Jatropha Genome Database

JcCA0029581.30
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0029581.30 - phase: 2 /partial
         (60 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma12g09430.2                                                       112   1e-25
Glyma12g09430.1                                                       112   1e-25
Glyma12g09430.3                                                       112   1e-25
Glyma11g19030.1                                                       112   1e-25
Glyma13g39330.1                                                       105   8e-24
Glyma12g30990.1                                                       105   1e-23
Glyma11g36010.2                                                        59   2e-09
Glyma11g36010.1                                                        59   2e-09
Glyma18g02430.4                                                        59   2e-09
Glyma18g02430.3                                                        59   2e-09
Glyma18g02430.2                                                        59   2e-09
Glyma18g02430.1                                                        59   2e-09
Glyma19g32710.1                                                        56   8e-09
Glyma03g29820.1                                                        56   8e-09
Glyma02g30090.1                                                        53   9e-08
Glyma10g12000.1                                                        51   3e-07
Glyma03g28320.1                                                        50   4e-07
Glyma19g31050.4                                                        50   4e-07
Glyma19g31050.3                                                        50   4e-07
Glyma19g31050.1                                                        50   4e-07
Glyma19g31050.2                                                        50   4e-07
Glyma03g28320.2                                                        50   4e-07

>Glyma12g09430.2 
          Length = 491

 Score =  112 bits (280), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 49/60 (81%), Positives = 57/60 (95%)

Query: 1   TVRQAARCFLVIGEYYGRLRALSSLWASRPRESMMGDENSCQTTSDLQMVQPPQNHFTNF 60
           TVRQAARCFLVIGEYYGRLRALSSLWASRPRE+++ D+NSCQTT++LQMVQ  QNHF++F
Sbjct: 432 TVRQAARCFLVIGEYYGRLRALSSLWASRPRETLISDDNSCQTTTELQMVQSSQNHFSSF 491


>Glyma12g09430.1 
          Length = 491

 Score =  112 bits (280), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 49/60 (81%), Positives = 57/60 (95%)

Query: 1   TVRQAARCFLVIGEYYGRLRALSSLWASRPRESMMGDENSCQTTSDLQMVQPPQNHFTNF 60
           TVRQAARCFLVIGEYYGRLRALSSLWASRPRE+++ D+NSCQTT++LQMVQ  QNHF++F
Sbjct: 432 TVRQAARCFLVIGEYYGRLRALSSLWASRPRETLISDDNSCQTTTELQMVQSSQNHFSSF 491


>Glyma12g09430.3 
          Length = 490

 Score =  112 bits (279), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 49/60 (81%), Positives = 57/60 (95%)

Query: 1   TVRQAARCFLVIGEYYGRLRALSSLWASRPRESMMGDENSCQTTSDLQMVQPPQNHFTNF 60
           TVRQAARCFLVIGEYYGRLRALSSLWASRPRE+++ D+NSCQTT++LQMVQ  QNHF++F
Sbjct: 431 TVRQAARCFLVIGEYYGRLRALSSLWASRPRETLISDDNSCQTTTELQMVQSSQNHFSSF 490


>Glyma11g19030.1 
          Length = 410

 Score =  112 bits (279), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 50/60 (83%), Positives = 57/60 (95%)

Query: 1   TVRQAARCFLVIGEYYGRLRALSSLWASRPRESMMGDENSCQTTSDLQMVQPPQNHFTNF 60
           TVRQAARCFLVIGEYYGRLRALSSLWASRPRES++ D+NSCQTT++LQMVQ  QNHF++F
Sbjct: 351 TVRQAARCFLVIGEYYGRLRALSSLWASRPRESLISDDNSCQTTTELQMVQSSQNHFSSF 410


>Glyma13g39330.1 
          Length = 304

 Score =  105 bits (263), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 45/60 (75%), Positives = 57/60 (95%)

Query: 1   TVRQAARCFLVIGEYYGRLRALSSLWASRPRESMMGDENSCQTTSDLQMVQPPQNHFTNF 60
           TVRQAARCF+VIGEYYGRLRALSSLWASRPRE+++ D+NSCQTT+++Q+VQ  QN+F++F
Sbjct: 245 TVRQAARCFIVIGEYYGRLRALSSLWASRPRETLISDDNSCQTTTEMQIVQHSQNYFSSF 304


>Glyma12g30990.1 
          Length = 487

 Score =  105 bits (262), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 45/60 (75%), Positives = 57/60 (95%)

Query: 1   TVRQAARCFLVIGEYYGRLRALSSLWASRPRESMMGDENSCQTTSDLQMVQPPQNHFTNF 60
           TVRQAARCF+VIGEYYGRLRALSSLWASRPRE+++ D+NSCQTT+++Q+VQ  QN+F++F
Sbjct: 428 TVRQAARCFIVIGEYYGRLRALSSLWASRPRETLINDDNSCQTTTEMQIVQHSQNYFSSF 487


>Glyma11g36010.2 
          Length = 362

 Score = 58.5 bits (140), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 24/32 (75%), Positives = 29/32 (90%)

Query: 1   TVRQAARCFLVIGEYYGRLRALSSLWASRPRE 32
           T+RQAARC L +GEY+ RLRALSSLW++RPRE
Sbjct: 329 TIRQAARCLLALGEYFQRLRALSSLWSNRPRE 360


>Glyma11g36010.1 
          Length = 362

 Score = 58.5 bits (140), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 24/32 (75%), Positives = 29/32 (90%)

Query: 1   TVRQAARCFLVIGEYYGRLRALSSLWASRPRE 32
           T+RQAARC L +GEY+ RLRALSSLW++RPRE
Sbjct: 329 TIRQAARCLLALGEYFQRLRALSSLWSNRPRE 360


>Glyma18g02430.4 
          Length = 362

 Score = 58.5 bits (140), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 24/32 (75%), Positives = 29/32 (90%)

Query: 1   TVRQAARCFLVIGEYYGRLRALSSLWASRPRE 32
           T+RQAARC L +GEY+ RLRALSSLW++RPRE
Sbjct: 329 TIRQAARCLLALGEYFQRLRALSSLWSNRPRE 360


>Glyma18g02430.3 
          Length = 362

 Score = 58.5 bits (140), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 24/32 (75%), Positives = 29/32 (90%)

Query: 1   TVRQAARCFLVIGEYYGRLRALSSLWASRPRE 32
           T+RQAARC L +GEY+ RLRALSSLW++RPRE
Sbjct: 329 TIRQAARCLLALGEYFQRLRALSSLWSNRPRE 360


>Glyma18g02430.2 
          Length = 362

 Score = 58.5 bits (140), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 24/32 (75%), Positives = 29/32 (90%)

Query: 1   TVRQAARCFLVIGEYYGRLRALSSLWASRPRE 32
           T+RQAARC L +GEY+ RLRALSSLW++RPRE
Sbjct: 329 TIRQAARCLLALGEYFQRLRALSSLWSNRPRE 360


>Glyma18g02430.1 
          Length = 362

 Score = 58.5 bits (140), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 24/32 (75%), Positives = 29/32 (90%)

Query: 1   TVRQAARCFLVIGEYYGRLRALSSLWASRPRE 32
           T+RQAARC L +GEY+ RLRALSSLW++RPRE
Sbjct: 329 TIRQAARCLLALGEYFQRLRALSSLWSNRPRE 360


>Glyma19g32710.1 
          Length = 338

 Score = 56.2 bits (134), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 24/32 (75%), Positives = 27/32 (84%)

Query: 1   TVRQAARCFLVIGEYYGRLRALSSLWASRPRE 32
           T RQAARCFL I EY+ RLRALSSLW +RPR+
Sbjct: 306 TTRQAARCFLAIAEYFHRLRALSSLWLARPRQ 337


>Glyma03g29820.1 
          Length = 338

 Score = 56.2 bits (134), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 24/32 (75%), Positives = 27/32 (84%)

Query: 1   TVRQAARCFLVIGEYYGRLRALSSLWASRPRE 32
           T RQAARCFL I EY+ RLRALSSLW +RPR+
Sbjct: 306 TTRQAARCFLAIAEYFHRLRALSSLWLARPRQ 337


>Glyma02g30090.1 
          Length = 244

 Score = 52.8 bits (125), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 22/32 (68%), Positives = 27/32 (84%)

Query: 1   TVRQAARCFLVIGEYYGRLRALSSLWASRPRE 32
           T RQAARC + I EY+ RLRALSSLW++RPR+
Sbjct: 211 TTRQAARCLVAISEYFHRLRALSSLWSTRPRQ 242


>Glyma10g12000.1 
          Length = 335

 Score = 50.8 bits (120), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 21/32 (65%), Positives = 26/32 (81%)

Query: 1   TVRQAARCFLVIGEYYGRLRALSSLWASRPRE 32
           T RQAARC + I EY+ RLRALSSLW++ PR+
Sbjct: 302 TTRQAARCLVAISEYFHRLRALSSLWSTHPRQ 333


>Glyma03g28320.1 
          Length = 460

 Score = 50.4 bits (119), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 21/32 (65%), Positives = 25/32 (78%)

Query: 1   TVRQAARCFLVIGEYYGRLRALSSLWASRPRE 32
           T RQ+AR  L I +Y+ RLRALSSLW +RPRE
Sbjct: 429 TTRQSARALLAISDYFSRLRALSSLWLARPRE 460


>Glyma19g31050.4 
          Length = 459

 Score = 50.4 bits (119), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 21/32 (65%), Positives = 25/32 (78%)

Query: 1   TVRQAARCFLVIGEYYGRLRALSSLWASRPRE 32
           T RQ+AR  L I +Y+ RLRALSSLW +RPRE
Sbjct: 428 TTRQSARALLAISDYFSRLRALSSLWLARPRE 459


>Glyma19g31050.3 
          Length = 459

 Score = 50.4 bits (119), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 21/32 (65%), Positives = 25/32 (78%)

Query: 1   TVRQAARCFLVIGEYYGRLRALSSLWASRPRE 32
           T RQ+AR  L I +Y+ RLRALSSLW +RPRE
Sbjct: 428 TTRQSARALLAISDYFSRLRALSSLWLARPRE 459


>Glyma19g31050.1 
          Length = 459

 Score = 50.4 bits (119), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 21/32 (65%), Positives = 25/32 (78%)

Query: 1   TVRQAARCFLVIGEYYGRLRALSSLWASRPRE 32
           T RQ+AR  L I +Y+ RLRALSSLW +RPRE
Sbjct: 428 TTRQSARALLAISDYFSRLRALSSLWLARPRE 459


>Glyma19g31050.2 
          Length = 425

 Score = 50.4 bits (119), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 21/32 (65%), Positives = 25/32 (78%)

Query: 1   TVRQAARCFLVIGEYYGRLRALSSLWASRPRE 32
           T RQ+AR  L I +Y+ RLRALSSLW +RPRE
Sbjct: 394 TTRQSARALLAISDYFSRLRALSSLWLARPRE 425


>Glyma03g28320.2 
          Length = 443

 Score = 50.4 bits (119), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 21/32 (65%), Positives = 25/32 (78%)

Query: 1   TVRQAARCFLVIGEYYGRLRALSSLWASRPRE 32
           T RQ+AR  L I +Y+ RLRALSSLW +RPRE
Sbjct: 412 TTRQSARALLAISDYFSRLRALSSLWLARPRE 443