Jatropha Genome Database

JcCA0022221.30
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0022221.30 + phase: 0 
         (296 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma12g23350.1                                                       446   e-125
Glyma06g37960.1                                                       440   e-123

>Glyma12g23350.1 
          Length = 306

 Score =  446 bits (1146), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 219/280 (78%), Positives = 228/280 (81%)

Query: 17  AKSWXXXXXXXXXXXXXXXXXXXYLARSRNFRSRVVGIIPARFASSRFQGKPLVQILGKP 76
           AK+W                   Y+ R   FRSRVVGIIPARFASSRFQGKPLVQILGKP
Sbjct: 27  AKAWIIHGIVAGVAIAAAVGARAYMTRFSKFRSRVVGIIPARFASSRFQGKPLVQILGKP 86

Query: 77  MIQRTWERAKLATTLDHIVVATDDEKIAECCRGFGADVIMTSESCRNGTERCNEALGKLE 136
           MIQRTWERAKLA TLDHIVVATDDEKIA+CCR FGADVIMTSESCRNGTERCNEAL KL 
Sbjct: 87  MIQRTWERAKLAATLDHIVVATDDEKIADCCRQFGADVIMTSESCRNGTERCNEALQKLG 146

Query: 137 KKYDVVVNIQGDEPLIEPEIIDGIVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDN 196
           KKYD+VVNIQGDEPLIEPEIIDG+VKALQAAPDAVFSTAVTSLKPEDA DPNRVKCVVDN
Sbjct: 147 KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAHDPNRVKCVVDN 206

Query: 197 RGYAIYFSRGLIPYNKSGKVNQQFPYLLHLGIQSYDAKFLKIYXXXXXXXXXXXXXXXXX 256
           RGYAIYFSRGLIP+NKSG VNQQFPYLLHLGIQSYDAKFL IY                 
Sbjct: 207 RGYAIYFSRGLIPFNKSGMVNQQFPYLLHLGIQSYDAKFLNIYPDLQPTPLQLEEDLEQL 266

Query: 257 XXXXNGYKMKVMKVDHEAHGVDTPDDVEKIETLMRERNLS 296
               NGYKMKV+KVDHEAHGVDTP+DV KIE+LMRERNLS
Sbjct: 267 KVLENGYKMKVIKVDHEAHGVDTPEDVGKIESLMRERNLS 306


>Glyma06g37960.1 
          Length = 256

 Score =  440 bits (1131), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 213/256 (83%), Positives = 223/256 (87%)

Query: 41  LARSRNFRSRVVGIIPARFASSRFQGKPLVQILGKPMIQRTWERAKLATTLDHIVVATDD 100
           + R   FRSRVVGIIPARFASSRF+GKPLVQILGKPMIQRTWERAKLA TLDH+VVATDD
Sbjct: 1   MTRFSKFRSRVVGIIPARFASSRFEGKPLVQILGKPMIQRTWERAKLAATLDHVVVATDD 60

Query: 101 EKIAECCRGFGADVIMTSESCRNGTERCNEALGKLEKKYDVVVNIQGDEPLIEPEIIDGI 160
           EKIA+CCR FGADVIMTSESCRNGTERCNEAL KL KKYD+VVNIQGDEPLIEPEIIDG+
Sbjct: 61  EKIADCCRQFGADVIMTSESCRNGTERCNEALQKLGKKYDIVVNIQGDEPLIEPEIIDGV 120

Query: 161 VKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNRGYAIYFSRGLIPYNKSGKVNQQF 220
           VKALQAAPDAVFSTAVTSLKPEDA DPNRVKCVVDNRGYAIYFSRGLIP+NKSGKVNQQF
Sbjct: 121 VKALQAAPDAVFSTAVTSLKPEDAHDPNRVKCVVDNRGYAIYFSRGLIPFNKSGKVNQQF 180

Query: 221 PYLLHLGIQSYDAKFLKIYXXXXXXXXXXXXXXXXXXXXXNGYKMKVMKVDHEAHGVDTP 280
           PYLLHLGIQSYDAKFL IY                     NGYKMKV+KV HEAHGVDTP
Sbjct: 181 PYLLHLGIQSYDAKFLNIYPNLRPTPLQLEEDLEQLKVLENGYKMKVIKVHHEAHGVDTP 240

Query: 281 DDVEKIETLMRERNLS 296
           +DV KIE+LMRERNLS
Sbjct: 241 EDVGKIESLMRERNLS 256