Jatropha Genome Database

JcCA0029051.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0029051.10 + phase: 1 /partial
         (55 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma12g06150.1                                                        80   7e-16

>Glyma12g06150.1 
          Length = 632

 Score = 79.7 bits (195), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 36/43 (83%), Positives = 38/43 (88%)

Query: 1   FPETYRRYMEKQLRSDIGFSGTPIRLLWRSRRKMEKSEGQYTT 43
           FPETYRRYMEKQLR+D GFSGTPIRLLWRSRRKM K EG+  T
Sbjct: 572 FPETYRRYMEKQLRTDAGFSGTPIRLLWRSRRKMGKDEGKPVT 614