Jatropha Genome Database

JcCA0028741.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0028741.10 - phase: 0 
         (193 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma10g35560.1                                                       314   4e-86
Glyma20g31980.1                                                       312   1e-85
Glyma10g35560.2                                                       251   3e-67

>Glyma10g35560.1 
          Length = 436

 Score =  314 bits (804), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 148/181 (81%), Positives = 162/181 (89%)

Query: 1   MIAAVDAIRVKGDSIGGVVTCIVRNAPCGLGSPVFDKLEAEFAKALLSLPASKGFEVGSG 60
           MI+A+DA+RV+GDS+GGVVTCIVRN P GLGSPVFDKLEAE AKA +SLPA+KGF+ GSG
Sbjct: 245 MISAIDAVRVRGDSVGGVVTCIVRNCPRGLGSPVFDKLEAELAKAAMSLPATKGFQFGSG 304

Query: 61  FAGTFLTGSEHNDEFYLDEHGKIRTRRNRSGGIQEGISNGEIIKMRVAFKPTATISKKQN 120
           FAGTFLTGSEHNDEFY+DEHG  RTR NRSGGIQ GISNGEII MR+AFKPT+TI KKQN
Sbjct: 305 FAGTFLTGSEHNDEFYIDEHGNTRTRTNRSGGIQGGISNGEIINMRIAFKPTSTIGKKQN 364

Query: 121 TVTRDRMEIELIACGRHDPCVVPRAVPMVEAMVALVLVDQLMAHHAQCGLFPINPMLQEP 180
           TVTRD+ E E IA GRHDPCVVPRAVPMVEAMVALVLVDQLMA +AQC LFP+N  LQEP
Sbjct: 365 TVTRDKKETEFIARGRHDPCVVPRAVPMVEAMVALVLVDQLMAQYAQCNLFPVNSDLQEP 424

Query: 181 L 181
           L
Sbjct: 425 L 425


>Glyma20g31980.1 
          Length = 435

 Score =  312 bits (799), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 147/181 (81%), Positives = 161/181 (88%)

Query: 1   MIAAVDAIRVKGDSIGGVVTCIVRNAPCGLGSPVFDKLEAEFAKALLSLPASKGFEVGSG 60
           MI+A+DA+RV+GDS+GGVVTCIVRN P GLGSPVFDKLEAE AKA +SLPA+KGF+ GSG
Sbjct: 244 MISAIDAVRVRGDSVGGVVTCIVRNCPRGLGSPVFDKLEAELAKAAMSLPATKGFQFGSG 303

Query: 61  FAGTFLTGSEHNDEFYLDEHGKIRTRRNRSGGIQEGISNGEIIKMRVAFKPTATISKKQN 120
           FAGTFLTGSEHNDEFY+DEHG  RTR NRSGGIQ GISNGEII MR+AFKPT+TI KKQ 
Sbjct: 304 FAGTFLTGSEHNDEFYIDEHGNTRTRTNRSGGIQGGISNGEIINMRIAFKPTSTIGKKQK 363

Query: 121 TVTRDRMEIELIACGRHDPCVVPRAVPMVEAMVALVLVDQLMAHHAQCGLFPINPMLQEP 180
           TVTRD+ E E IA GRHDPCVVPRAVPMVEAMVALVLVDQLMA +AQC LFP+N  LQEP
Sbjct: 364 TVTRDKKETEFIARGRHDPCVVPRAVPMVEAMVALVLVDQLMAQYAQCNLFPVNSDLQEP 423

Query: 181 L 181
           L
Sbjct: 424 L 424


>Glyma10g35560.2 
          Length = 389

 Score =  251 bits (641), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 117/145 (80%), Positives = 129/145 (88%)

Query: 1   MIAAVDAIRVKGDSIGGVVTCIVRNAPCGLGSPVFDKLEAEFAKALLSLPASKGFEVGSG 60
           MI+A+DA+RV+GDS+GGVVTCIVRN P GLGSPVFDKLEAE AKA +SLPA+KGF+ GSG
Sbjct: 245 MISAIDAVRVRGDSVGGVVTCIVRNCPRGLGSPVFDKLEAELAKAAMSLPATKGFQFGSG 304

Query: 61  FAGTFLTGSEHNDEFYLDEHGKIRTRRNRSGGIQEGISNGEIIKMRVAFKPTATISKKQN 120
           FAGTFLTGSEHNDEFY+DEHG  RTR NRSGGIQ GISNGEII MR+AFKPT+TI KKQN
Sbjct: 305 FAGTFLTGSEHNDEFYIDEHGNTRTRTNRSGGIQGGISNGEIINMRIAFKPTSTIGKKQN 364

Query: 121 TVTRDRMEIELIACGRHDPCVVPRA 145
           TVTRD+ E E IA GRHDPCVVPR 
Sbjct: 365 TVTRDKKETEFIARGRHDPCVVPRG 389