Jatropha Genome Database

JcCA0029371.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0029371.10 + phase: 0 /pseudo/partial
         (178 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma03g24280.2                                                       212   1e-55
Glyma07g12660.2                                                       212   2e-55
Glyma03g24280.3                                                       204   5e-53
Glyma05g06110.1                                                       204   5e-53
Glyma03g24280.1                                                       203   7e-53
Glyma07g12660.1                                                       203   1e-52
Glyma17g16400.2                                                       202   1e-52
Glyma17g16400.1                                                       202   1e-52
Glyma17g16400.3                                                       202   1e-52

>Glyma03g24280.2 
          Length = 398

 Score =  212 bits (540), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 100/104 (96%), Positives = 103/104 (99%)

Query: 74  GDVKGKVAVMVDDMIDTAGTITKGAALLHQEGAREVYACSTHAVFSPPAIERLSSGLFQE 133
           GDV+GKVAVMVDDMIDTAGTI KGAALLHQEGAREVYAC+THAVFSPPAIERLSSGLFQE
Sbjct: 294 GDVRGKVAVMVDDMIDTAGTIAKGAALLHQEGAREVYACTTHAVFSPPAIERLSSGLFQE 353

Query: 134 VIITNTIPVAEQNYFPQLTVLSVANLLGETIWRVHDDCSVSSIF 177
           VIITNTIPVAEQNYFPQLTVLSVANLLGET+WRVHDDCSVSSIF
Sbjct: 354 VIITNTIPVAEQNYFPQLTVLSVANLLGETVWRVHDDCSVSSIF 397


>Glyma07g12660.2 
          Length = 396

 Score =  212 bits (539), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 100/104 (96%), Positives = 103/104 (99%)

Query: 74  GDVKGKVAVMVDDMIDTAGTITKGAALLHQEGAREVYACSTHAVFSPPAIERLSSGLFQE 133
           GDV+GKVAVMVDDMIDTAGTI KGAALLHQEGAREVYAC+THAVFSPPAIERLSSGLFQE
Sbjct: 292 GDVRGKVAVMVDDMIDTAGTIAKGAALLHQEGAREVYACTTHAVFSPPAIERLSSGLFQE 351

Query: 134 VIITNTIPVAEQNYFPQLTVLSVANLLGETIWRVHDDCSVSSIF 177
           VIITNTIPVAEQNYFPQLTVLSVANLLGET+WRVHDDCSVSSIF
Sbjct: 352 VIITNTIPVAEQNYFPQLTVLSVANLLGETVWRVHDDCSVSSIF 395


>Glyma03g24280.3 
          Length = 397

 Score =  204 bits (518), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 95/103 (92%), Positives = 101/103 (98%)

Query: 74  GDVKGKVAVMVDDMIDTAGTITKGAALLHQEGAREVYACSTHAVFSPPAIERLSSGLFQE 133
           GDV+GKVAVMVDDMIDTAGTI KGAALLHQEGAREVYAC+THAVFSPPAIERLSSGLFQE
Sbjct: 294 GDVRGKVAVMVDDMIDTAGTIAKGAALLHQEGAREVYACTTHAVFSPPAIERLSSGLFQE 353

Query: 134 VIITNTIPVAEQNYFPQLTVLSVANLLGETIWRVHDDCSVSSI 176
           VIITNTIPVAEQNYFPQLTVLSVANLLGET+WRVHDDCS+ ++
Sbjct: 354 VIITNTIPVAEQNYFPQLTVLSVANLLGETVWRVHDDCSLMTL 396


>Glyma05g06110.1 
          Length = 393

 Score =  204 bits (518), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 96/105 (91%), Positives = 100/105 (95%)

Query: 74  GDVKGKVAVMVDDMIDTAGTITKGAALLHQEGAREVYACSTHAVFSPPAIERLSSGLFQE 133
           GDVKGKVAVMVDDMIDTAGTI KGAALLH+EGAREVYAC THAVFSPPAIERLS GLF E
Sbjct: 289 GDVKGKVAVMVDDMIDTAGTIAKGAALLHEEGAREVYACCTHAVFSPPAIERLSGGLFHE 348

Query: 134 VIITNTIPVAEQNYFPQLTVLSVANLLGETIWRVHDDCSVSSIFQ 178
           VIITNTIPVAE+NYFPQLT+L+VANLLGETIWRVHDD SVSSIFQ
Sbjct: 349 VIITNTIPVAEKNYFPQLTILTVANLLGETIWRVHDDSSVSSIFQ 393


>Glyma03g24280.1 
          Length = 404

 Score =  203 bits (517), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 95/99 (95%), Positives = 98/99 (98%)

Query: 74  GDVKGKVAVMVDDMIDTAGTITKGAALLHQEGAREVYACSTHAVFSPPAIERLSSGLFQE 133
           GDV+GKVAVMVDDMIDTAGTI KGAALLHQEGAREVYAC+THAVFSPPAIERLSSGLFQE
Sbjct: 294 GDVRGKVAVMVDDMIDTAGTIAKGAALLHQEGAREVYACTTHAVFSPPAIERLSSGLFQE 353

Query: 134 VIITNTIPVAEQNYFPQLTVLSVANLLGETIWRVHDDCS 172
           VIITNTIPVAEQNYFPQLTVLSVANLLGET+WRVHDDCS
Sbjct: 354 VIITNTIPVAEQNYFPQLTVLSVANLLGETVWRVHDDCS 392


>Glyma07g12660.1 
          Length = 402

 Score =  203 bits (516), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 95/99 (95%), Positives = 98/99 (98%)

Query: 74  GDVKGKVAVMVDDMIDTAGTITKGAALLHQEGAREVYACSTHAVFSPPAIERLSSGLFQE 133
           GDV+GKVAVMVDDMIDTAGTI KGAALLHQEGAREVYAC+THAVFSPPAIERLSSGLFQE
Sbjct: 292 GDVRGKVAVMVDDMIDTAGTIAKGAALLHQEGAREVYACTTHAVFSPPAIERLSSGLFQE 351

Query: 134 VIITNTIPVAEQNYFPQLTVLSVANLLGETIWRVHDDCS 172
           VIITNTIPVAEQNYFPQLTVLSVANLLGET+WRVHDDCS
Sbjct: 352 VIITNTIPVAEQNYFPQLTVLSVANLLGETVWRVHDDCS 390


>Glyma17g16400.2 
          Length = 352

 Score =  202 bits (515), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 95/105 (90%), Positives = 101/105 (96%)

Query: 74  GDVKGKVAVMVDDMIDTAGTITKGAALLHQEGAREVYACSTHAVFSPPAIERLSSGLFQE 133
           GDVKGKVAVMVDDMIDTAGTI +GAALLH+EGAREVYAC THAVFSPPAIERLSSGLF E
Sbjct: 248 GDVKGKVAVMVDDMIDTAGTIAEGAALLHEEGAREVYACCTHAVFSPPAIERLSSGLFHE 307

Query: 134 VIITNTIPVAEQNYFPQLTVLSVANLLGETIWRVHDDCSVSSIFQ 178
           VIITNTIPVAE+NYFPQLT+++VANLLGETIWRVHDD SVSSIFQ
Sbjct: 308 VIITNTIPVAEKNYFPQLTIITVANLLGETIWRVHDDSSVSSIFQ 352


>Glyma17g16400.1 
          Length = 406

 Score =  202 bits (515), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 95/105 (90%), Positives = 101/105 (96%)

Query: 74  GDVKGKVAVMVDDMIDTAGTITKGAALLHQEGAREVYACSTHAVFSPPAIERLSSGLFQE 133
           GDVKGKVAVMVDDMIDTAGTI +GAALLH+EGAREVYAC THAVFSPPAIERLSSGLF E
Sbjct: 302 GDVKGKVAVMVDDMIDTAGTIAEGAALLHEEGAREVYACCTHAVFSPPAIERLSSGLFHE 361

Query: 134 VIITNTIPVAEQNYFPQLTVLSVANLLGETIWRVHDDCSVSSIFQ 178
           VIITNTIPVAE+NYFPQLT+++VANLLGETIWRVHDD SVSSIFQ
Sbjct: 362 VIITNTIPVAEKNYFPQLTIITVANLLGETIWRVHDDSSVSSIFQ 406


>Glyma17g16400.3 
          Length = 405

 Score =  202 bits (515), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 95/105 (90%), Positives = 101/105 (96%)

Query: 74  GDVKGKVAVMVDDMIDTAGTITKGAALLHQEGAREVYACSTHAVFSPPAIERLSSGLFQE 133
           GDVKGKVAVMVDDMIDTAGTI +GAALLH+EGAREVYAC THAVFSPPAIERLSSGLF E
Sbjct: 301 GDVKGKVAVMVDDMIDTAGTIAEGAALLHEEGAREVYACCTHAVFSPPAIERLSSGLFHE 360

Query: 134 VIITNTIPVAEQNYFPQLTVLSVANLLGETIWRVHDDCSVSSIFQ 178
           VIITNTIPVAE+NYFPQLT+++VANLLGETIWRVHDD SVSSIFQ
Sbjct: 361 VIITNTIPVAEKNYFPQLTIITVANLLGETIWRVHDDSSVSSIFQ 405