Jatropha Genome Database

JcCA0029581.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0029581.20 - phase: 0 /pseudo/partial
         (212 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma07g40130.3                                                       280   6e-76
Glyma07g40130.1                                                       280   6e-76
Glyma07g40130.2                                                       278   2e-75
Glyma20g14970.1                                                       127   6e-30
Glyma07g29540.1                                                        73   2e-13
Glyma07g25160.1                                                        71   8e-13

>Glyma07g40130.3 
          Length = 286

 Score =  280 bits (717), Expect = 6e-76,   Method: Compositional matrix adjust.
 Identities = 132/170 (77%), Positives = 149/170 (87%), Gaps = 2/170 (1%)

Query: 45  RSSFPKGSDPAPPRITSNIKQNLQFLKLWKEFQKRKSSTPKPATSYRRKKVEKEELPEDT 104
           R    + S+  PPRITSN+KQNL+FLKLWK FQ R SSTP+P+TSYR+KKVEKE+   DT
Sbjct: 27  RKKQTQDSESTPPRITSNVKQNLRFLKLWKSFQNRNSSTPRPSTSYRKKKVEKEDDVVDT 86

Query: 105 ELYRDPTLSLYYTNQ--ILDNAVPVLLVDGYNVCGYWAKLKKHFMNGRLDIARQKLIDEL 162
           +LYRDPT SLYYTNQ  ILDNAVPVLLVDGYNVCGYW KLKKHF+ GRLDIARQKLIDEL
Sbjct: 87  DLYRDPTTSLYYTNQQGILDNAVPVLLVDGYNVCGYWMKLKKHFVKGRLDIARQKLIDEL 146

Query: 163 VTFSMLRDVKVVVVFDAMMSGLPTHKETFAGVDVVFSGESCADAWIXKEV 212
           +TFSMLR+VK+VVVFDAMMSGLPTHKE FAG+D++FSGE+CAD WI KEV
Sbjct: 147 LTFSMLREVKIVVVFDAMMSGLPTHKEDFAGLDIIFSGETCADTWIEKEV 196


>Glyma07g40130.1 
          Length = 286

 Score =  280 bits (717), Expect = 6e-76,   Method: Compositional matrix adjust.
 Identities = 132/170 (77%), Positives = 149/170 (87%), Gaps = 2/170 (1%)

Query: 45  RSSFPKGSDPAPPRITSNIKQNLQFLKLWKEFQKRKSSTPKPATSYRRKKVEKEELPEDT 104
           R    + S+  PPRITSN+KQNL+FLKLWK FQ R SSTP+P+TSYR+KKVEKE+   DT
Sbjct: 27  RKKQTQDSESTPPRITSNVKQNLRFLKLWKSFQNRNSSTPRPSTSYRKKKVEKEDDVVDT 86

Query: 105 ELYRDPTLSLYYTNQ--ILDNAVPVLLVDGYNVCGYWAKLKKHFMNGRLDIARQKLIDEL 162
           +LYRDPT SLYYTNQ  ILDNAVPVLLVDGYNVCGYW KLKKHF+ GRLDIARQKLIDEL
Sbjct: 87  DLYRDPTTSLYYTNQQGILDNAVPVLLVDGYNVCGYWMKLKKHFVKGRLDIARQKLIDEL 146

Query: 163 VTFSMLRDVKVVVVFDAMMSGLPTHKETFAGVDVVFSGESCADAWIXKEV 212
           +TFSMLR+VK+VVVFDAMMSGLPTHKE FAG+D++FSGE+CAD WI KEV
Sbjct: 147 LTFSMLREVKIVVVFDAMMSGLPTHKEDFAGLDIIFSGETCADTWIEKEV 196


>Glyma07g40130.2 
          Length = 236

 Score =  278 bits (712), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 132/170 (77%), Positives = 149/170 (87%), Gaps = 2/170 (1%)

Query: 45  RSSFPKGSDPAPPRITSNIKQNLQFLKLWKEFQKRKSSTPKPATSYRRKKVEKEELPEDT 104
           R    + S+  PPRITSN+KQNL+FLKLWK FQ R SSTP+P+TSYR+KKVEKE+   DT
Sbjct: 27  RKKQTQDSESTPPRITSNVKQNLRFLKLWKSFQNRNSSTPRPSTSYRKKKVEKEDDVVDT 86

Query: 105 ELYRDPTLSLYYTNQ--ILDNAVPVLLVDGYNVCGYWAKLKKHFMNGRLDIARQKLIDEL 162
           +LYRDPT SLYYTNQ  ILDNAVPVLLVDGYNVCGYW KLKKHF+ GRLDIARQKLIDEL
Sbjct: 87  DLYRDPTTSLYYTNQQGILDNAVPVLLVDGYNVCGYWMKLKKHFVKGRLDIARQKLIDEL 146

Query: 163 VTFSMLRDVKVVVVFDAMMSGLPTHKETFAGVDVVFSGESCADAWIXKEV 212
           +TFSMLR+VK+VVVFDAMMSGLPTHKE FAG+D++FSGE+CAD WI KEV
Sbjct: 147 LTFSMLREVKIVVVFDAMMSGLPTHKEDFAGLDIIFSGETCADTWIEKEV 196


>Glyma20g14970.1 
          Length = 273

 Score =  127 bits (320), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 63/85 (74%), Positives = 71/85 (83%), Gaps = 3/85 (3%)

Query: 113 SLYYTNQ--ILDNAVPVLLVDGYNVCGYWAKLKKHFMNGRLDIARQKLIDELVTFSMLRD 170
           S+ YTN   IL N VPV+LVDGYNVCGYW KLKK F+ GRLDIA QKLIDEL++FSMLR 
Sbjct: 65  SILYTNLQGILHNVVPVVLVDGYNVCGYWMKLKKDFVKGRLDIAHQKLIDELLSFSMLR- 123

Query: 171 VKVVVVFDAMMSGLPTHKETFAGVD 195
           VK+V+ FDAMMSGLPTHKE FAG+ 
Sbjct: 124 VKIVIFFDAMMSGLPTHKEDFAGLS 148


>Glyma07g29540.1 
          Length = 48

 Score = 73.2 bits (178), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 31/48 (64%), Positives = 38/48 (79%)

Query: 164 TFSMLRDVKVVVVFDAMMSGLPTHKETFAGVDVVFSGESCADAWIXKE 211
           +F +   VK+VVVFDAMMSGLPTHKE   G+D++FS E+CAD WI KE
Sbjct: 1   SFFIYTGVKIVVVFDAMMSGLPTHKEDITGLDIIFSSETCADTWIEKE 48


>Glyma07g25160.1 
          Length = 47

 Score = 71.2 bits (173), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 30/47 (63%), Positives = 37/47 (78%)

Query: 165 FSMLRDVKVVVVFDAMMSGLPTHKETFAGVDVVFSGESCADAWIXKE 211
           F +  +VK+VVVFDAMMSGLPTHKE   G+D++F  E+CAD WI KE
Sbjct: 1   FFIYTEVKIVVVFDAMMSGLPTHKEDITGLDIIFLSETCADTWIEKE 47