Jatropha Genome Database

JcCA0029471.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0029471.10 + phase: 1 /partial
         (110 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma05g08970.1                                                       144   2e-35
Glyma19g00430.1                                                       140   3e-34
Glyma15g11750.1                                                        95   1e-20
Glyma09g00910.1                                                        95   2e-20
Glyma13g00610.2                                                        50   7e-07
Glyma13g00610.1                                                        50   7e-07
Glyma17g06790.5                                                        49   1e-06

>Glyma05g08970.1 
          Length = 364

 Score =  144 bits (364), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 68/93 (73%), Positives = 76/93 (81%)

Query: 12  QEGLEGEITRRXXXXXXXXXXXXKDPERRGWHPVTYKFSDATPTLIKNIKDIDNIYYETE 71
           Q+GLE EITRR            ++ ERRGWHPVTYK+SDATP L+K +K+IDNIYYETE
Sbjct: 265 QKGLEEEITRRSLTHTSWDISNSREHERRGWHPVTYKYSDATPMLLKFVKEIDNIYYETE 324

Query: 72  YRKEWCSSKGKPSTCFLFARKFTRPAALRLLNM 104
           YR+EWCSSKGKPSTCFLFARKFTR AALRLLNM
Sbjct: 325 YRREWCSSKGKPSTCFLFARKFTRTAALRLLNM 357


>Glyma19g00430.1 
          Length = 365

 Score =  140 bits (353), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 66/93 (70%), Positives = 75/93 (80%)

Query: 12  QEGLEGEITRRXXXXXXXXXXXXKDPERRGWHPVTYKFSDATPTLIKNIKDIDNIYYETE 71
           Q+GLE EITRR            ++ +RRGWHPVTYK+SDATP L+  IK+IDNIY+ETE
Sbjct: 266 QKGLEEEITRRSLTHTSWDISNSREYDRRGWHPVTYKYSDATPMLLNFIKEIDNIYFETE 325

Query: 72  YRKEWCSSKGKPSTCFLFARKFTRPAALRLLNM 104
           YR+EWCSSKGKPSTCFLFARKFTR AALRLLNM
Sbjct: 326 YRREWCSSKGKPSTCFLFARKFTRTAALRLLNM 358


>Glyma15g11750.1 
          Length = 427

 Score = 95.1 bits (235), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 44/89 (49%), Positives = 59/89 (66%), Gaps = 1/89 (1%)

Query: 15  LEGEITRRXXXXXXXXXXXXKDPERRGWHPVTYKFSDATPTLIKNIKDIDNIYYETEYRK 74
           LEGE+ RR            K  E +GWHP+T+ +S+A+P  IK IK I+++YYETEYR 
Sbjct: 273 LEGELERRTLTYTLWNQSTTK-MENKGWHPITFGYSNASPQRIKEIKGINHVYYETEYRI 331

Query: 75  EWCSSKGKPSTCFLFARKFTRPAALRLLN 103
           EWC +      CFLFARKF++ AA+RLL+
Sbjct: 332 EWCHTNSTSVPCFLFARKFSQGAAMRLLS 360


>Glyma09g00910.1 
          Length = 377

 Score = 94.7 bits (234), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 44/89 (49%), Positives = 59/89 (66%), Gaps = 1/89 (1%)

Query: 15  LEGEITRRXXXXXXXXXXXXKDPERRGWHPVTYKFSDATPTLIKNIKDIDNIYYETEYRK 74
           LEGE+ RR            K  E +GWHP+T+ +S+A+P  IK IK I+++YYETEYR 
Sbjct: 273 LEGELERRTLTYTLWNQSTTK-MENKGWHPITFGYSNASPQRIKEIKGINHVYYETEYRI 331

Query: 75  EWCSSKGKPSTCFLFARKFTRPAALRLLN 103
           EWC +      CFLFARKF++ AA+RLL+
Sbjct: 332 EWCHTNSTSVPCFLFARKFSQGAAMRLLS 360


>Glyma13g00610.2 
          Length = 393

 Score = 49.7 bits (117), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 29/75 (38%), Positives = 41/75 (54%), Gaps = 5/75 (6%)

Query: 36  DPERRGWHPVTYKFSDATPTLIKNIKDID-NIYYETEYRKE---W-CSSKGKPSTCFLFA 90
           D   R WHP +Y+  D T  L+KNI  ID +++  ++ +KE   W C   G    C+LFA
Sbjct: 313 DWSERKWHPKSYRAQDVTYELLKNITSIDVSVHVTSDEKKEVQSWPCLWNGIQKPCYLFA 372

Query: 91  RKFTRPAALRLLNMV 105
           RKFT      LL ++
Sbjct: 373 RKFTPETMDSLLRLL 387


>Glyma13g00610.1 
          Length = 393

 Score = 49.7 bits (117), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 29/75 (38%), Positives = 41/75 (54%), Gaps = 5/75 (6%)

Query: 36  DPERRGWHPVTYKFSDATPTLIKNIKDID-NIYYETEYRKE---W-CSSKGKPSTCFLFA 90
           D   R WHP +Y+  D T  L+KNI  ID +++  ++ +KE   W C   G    C+LFA
Sbjct: 313 DWSERKWHPKSYRAQDVTYELLKNITSIDVSVHVTSDEKKEVQSWPCLWNGIQKPCYLFA 372

Query: 91  RKFTRPAALRLLNMV 105
           RKFT      LL ++
Sbjct: 373 RKFTPETMDSLLRLL 387


>Glyma17g06790.5 
          Length = 393

 Score = 48.9 bits (115), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/75 (38%), Positives = 41/75 (54%), Gaps = 5/75 (6%)

Query: 36  DPERRGWHPVTYKFSDATPTLIKNIKDID-NIYYETEYRKE---W-CSSKGKPSTCFLFA 90
           D   R WHP +Y+  D T  L+KNI  ID +++  ++ +KE   W C   G    C+LFA
Sbjct: 313 DWSERKWHPKSYRAQDVTYELLKNITSIDVSMHVTSDEKKEVQSWPCLWNGIQKPCYLFA 372

Query: 91  RKFTRPAALRLLNMV 105
           RKFT      LL ++
Sbjct: 373 RKFTPETLDSLLRLL 387