Jatropha Genome Database

JcCA0029051.30
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0029051.30 + phase: 0 /partial
         (354 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma15g03900.1                                                       266   2e-71
Glyma13g41490.1                                                       265   8e-71
Glyma12g35760.1                                                        53   6e-07
Glyma08g09120.1                                                        52   7e-07
Glyma05g26180.1                                                        51   2e-06
Glyma13g34640.1                                                        51   2e-06

>Glyma15g03900.1 
          Length = 796

 Score =  266 bits (681), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 150/296 (50%), Positives = 182/296 (61%), Gaps = 41/296 (13%)

Query: 59  MADSPRITLRSPSKKPK---QTPPLSSICLTPRTPQVVDPPXXXXXXXXXXXDQITTPQK 115
           MA +P   L++PSK PK   Q+ P SS  +TP TPQ + P            D       
Sbjct: 1   MAATPSKFLQTPSK-PKLRSQSNPKSSPVVTPDTPQTLYPRRSTRAKIRRSID------- 52

Query: 116 CASQLKKPIEDSLKIRRNSRKNGSIKTPESKRDTESTXXXXXXXXXXNIEVSFSPVSPDQ 175
           C  Q     ED     + S KN   K P      +            +IEVSF+PV+P  
Sbjct: 53  CVDQ--DSGEDKATTSKISDKN---KAPVVDASKKKKNGKN------SIEVSFAPVTP-- 99

Query: 176 LDTXXXXXXXXXXXXMMTRAMASKNAKSEQKGNRKRVYYKKVVYDGGEFEVGDDVYVKRR 235
                              +  +   K E +G  +RVYY KVVYDGGEFE+GDDVYVKRR
Sbjct: 100 -----------------ASSEKASTRKREGEGGVRRVYYTKVVYDGGEFELGDDVYVKRR 142

Query: 236 EDASSDDEDPEVEECRVCFKAGKAVMLECDDCLGGFHLKCLKPPLKEVPEGDWICGFCEA 295
           EDASSDDEDPE+EECR+CF +   VM+ECDDCLGGFHLKCL+PPLK+VPEGDWICGFCEA
Sbjct: 143 EDASSDDEDPEMEECRMCFSSNDEVMIECDDCLGGFHLKCLRPPLKDVPEGDWICGFCEA 202

Query: 296 RKLGKEVELPKSPEGKKRSRTLREKLLSSDLWAVRIESLWKEVDGSYWFKGRWYII 351
           RK+G EV+LPK P+GKK  RT+REKLLSSDLW+ RI+S+W+EVD +YW + RWY I
Sbjct: 203 RKMGMEVQLPKPPKGKKLVRTMREKLLSSDLWSGRIKSIWREVDDNYWCRVRWYTI 258


>Glyma13g41490.1 
          Length = 851

 Score =  265 bits (676), Expect = 8e-71,   Method: Compositional matrix adjust.
 Identities = 149/327 (45%), Positives = 192/327 (58%), Gaps = 62/327 (18%)

Query: 59  MADSPRITLRSPS--KKPKQTPPLSSICLTPRTPQVVD----------------PPXXXX 100
           MA +P  + ++PS  K   ++ P SS  +TP TPQ +                 PP    
Sbjct: 1   MAATPSKSFQTPSNPKLRSKSNPKSSPAVTPDTPQTLHIRRSTRAKSLLFDAPKPPHSPL 60

Query: 101 XXXXXXXDQIT--------------TPQKCASQLKKPIEDSLKIRRNSRKNGSIKTPESK 146
                   + T              TP K + + K P+ D+ K     +KNG        
Sbjct: 61  QISLTTPKRRTRRSIVEEDSAEDKATPSKISPKNKAPVVDASK-----KKNG-------- 107

Query: 147 RDTESTXXXXXXXXXXNIEVSFSPVSPDQLDTXXXXXXXXXXXXMMTRAMASKNAKSEQK 206
                           +IE  F+PV+P   +             +++RA   K+   E+ 
Sbjct: 108 --------------KSSIEFFFAPVTPASSE-KASTRKREGEGGVVSRAKRGKSENREKS 152

Query: 207 GN--RKRVYYKKVVYDGGEFEVGDDVYVKRREDASSDDEDPEVEECRVCFKAGKAVMLEC 264
               ++RVYYKKV+YDGGEFE+GDDVYVKRREDASSDDEDPE+EECR+CF +   VM+EC
Sbjct: 153 AKLPQRRVYYKKVIYDGGEFELGDDVYVKRREDASSDDEDPEMEECRMCFSSNDEVMIEC 212

Query: 265 DDCLGGFHLKCLKPPLKEVPEGDWICGFCEARKLGKEVELPKSPEGKKRSRTLREKLLSS 324
           DDCLGGFHLKCL+PPLK+VPEGDWICGFCEARK+GKEV+LPK P+GKK  RT+REKLLSS
Sbjct: 213 DDCLGGFHLKCLRPPLKDVPEGDWICGFCEARKMGKEVQLPKPPKGKKLVRTMREKLLSS 272

Query: 325 DLWAVRIESLWKEVDGSYWFKGRWYII 351
           DLW+ R+ES+W+EVDG+YW + RWY I
Sbjct: 273 DLWSGRVESIWREVDGNYWCRVRWYTI 299


>Glyma12g35760.1 
          Length = 1259

 Score = 52.8 bits (125), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 4/63 (6%)

Query: 240 SDDEDPEVEECRVCFKAGKAVMLECDDCLGGFHLKCLKPPLKEVPEGDWICGFCEARKLG 299
           +DD D   + C +C + G+  ++ CD+C   FHL CL    +E+P+GDW C  C  R  G
Sbjct: 739 ADDNDKNDDSCGLCGEGGE--LICCDNCPSTFHLACLST--QEIPDGDWYCTNCTCRICG 794

Query: 300 KEV 302
             V
Sbjct: 795 NLV 797


>Glyma08g09120.1 
          Length = 2212

 Score = 52.4 bits (124), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 29/70 (41%), Positives = 38/70 (54%), Gaps = 7/70 (10%)

Query: 249 ECRVCFKAGKAVMLECDDCLGGFHLKCLKPPLKEVPEGDWICGFCEARKLGKEVELPKSP 308
           EC +C   G   +L CD C   +HL+CL PPLK +P G W C  C     GK+  +PK+ 
Sbjct: 10  ECVICDVGGN--LLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPSCFE---GKDQLMPKNH 64

Query: 309 EG--KKRSRT 316
                KR+RT
Sbjct: 65  LDPISKRART 74


>Glyma05g26180.1 
          Length = 2340

 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 21/45 (46%), Positives = 26/45 (57%), Gaps = 2/45 (4%)

Query: 249 ECRVCFKAGKAVMLECDDCLGGFHLKCLKPPLKEVPEGDWICGFC 293
           EC +C   G   +L CD C   +HL+CL PPLK +P G W C  C
Sbjct: 82  ECVICDVGGN--LLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPSC 124


>Glyma13g34640.1 
          Length = 1155

 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 4/63 (6%)

Query: 240 SDDEDPEVEECRVCFKAGKAVMLECDDCLGGFHLKCLKPPLKEVPEGDWICGFCEARKLG 299
           +D+ D   + C +C + G+  ++ CD+C   FHL CL    +E+P+GDW C  C  R  G
Sbjct: 633 ADENDKNDDSCGLCGEGGE--LICCDNCPSTFHLACLST--QEIPDGDWYCTNCTCRICG 688

Query: 300 KEV 302
             V
Sbjct: 689 NLV 691