct: 67 IPIWYDVKLLTVAWLVLPQFAGAAYLYERFVR 98


>Glyma06g17610.1 
          Length = 146

 Score = 47.4 bits (111), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 20/32 (62%), Positives = 24/32 (75%)

Query: 62 IPIWSYAKLIMTCWLVIPYFSGAAYVYEHFVR 93
          IPIW   KL+   WLV+P F+GAAY+YE FVR
Sbjct: 67 IPIWYDVKLLTVAWLVLPQFAGAAYLYERFVR 98


>Glyma08g01400.1 
          Length = 144

 Score = 47.4 bits (111), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 19/33 (57%), Positives = 23/33 (69%)

Query: 62  IPIWSYAKLIMTCWLVIPYFSGAAYVYEHFVRP 94
           IPIW   KL +  WL++P F GAA +YE FVRP
Sbjct: 69  IPIWGDVKLFLVLWLILPQFKGAAVLYERFVRP 101


>Glyma02g26640.1 
          Length = 181

 Score = 47.4 bits (111), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 23/46 (50%), Positives = 28/46 (60%), Gaps = 2/46 (4%)

Query: 46  HFC*SY*MMFYIDDGRIPIWSYAKLIMTCWLVIPYFSGAAYVYEHF 91
           H C SY +   I    IPIW   KL+   WLV+P F+GAAY+YE F
Sbjct: 97  HLCDSYGLR--IKKKLIPIWYNVKLLTVAWLVLPQFAGAAYLYERF 140