Jatropha Genome Database
- JcCA0022221.40
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0022221.40 - phase: 0 /pseudo/partial
(124 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma08g47410.1 86 7e-18
Glyma08g47400.2 60 4e-10
Glyma18g38710.1 60 4e-10
Glyma18g38700.1 60 5e-10
Glyma08g47400.1 60 5e-10
Glyma08g47380.1 60 5e-10
Glyma18g38690.1 60 6e-10
Glyma18g38660.1 59 1e-09
Glyma08g47390.1 59 2e-09
Glyma08g46820.1 57 4e-09
Glyma18g40070.1 57 5e-09
Glyma07g16080.1 57 6e-09
Glyma11g14600.1 57 7e-09
Glyma18g40050.1 56 1e-08
Glyma07g16060.1 54 3e-08
Glyma12g06480.1 54 3e-08
>Glyma08g47410.1
Length = 508
Score = 86.3 bits (212), Expect = 7e-18, Method: Composition-based stats.
Identities = 50/116 (43%), Positives = 62/116 (53%), Gaps = 8/116 (6%)
Query: 1 VVLPFNTSVELIMQDTSILGAESHPLHLRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXE 60
VVLPFNTSVEL+MQDTSILGAESHPLHL
Sbjct: 389 VVLPFNTSVELVMQDTSILGAESHPLHLHVFNFLLLVKDLGTLIQIRTLQTSILLILLKG 448
Query: 61 HRWCTFWRLGCYKIPCRXSRYMVHALPYGSSHKLGYEDGLGCVRWKASQSKAASST 116
+ + +GC M+HALP S+H+LG +DGL CV W+ S+S+AAS+T
Sbjct: 449 TQLVSHLGMGCLG--------MLHALPSRSTHQLGSKDGLNCVGWRTSKSEAASTT 496
>Glyma08g47400.2
Length = 534
Score = 60.5 bits (145), Expect = 4e-10, Method: Composition-based stats.
Identities = 27/28 (96%), Positives = 28/28 (100%)
Query: 1 VVLPFNTSVELIMQDTSILGAESHPLHL 28
VVLPFNTSVEL+MQDTSILGAESHPLHL
Sbjct: 437 VVLPFNTSVELVMQDTSILGAESHPLHL 464
>Glyma18g38710.1
Length = 567
Score = 60.5 bits (145), Expect = 4e-10, Method: Composition-based stats.
Identities = 27/28 (96%), Positives = 28/28 (100%)
Query: 1 VVLPFNTSVELIMQDTSILGAESHPLHL 28
VVLPFNTSVEL+MQDTSILGAESHPLHL
Sbjct: 445 VVLPFNTSVELVMQDTSILGAESHPLHL 472
>Glyma18g38700.1
Length = 578
Score = 60.5 bits (145), Expect = 5e-10, Method: Composition-based stats.
Identities = 27/28 (96%), Positives = 28/28 (100%)
Query: 1 VVLPFNTSVELIMQDTSILGAESHPLHL 28
VVLPFNTSVEL+MQDTSILGAESHPLHL
Sbjct: 456 VVLPFNTSVELVMQDTSILGAESHPLHL 483
>Glyma08g47400.1
Length = 559
Score = 60.1 bits (144), Expect = 5e-10, Method: Composition-based stats.
Identities = 27/28 (96%), Positives = 28/28 (100%)
Query: 1 VVLPFNTSVELIMQDTSILGAESHPLHL 28
VVLPFNTSVEL+MQDTSILGAESHPLHL
Sbjct: 437 VVLPFNTSVELVMQDTSILGAESHPLHL 464
>Glyma08g47380.1
Length = 579
Score = 60.1 bits (144), Expect = 5e-10, Method: Composition-based stats.
Identities = 27/28 (96%), Positives = 28/28 (100%)
Query: 1 VVLPFNTSVELIMQDTSILGAESHPLHL 28
VVLPFNTSVEL+MQDTSILGAESHPLHL
Sbjct: 457 VVLPFNTSVELVMQDTSILGAESHPLHL 484
>Glyma18g38690.1
Length = 556
Score = 60.1 bits (144), Expect = 6e-10, Method: Composition-based stats.
Identities = 27/28 (96%), Positives = 28/28 (100%)
Query: 1 VVLPFNTSVELIMQDTSILGAESHPLHL 28
VVLPFNTSVEL+MQDTSILGAESHPLHL
Sbjct: 434 VVLPFNTSVELVMQDTSILGAESHPLHL 461
>Glyma18g38660.1
Length = 1634
Score = 59.3 bits (142), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 27/28 (96%), Positives = 28/28 (100%)
Query: 1 VVLPFNTSVELIMQDTSILGAESHPLHL 28
VVLPFNTSVEL+MQDTSILGAESHPLHL
Sbjct: 1512 VVLPFNTSVELVMQDTSILGAESHPLHL 1539
>Glyma08g47390.1
Length = 459
Score = 58.5 bits (140), Expect = 2e-09, Method: Composition-based stats.
Identities = 26/28 (92%), Positives = 28/28 (100%)
Query: 1 VVLPFNTSVELIMQDTSILGAESHPLHL 28
VVLPFNTSVEL++QDTSILGAESHPLHL
Sbjct: 337 VVLPFNTSVELVVQDTSILGAESHPLHL 364
>Glyma08g46820.1
Length = 580
Score = 57.4 bits (137), Expect = 4e-09, Method: Composition-based stats.
Identities = 25/28 (89%), Positives = 27/28 (96%)
Query: 1 VVLPFNTSVELIMQDTSILGAESHPLHL 28
VVLPFN SVELI+QDTSI+GAESHPLHL
Sbjct: 458 VVLPFNASVELILQDTSIIGAESHPLHL 485
>Glyma18g40070.1
Length = 539
Score = 56.6 bits (135), Expect = 5e-09, Method: Composition-based stats.
Identities = 24/28 (85%), Positives = 28/28 (100%)
Query: 1 VVLPFNTSVELIMQDTSILGAESHPLHL 28
VVLP+NTSVEL++QDTSI+GAESHPLHL
Sbjct: 417 VVLPYNTSVELVLQDTSIIGAESHPLHL 444
>Glyma07g16080.1
Length = 577
Score = 56.6 bits (135), Expect = 6e-09, Method: Composition-based stats.
Identities = 24/28 (85%), Positives = 28/28 (100%)
Query: 1 VVLPFNTSVELIMQDTSILGAESHPLHL 28
VVLP+NTSVEL++QDTSI+GAESHPLHL
Sbjct: 455 VVLPYNTSVELVLQDTSIIGAESHPLHL 482
>Glyma11g14600.1
Length = 558
Score = 56.6 bits (135), Expect = 7e-09, Method: Composition-based stats.
Identities = 23/28 (82%), Positives = 28/28 (100%)
Query: 1 VVLPFNTSVELIMQDTSILGAESHPLHL 28
VV+PFNTSV++++QDTSILGAESHPLHL
Sbjct: 436 VVIPFNTSVQVVLQDTSILGAESHPLHL 463
>Glyma18g40050.1
Length = 563
Score = 55.8 bits (133), Expect = 1e-08, Method: Composition-based stats.
Identities = 25/28 (89%), Positives = 27/28 (96%)
Query: 1 VVLPFNTSVELIMQDTSILGAESHPLHL 28
VVL FNTSVEL++QDTSILGAESHPLHL
Sbjct: 441 VVLKFNTSVELVLQDTSILGAESHPLHL 468
>Glyma07g16060.1
Length = 579
Score = 54.3 bits (129), Expect = 3e-08, Method: Composition-based stats.
Identities = 24/28 (85%), Positives = 27/28 (96%)
Query: 1 VVLPFNTSVELIMQDTSILGAESHPLHL 28
VVL FNTSVE+++QDTSILGAESHPLHL
Sbjct: 457 VVLKFNTSVEVVLQDTSILGAESHPLHL 484
>Glyma12g06480.1
Length = 531
Score = 53.9 bits (128), Expect = 3e-08, Method: Composition-based stats.
Identities = 22/28 (78%), Positives = 27/28 (96%)
Query: 1 VVLPFNTSVELIMQDTSILGAESHPLHL 28
VV+PFNT V++++QDTSILGAESHPLHL
Sbjct: 409 VVIPFNTRVQVVLQDTSILGAESHPLHL 436