Jatropha Genome Database

JcCA0020841.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0020841.10 + phase: 0 /partial
         (79 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma05g37850.3                                                       144   2e-35
Glyma05g37850.1                                                       144   2e-35
Glyma05g37850.2                                                       130   3e-31
Glyma08g01750.2                                                       127   2e-30
Glyma08g01750.1                                                       127   2e-30

>Glyma05g37850.3 
          Length = 504

 Score =  144 bits (363), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 71/79 (89%), Positives = 76/79 (96%)

Query: 1   VPVTGLKTPFRDGLLRHVAEDVLQLAKDGLQRRGFKEVGFLNEVAEVVRTGVTPAEKLLE 60
           VPVTGLKTPFRDGLL+HVAEDVL+LAKDGL+RRGFKE GFLNEVAEVVRTGVTPAE+LLE
Sbjct: 426 VPVTGLKTPFRDGLLKHVAEDVLKLAKDGLERRGFKESGFLNEVAEVVRTGVTPAERLLE 485

Query: 61  LYNGKWGQSVDPVFEELLY 79
           LY+GKW QSVD VFEELLY
Sbjct: 486 LYHGKWEQSVDHVFEELLY 504


>Glyma05g37850.1 
          Length = 504

 Score =  144 bits (363), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 71/79 (89%), Positives = 76/79 (96%)

Query: 1   VPVTGLKTPFRDGLLRHVAEDVLQLAKDGLQRRGFKEVGFLNEVAEVVRTGVTPAEKLLE 60
           VPVTGLKTPFRDGLL+HVAEDVL+LAKDGL+RRGFKE GFLNEVAEVVRTGVTPAE+LLE
Sbjct: 426 VPVTGLKTPFRDGLLKHVAEDVLKLAKDGLERRGFKESGFLNEVAEVVRTGVTPAERLLE 485

Query: 61  LYNGKWGQSVDPVFEELLY 79
           LY+GKW QSVD VFEELLY
Sbjct: 486 LYHGKWEQSVDHVFEELLY 504


>Glyma05g37850.2 
          Length = 500

 Score =  130 bits (327), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 67/79 (84%), Positives = 72/79 (91%), Gaps = 4/79 (5%)

Query: 1   VPVTGLKTPFRDGLLRHVAEDVLQLAKDGLQRRGFKEVGFLNEVAEVVRTGVTPAEKLLE 60
           VPVTGLKTPFRDGLL+HVAEDVL+LAKDGL+RRGFKE GFLNEVAEVVRT    AE+LLE
Sbjct: 426 VPVTGLKTPFRDGLLKHVAEDVLKLAKDGLERRGFKESGFLNEVAEVVRT----AERLLE 481

Query: 61  LYNGKWGQSVDPVFEELLY 79
           LY+GKW QSVD VFEELLY
Sbjct: 482 LYHGKWEQSVDHVFEELLY 500


>Glyma08g01750.2 
          Length = 535

 Score =  127 bits (320), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 62/69 (89%), Positives = 67/69 (97%)

Query: 1   VPVTGLKTPFRDGLLRHVAEDVLQLAKDGLQRRGFKEVGFLNEVAEVVRTGVTPAEKLLE 60
           VPVTGLKTPFRDGLL+HVAEDVL+LAKDGL+RRGFKE GFLNEVAEVVRTGVTPAE+LLE
Sbjct: 432 VPVTGLKTPFRDGLLKHVAEDVLKLAKDGLERRGFKESGFLNEVAEVVRTGVTPAERLLE 491

Query: 61  LYNGKWGQS 69
           LY+GKW QS
Sbjct: 492 LYHGKWEQS 500


>Glyma08g01750.1 
          Length = 535

 Score =  127 bits (320), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 62/69 (89%), Positives = 67/69 (97%)

Query: 1   VPVTGLKTPFRDGLLRHVAEDVLQLAKDGLQRRGFKEVGFLNEVAEVVRTGVTPAEKLLE 60
           VPVTGLKTPFRDGLL+HVAEDVL+LAKDGL+RRGFKE GFLNEVAEVVRTGVTPAE+LLE
Sbjct: 432 VPVTGLKTPFRDGLLKHVAEDVLKLAKDGLERRGFKESGFLNEVAEVVRTGVTPAERLLE 491

Query: 61  LYNGKWGQS 69
           LY+GKW QS
Sbjct: 492 LYHGKWEQS 500