Jatropha Genome Database

JcCA0025111.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0025111.10 + phase: 1 /pseudo/partial
         (412 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma07g08810.1                                                       443   e-124
Glyma03g02170.1                                                       229   4e-60
Glyma03g02160.1                                                       196   6e-50
Glyma04g03590.1                                                        79   9e-15
Glyma06g03680.1                                                        79   9e-15
Glyma04g03590.3                                                        78   2e-14
Glyma06g03680.2                                                        77   2e-14
Glyma06g03680.3                                                        75   1e-13
Glyma04g03590.2                                                        72   2e-12

>Glyma07g08810.1 
          Length = 526

 Score =  443 bits (1139), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 215/319 (67%), Positives = 256/319 (80%), Gaps = 3/319 (0%)

Query: 81  RFSQSSRKQAVNEIKRKASCDRFPRVLLFPEGTTTNGKVIISFQLGAFIPGFAIQPVIVR 140
           RF  SSRKQAV EIKR+ASCD+FPRVLLFPEGTTTNG+ +ISFQLGAFIPG+ IQPVI+R
Sbjct: 199 RFLPSSRKQAVREIKRRASCDKFPRVLLFPEGTTTNGRNLISFQLGAFIPGYPIQPVIIR 258

Query: 141 YPHVHFDQSWGHISLAKLMIRMFTQFHNFMEVEYLPIVSPLDNCKENPAHFAKRASHAIA 200
           YPHVHFDQSWG++SL KLM RMFTQFHNF EVEYLP++ PLD+ KE   HF +R S AIA
Sbjct: 259 YPHVHFDQSWGNVSLGKLMFRMFTQFHNFFEVEYLPVIYPLDD-KETAVHFRERTSRAIA 317

Query: 201 SALNVVQTFHSYGDLMLLMKASESNKEKPSSFMVEMAKVESLFHISSLEAVDFLDKFLSM 260
           +ALN VQT HSYGD+ML MKA E+ K+ PSSFMVEM KVESLFHISS EAVDFLDKFL+M
Sbjct: 318 TALNAVQTGHSYGDIMLHMKAQEA-KQNPSSFMVEMTKVESLFHISSTEAVDFLDKFLAM 376

Query: 261 NPNASGRVNFSDFVRVMRLRACPLSEEIFGFIDVEKSGSITFKQFLYGSVHVMKQPLFRQ 320
           NP+ SGRV + DF+RV+RL+ACPLS +IF FIDVEKSG+ITF+QFLYGS HVM QP F Q
Sbjct: 377 NPDPSGRVQYHDFLRVLRLKACPLSAKIFSFIDVEKSGTITFRQFLYGSAHVMSQPGFDQ 436

Query: 321 TCELAFSKCSDR-GDRISREQLGDMVRLAIPDLDDEEVQELFKLFDTDGDGWVGKDNFIS 379
           T E AF+ C       +  ++L D ++ AI +  ++EV E F LFD D DG + K++F+S
Sbjct: 437 TFEEAFAGCGGAVKTYVVEQELRDFIQPAILNWSEDEVHEFFMLFDNDNDGRIDKNDFLS 496

Query: 380 CLRKNPLLIALFSSCSMRK 398
           CLR+NPLLIA F+    +K
Sbjct: 497 CLRRNPLLIAFFTPQPQQK 515


>Glyma03g02170.1 
          Length = 195

 Score =  229 bits (584), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 110/178 (61%), Positives = 138/178 (77%), Gaps = 1/178 (0%)

Query: 216 MLLMKASESNKEKPSSFMVEMAKVESLFHISSLEAVDFLDKFLSMNPNASGRVNFSDFVR 275
           ML MKA E+ +E PSSFMVEM KVESLFHISS+EAVDFLDKFL+MNP++SGRV + DF+R
Sbjct: 1   MLHMKAQEAKQENPSSFMVEMTKVESLFHISSMEAVDFLDKFLAMNPDSSGRVQYHDFLR 60

Query: 276 VMRLRACPLSEEIFGFIDVEKSGSITFKQFLYGSVHVMKQPLFRQTCELAFSKCSDR-GD 334
           V+RL+ACPLS +IF FIDVEKSG+ITF+QFLYGS HVM QP F Q CE AF+ C      
Sbjct: 61  VLRLKACPLSAKIFSFIDVEKSGTITFRQFLYGSAHVMSQPGFHQACEEAFAGCGGAVKA 120

Query: 335 RISREQLGDMVRLAIPDLDDEEVQELFKLFDTDGDGWVGKDNFISCLRKNPLLIALFS 392
            +  ++L D ++  I +  ++EV ELF +FD D DG + K++F+SCLRK PLLIA F+
Sbjct: 121 YVVEQELRDFIQPVILNWSEDEVHELFMVFDNDNDGRIDKNDFLSCLRKTPLLIAFFT 178


>Glyma03g02160.1 
          Length = 283

 Score =  196 bits (497), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 90/114 (78%), Positives = 100/114 (87%), Gaps = 1/114 (0%)

Query: 81  RFSQSSRKQAVNEIKRKASCDRFPRVLLFPEGTTTNGKVIISFQLGAFIPGFAIQPVIVR 140
           RF  SSRKQAV EIKR+ASC+RFPRVLLFPEGTTTNG+ +ISFQLGAFIPG+ IQPVIVR
Sbjct: 171 RFLPSSRKQAVREIKRRASCNRFPRVLLFPEGTTTNGRNLISFQLGAFIPGYPIQPVIVR 230

Query: 141 YPHVHFDQSWGHISLAKLMIRMFTQFHNFMEVEYLPIVSPLDNCKENPAHFAKR 194
           YPHVHFDQSWGH+SL KLM RMFTQFHNF EVEYLP++ PLD+ KE   HF +R
Sbjct: 231 YPHVHFDQSWGHVSLGKLMFRMFTQFHNFFEVEYLPVIYPLDD-KETAVHFRER 283


>Glyma04g03590.1 
          Length = 377

 Score = 79.0 bits (193), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 71/140 (50%)

Query: 91  VNEIKRKASCDRFPRVLLFPEGTTTNGKVIISFQLGAFIPGFAIQPVIVRYPHVHFDQSW 150
            + I+     +  P ++LFPEGTTTNG+ ++ F+ G F+    + PVI++Y +  F  +W
Sbjct: 231 TDRIREAHQNESAPLMMLFPEGTTTNGEFLLPFKTGGFLAKAPVLPVILQYHYQRFSPAW 290

Query: 151 GHISLAKLMIRMFTQFHNFMEVEYLPIVSPLDNCKENPAHFAKRASHAIASALNVVQTFH 210
             IS  + +I +  QF N+MEV  LP+  P     ++P  +A      +A+  N++ +  
Sbjct: 291 DSISGVRHVIFLLCQFVNYMEVIRLPVYHPSQQEMDDPKLYANNVRRLMATEGNLILSDI 350

Query: 211 SYGDLMLLMKASESNKEKPS 230
              +  +   A   N   PS
Sbjct: 351 GLAEKRIYHAALNGNNSLPS 370


>Glyma06g03680.1 
          Length = 378

 Score = 79.0 bits (193), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 70/140 (50%)

Query: 91  VNEIKRKASCDRFPRVLLFPEGTTTNGKVIISFQLGAFIPGFAIQPVIVRYPHVHFDQSW 150
            + I+     +  P ++LFPEGTTTNG+ ++ F+ G F+    + PVI+RY +  F  +W
Sbjct: 232 TDRIQEAHQNESAPLMMLFPEGTTTNGEFLLPFKTGGFLAKAPVLPVILRYHYQRFSPAW 291

Query: 151 GHISLAKLMIRMFTQFHNFMEVEYLPIVSPLDNCKENPAHFAKRASHAIASALNVVQTFH 210
             IS  + +I +  QF N+MEV  +P+  P      +P  +A      +A+  N++ +  
Sbjct: 292 DSISGVRHVIFLLCQFVNYMEVIRVPVYHPSQQEMNDPKLYANNVRRLMATEGNLILSDI 351

Query: 211 SYGDLMLLMKASESNKEKPS 230
              +  +   A   N   PS
Sbjct: 352 GLAEKRIYHAALNGNNSMPS 371


>Glyma04g03590.3 
          Length = 369

 Score = 78.2 bits (191), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 37/116 (31%), Positives = 64/116 (55%)

Query: 91  VNEIKRKASCDRFPRVLLFPEGTTTNGKVIISFQLGAFIPGFAIQPVIVRYPHVHFDQSW 150
            + I+     +  P ++LFPEGTTTNG+ ++ F+ G F+    + PVI++Y +  F  +W
Sbjct: 231 TDRIREAHQNESAPLMMLFPEGTTTNGEFLLPFKTGGFLAKAPVLPVILQYHYQRFSPAW 290

Query: 151 GHISLAKLMIRMFTQFHNFMEVEYLPIVSPLDNCKENPAHFAKRASHAIASALNVV 206
             IS  + +I +  QF N+MEV  LP+  P     ++P  +A      +A+  N++
Sbjct: 291 DSISGVRHVIFLLCQFVNYMEVIRLPVYHPSQQEMDDPKLYANNVRRLMATEGNLI 346


>Glyma06g03680.2 
          Length = 370

 Score = 77.4 bits (189), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 37/116 (31%), Positives = 63/116 (54%)

Query: 91  VNEIKRKASCDRFPRVLLFPEGTTTNGKVIISFQLGAFIPGFAIQPVIVRYPHVHFDQSW 150
            + I+     +  P ++LFPEGTTTNG+ ++ F+ G F+    + PVI+RY +  F  +W
Sbjct: 232 TDRIQEAHQNESAPLMMLFPEGTTTNGEFLLPFKTGGFLAKAPVLPVILRYHYQRFSPAW 291

Query: 151 GHISLAKLMIRMFTQFHNFMEVEYLPIVSPLDNCKENPAHFAKRASHAIASALNVV 206
             IS  + +I +  QF N+MEV  +P+  P      +P  +A      +A+  N++
Sbjct: 292 DSISGVRHVIFLLCQFVNYMEVIRVPVYHPSQQEMNDPKLYANNVRRLMATEGNLI 347


>Glyma06g03680.3 
          Length = 362

 Score = 75.5 bits (184), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 35/100 (35%), Positives = 57/100 (57%)

Query: 104 PRVLLFPEGTTTNGKVIISFQLGAFIPGFAIQPVIVRYPHVHFDQSWGHISLAKLMIRMF 163
           P ++LFPEGTTTNG+ ++ F+ G F+    + PVI+RY +  F  +W  IS  + +I + 
Sbjct: 245 PLMMLFPEGTTTNGEFLLPFKTGGFLAKAPVLPVILRYHYQRFSPAWDSISGVRHVIFLL 304

Query: 164 TQFHNFMEVEYLPIVSPLDNCKENPAHFAKRASHAIASAL 203
            QF N+MEV  +P+  P      +P  +A      +A+ +
Sbjct: 305 CQFVNYMEVIRVPVYHPSQQEMNDPKLYANNVRRLMATEV 344


>Glyma04g03590.2 
          Length = 368

 Score = 71.6 bits (174), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 36/116 (31%), Positives = 63/116 (54%), Gaps = 1/116 (0%)

Query: 91  VNEIKRKASCDRFPRVLLFPEGTTTNGKVIISFQLGAFIPGFAIQPVIVRYPHVHFDQSW 150
            + I+     +  P ++LFP GTTTNG+ ++ F+ G F+    + PVI++Y +  F  +W
Sbjct: 231 TDRIREAHQNESAPLMMLFP-GTTTNGEFLLPFKTGGFLAKAPVLPVILQYHYQRFSPAW 289

Query: 151 GHISLAKLMIRMFTQFHNFMEVEYLPIVSPLDNCKENPAHFAKRASHAIASALNVV 206
             IS  + +I +  QF N+MEV  LP+  P     ++P  +A      +A+  N++
Sbjct: 290 DSISGVRHVIFLLCQFVNYMEVIRLPVYHPSQQEMDDPKLYANNVRRLMATEGNLI 345