Jatropha Genome Database

JcCA0020761.30
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0020761.30 + phase: 0 /partial
         (309 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma03g32950.2                                                       584   e-167
Glyma03g32950.1                                                       584   e-167
Glyma03g32950.3                                                       582   e-166

>Glyma03g32950.2 
          Length = 958

 Score =  584 bits (1506), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 275/309 (88%), Positives = 283/309 (91%)

Query: 1   MATYAKPENALKRAEELINVGQKQDALQALHDLITSKRYRAWQKPLEKIMFKYVELCVDM 60
           M ++ KPENALKRAEELINVGQKQDALQ LHDLITSKRYRAWQK LE+IMFKYVELCVDM
Sbjct: 1   MTSFLKPENALKRAEELINVGQKQDALQTLHDLITSKRYRAWQKTLERIMFKYVELCVDM 60

Query: 61  RRGRFAKDGLIQYRIVCQQVNVNSLEEVIKHFMHLSTEKAEQARSXXXXXXXXXXXXXXX 120
           R+GRFAKDGLIQYRI+CQQVNV+SLEEVIKHFM LSTEKAEQARS               
Sbjct: 61  RKGRFAKDGLIQYRIICQQVNVSSLEEVIKHFMQLSTEKAEQARSQAQALEEALDVDDLE 120

Query: 121 XXKRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRTVLEILRNNSKLEALYAMTAH 180
             KRPEDLMLSYVSGEKGKDRSDRE VTPWFKFLWETYRTVLEILRNNSKLEALYAMTAH
Sbjct: 121 ADKRPEDLMLSYVSGEKGKDRSDRETVTPWFKFLWETYRTVLEILRNNSKLEALYAMTAH 180

Query: 181 RAFQFCKQYKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLSAPESLQLYLDTRFEQLKI 240
           RAFQFCKQYKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLSAPESLQLYLDTRFEQLKI
Sbjct: 181 RAFQFCKQYKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLSAPESLQLYLDTRFEQLKI 240

Query: 241 ATELELWQEAFRSIEDIHGLMCMVKKTPKPSLMVVYYAKLTEIFWISSSHLYHAYAWFKL 300
           ATEL LWQEAFRS+EDIHGLMC+VKKTPKPSLMVVYY KLTEIFWISSSHLYHAYAWFKL
Sbjct: 241 ATELGLWQEAFRSVEDIHGLMCLVKKTPKPSLMVVYYVKLTEIFWISSSHLYHAYAWFKL 300

Query: 301 FTLQKSFNK 309
           F LQKSFNK
Sbjct: 301 FLLQKSFNK 309


>Glyma03g32950.1 
          Length = 958

 Score =  584 bits (1506), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 275/309 (88%), Positives = 283/309 (91%)

Query: 1   MATYAKPENALKRAEELINVGQKQDALQALHDLITSKRYRAWQKPLEKIMFKYVELCVDM 60
           M ++ KPENALKRAEELINVGQKQDALQ LHDLITSKRYRAWQK LE+IMFKYVELCVDM
Sbjct: 1   MTSFLKPENALKRAEELINVGQKQDALQTLHDLITSKRYRAWQKTLERIMFKYVELCVDM 60

Query: 61  RRGRFAKDGLIQYRIVCQQVNVNSLEEVIKHFMHLSTEKAEQARSXXXXXXXXXXXXXXX 120
           R+GRFAKDGLIQYRI+CQQVNV+SLEEVIKHFM LSTEKAEQARS               
Sbjct: 61  RKGRFAKDGLIQYRIICQQVNVSSLEEVIKHFMQLSTEKAEQARSQAQALEEALDVDDLE 120

Query: 121 XXKRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRTVLEILRNNSKLEALYAMTAH 180
             KRPEDLMLSYVSGEKGKDRSDRE VTPWFKFLWETYRTVLEILRNNSKLEALYAMTAH
Sbjct: 121 ADKRPEDLMLSYVSGEKGKDRSDRETVTPWFKFLWETYRTVLEILRNNSKLEALYAMTAH 180

Query: 181 RAFQFCKQYKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLSAPESLQLYLDTRFEQLKI 240
           RAFQFCKQYKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLSAPESLQLYLDTRFEQLKI
Sbjct: 181 RAFQFCKQYKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLSAPESLQLYLDTRFEQLKI 240

Query: 241 ATELELWQEAFRSIEDIHGLMCMVKKTPKPSLMVVYYAKLTEIFWISSSHLYHAYAWFKL 300
           ATEL LWQEAFRS+EDIHGLMC+VKKTPKPSLMVVYY KLTEIFWISSSHLYHAYAWFKL
Sbjct: 241 ATELGLWQEAFRSVEDIHGLMCLVKKTPKPSLMVVYYVKLTEIFWISSSHLYHAYAWFKL 300

Query: 301 FTLQKSFNK 309
           F LQKSFNK
Sbjct: 301 FLLQKSFNK 309


>Glyma03g32950.3 
          Length = 753

 Score =  582 bits (1501), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 275/309 (88%), Positives = 283/309 (91%)

Query: 1   MATYAKPENALKRAEELINVGQKQDALQALHDLITSKRYRAWQKPLEKIMFKYVELCVDM 60
           M ++ KPENALKRAEELINVGQKQDALQ LHDLITSKRYRAWQK LE+IMFKYVELCVDM
Sbjct: 1   MTSFLKPENALKRAEELINVGQKQDALQTLHDLITSKRYRAWQKTLERIMFKYVELCVDM 60

Query: 61  RRGRFAKDGLIQYRIVCQQVNVNSLEEVIKHFMHLSTEKAEQARSXXXXXXXXXXXXXXX 120
           R+GRFAKDGLIQYRI+CQQVNV+SLEEVIKHFM LSTEKAEQARS               
Sbjct: 61  RKGRFAKDGLIQYRIICQQVNVSSLEEVIKHFMQLSTEKAEQARSQAQALEEALDVDDLE 120

Query: 121 XXKRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRTVLEILRNNSKLEALYAMTAH 180
             KRPEDLMLSYVSGEKGKDRSDRE VTPWFKFLWETYRTVLEILRNNSKLEALYAMTAH
Sbjct: 121 ADKRPEDLMLSYVSGEKGKDRSDRETVTPWFKFLWETYRTVLEILRNNSKLEALYAMTAH 180

Query: 181 RAFQFCKQYKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLSAPESLQLYLDTRFEQLKI 240
           RAFQFCKQYKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLSAPESLQLYLDTRFEQLKI
Sbjct: 181 RAFQFCKQYKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLSAPESLQLYLDTRFEQLKI 240

Query: 241 ATELELWQEAFRSIEDIHGLMCMVKKTPKPSLMVVYYAKLTEIFWISSSHLYHAYAWFKL 300
           ATEL LWQEAFRS+EDIHGLMC+VKKTPKPSLMVVYY KLTEIFWISSSHLYHAYAWFKL
Sbjct: 241 ATELGLWQEAFRSVEDIHGLMCLVKKTPKPSLMVVYYVKLTEIFWISSSHLYHAYAWFKL 300

Query: 301 FTLQKSFNK 309
           F LQKSFNK
Sbjct: 301 FLLQKSFNK 309