Jatropha Genome Database

JcCA0020601.30
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0020601.30 - phase: 0 /partial
         (149 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g03190.1                                                       207   4e-54
Glyma05g36390.1                                                       206   7e-54
Glyma18g45210.1                                                       185   2e-47
Glyma09g40640.1                                                       182   1e-46
Glyma15g16950.1                                                        76   1e-14
Glyma02g48000.1                                                        74   5e-14
Glyma14g00590.1                                                        70   1e-12
Glyma13g10820.1                                                        69   1e-12
Glyma09g05640.1                                                        62   2e-10
Glyma14g00590.2                                                        58   4e-09

>Glyma08g03190.1 
          Length = 420

 Score =  207 bits (527), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 99/129 (76%), Positives = 114/129 (88%), Gaps = 2/129 (1%)

Query: 1   ILRCARQLGDFLLVGIHTDQIVSEHRGKNYPIMHLHERSLSVLACRYVDEVIIGAPWEVS 60
           IL+ AR+LGDFLLVGIH+D+ VSEHRG +YPIMHLHERSLSVLACRYVDEVIIG+PWE++
Sbjct: 274 ILKRARELGDFLLVGIHSDETVSEHRGNHYPIMHLHERSLSVLACRYVDEVIIGSPWEIT 333

Query: 61  KDMITTFNISLVVHGTIAECNSLLAGIPDPYAVPKSMGIFQILESPKNITTTSVAQRIVA 120
            DMITTFNIS+VVHGT+AE    L    DPY VPKSMGIF +LESPK+ITT +VAQRI+A
Sbjct: 334 NDMITTFNISVVVHGTVAE--KTLNCELDPYEVPKSMGIFHLLESPKDITTATVAQRIMA 391

Query: 121 NHEAYMKRN 129
           NHEAY+KRN
Sbjct: 392 NHEAYVKRN 400



 Score = 62.0 bits (149), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 36/124 (29%), Positives = 69/124 (55%), Gaps = 9/124 (7%)

Query: 2   LRCARQLGDFLLVGIHTDQIVSEHRGKNYPIMHLHERSLSVLACRYVDEVIIGAPWEVSK 61
           LR A+ LGD L+VG+ +D+ +  ++G   P++ + ER   V   ++VDEVI  AP+ +++
Sbjct: 86  LRQAKALGDELVVGLVSDEEIVANKGP--PVLSMEERLALVSGLKWVDEVITDAPYAITE 143

Query: 62  DMIT----TFNISLVVHGTIAECNSLLAGIPDPYAVPKSMGIFQILESPKNITTTSVAQR 117
             +      + I  V+HG   +   LL    D YA  K  G ++ ++  + +++T +  R
Sbjct: 144 QFLNRLFHEYKIDYVIHG---DDPCLLPDGTDAYAAAKKAGRYKQIKRTEGVSSTDIVGR 200

Query: 118 IVAN 121
           I+++
Sbjct: 201 ILSS 204


>Glyma05g36390.1 
          Length = 420

 Score =  206 bits (524), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 98/129 (75%), Positives = 117/129 (90%), Gaps = 2/129 (1%)

Query: 1   ILRCARQLGDFLLVGIHTDQIVSEHRGKNYPIMHLHERSLSVLACRYVDEVIIGAPWEVS 60
           IL+ AR+LGDFLLVGIH+D+ VSEHRG +YPIMHLHERSLSVLACRYVDEVIIG+PWE++
Sbjct: 274 ILKRARELGDFLLVGIHSDETVSEHRGNHYPIMHLHERSLSVLACRYVDEVIIGSPWEIT 333

Query: 61  KDMITTFNISLVVHGTIAECNSLLAGIPDPYAVPKSMGIFQILESPKNITTTSVAQRIVA 120
            DMITTFNIS+VVHGT++E  SL   + DPY +PKSMGIF++LESPK+ITT +VAQRI+A
Sbjct: 334 NDMITTFNISVVVHGTVSE-KSLNCEL-DPYEIPKSMGIFRLLESPKDITTATVAQRIMA 391

Query: 121 NHEAYMKRN 129
           NHEAY+KRN
Sbjct: 392 NHEAYVKRN 400



 Score = 62.0 bits (149), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 36/124 (29%), Positives = 69/124 (55%), Gaps = 9/124 (7%)

Query: 2   LRCARQLGDFLLVGIHTDQIVSEHRGKNYPIMHLHERSLSVLACRYVDEVIIGAPWEVSK 61
           LR A+ LGD L+VG+ +D+ +  ++G   P++ + ER   V   ++VDEVI  AP+ +++
Sbjct: 86  LRQAKALGDELVVGLVSDEEIVANKGP--PVLSMEERLALVSGLKWVDEVITDAPYAITE 143

Query: 62  DMIT----TFNISLVVHGTIAECNSLLAGIPDPYAVPKSMGIFQILESPKNITTTSVAQR 117
             +      + I  V+HG   +   LL    D YA  K  G ++ ++  + +++T +  R
Sbjct: 144 QFLNRLFHEYKIDYVIHG---DDPCLLPDGTDAYAAAKKAGRYKQIKRTEGVSSTDIVGR 200

Query: 118 IVAN 121
           I+++
Sbjct: 201 ILSS 204


>Glyma18g45210.1 
          Length = 420

 Score =  185 bits (469), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 97/129 (75%), Positives = 109/129 (84%)

Query: 1   ILRCARQLGDFLLVGIHTDQIVSEHRGKNYPIMHLHERSLSVLACRYVDEVIIGAPWEVS 60
           ILR AR LGDFLLVGIHTDQ VS  RG + PIM+LHERSLSVLACRYVDEVIIGAPWE+S
Sbjct: 272 ILRLARDLGDFLLVGIHTDQTVSATRGSHRPIMNLHERSLSVLACRYVDEVIIGAPWEIS 331

Query: 61  KDMITTFNISLVVHGTIAECNSLLAGIPDPYAVPKSMGIFQILESPKNITTTSVAQRIVA 120
           KDM+TTFNISLVVHGTIAE N       +PYAVP SMGIF++LESP +ITTT++ +RIV+
Sbjct: 332 KDMLTTFNISLVVHGTIAESNDFQKEECNPYAVPISMGIFKVLESPLDITTTTIIRRIVS 391

Query: 121 NHEAYMKRN 129
           NHEAY  RN
Sbjct: 392 NHEAYQDRN 400



 Score = 62.0 bits (149), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/122 (31%), Positives = 67/122 (54%), Gaps = 9/122 (7%)

Query: 2   LRCARQLGDFLLVGIHTDQIVSEHRGKNYPIMHLHERSLSVLACRYVDEVIIGAPW---- 57
           LR AR LGD L+VG+ +D  +  ++G   P+  LHER + V A ++VDEVI  AP+    
Sbjct: 70  LRQARALGDQLIVGVVSDAEIIANKGP--PVTPLHERLIMVNAVKWVDEVIPEAPYAITE 127

Query: 58  EVSKDMITTFNISLVVHGTIAECNSLLAGIPDPYAVPKSMGIFQILESPKNITTTSVAQR 117
           E  K +   + I  ++HG   +   +L    D YA  K  G ++ ++  + +++T +  R
Sbjct: 128 EFMKKLFDEYKIDYIIHG---DDPCVLPDGTDAYAHAKKAGRYKQIKRTEGVSSTDIVGR 184

Query: 118 IV 119
           ++
Sbjct: 185 ML 186


>Glyma09g40640.1 
          Length = 366

 Score =  182 bits (461), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 96/129 (74%), Positives = 108/129 (83%)

Query: 1   ILRCARQLGDFLLVGIHTDQIVSEHRGKNYPIMHLHERSLSVLACRYVDEVIIGAPWEVS 60
           ILR AR LGDFLLVGIHTDQ VS  RG + PIM+LHERSLSVLACRYVDEVIIGAPWE+S
Sbjct: 218 ILRLARDLGDFLLVGIHTDQTVSATRGSHRPIMNLHERSLSVLACRYVDEVIIGAPWEIS 277

Query: 61  KDMITTFNISLVVHGTIAECNSLLAGIPDPYAVPKSMGIFQILESPKNITTTSVAQRIVA 120
           KDM+TTFNISLVVHGTIAE N       +PYAVP SMGIF++LES  +ITTT++ +RIV+
Sbjct: 278 KDMLTTFNISLVVHGTIAESNDFKKEECNPYAVPISMGIFKVLESTLDITTTTIIRRIVS 337

Query: 121 NHEAYMKRN 129
           NHEAY  RN
Sbjct: 338 NHEAYQNRN 346



 Score = 62.8 bits (151), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 39/122 (31%), Positives = 67/122 (54%), Gaps = 9/122 (7%)

Query: 2   LRCARQLGDFLLVGIHTDQIVSEHRGKNYPIMHLHERSLSVLACRYVDEVIIGAPW---- 57
           LR AR LGD L+VG+ +D  +  ++G   P+  LHER + V A ++VDEVI  AP+    
Sbjct: 16  LRQARALGDQLIVGVVSDAEIIANKGP--PVTPLHERLVMVNAVKWVDEVIPEAPYAITE 73

Query: 58  EVSKDMITTFNISLVVHGTIAECNSLLAGIPDPYAVPKSMGIFQILESPKNITTTSVAQR 117
           E  K +   + I  ++HG   +   +L    D YA  K  G ++ ++  + +++T +  R
Sbjct: 74  EFMKKLFDEYKIDFIIHG---DDPCVLPDGTDAYAHAKKAGRYKQIKRTEGVSSTDIVGR 130

Query: 118 IV 119
           ++
Sbjct: 131 ML 132


>Glyma15g16950.1 
          Length = 284

 Score = 76.3 bits (186), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 41/119 (34%), Positives = 67/119 (56%), Gaps = 3/119 (2%)

Query: 11  FLLVGIHTDQIVSEHRGKNYPIMHLHERSLSVLACRYVDEVIIGAPWEVSKDMITTFNIS 70
           +LLVG   D+I  +++GK   +M   ER  S+  CR+VDEVI  APW +S++ +    I 
Sbjct: 49  YLLVGCCNDEITHKYKGKT--VMTEKERYESLRHCRWVDEVIPDAPWVISREFLDKHQID 106

Query: 71  LVVHGTIAECNSLLAGIPDPYAVPKSMGIFQILESPKNITTTSVAQRIVANHEAYMKRN 129
            V H ++   ++  AG  D Y   KS+G F+  +    I+T+ +  RI+ ++  Y+ RN
Sbjct: 107 YVAHDSLPYADASGAG-KDVYEYVKSVGKFKETKRTDGISTSDIIMRIIKDYNQYVMRN 164


>Glyma02g48000.1 
          Length = 318

 Score = 74.3 bits (181), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 41/119 (34%), Positives = 68/119 (57%), Gaps = 3/119 (2%)

Query: 11  FLLVGIHTDQIVSEHRGKNYPIMHLHERSLSVLACRYVDEVIIGAPWEVSKDMITTFNIS 70
           +LLVG   DQ+  +++GK   +M   ER  S+  C++VDEVI  APW ++++ +   NI 
Sbjct: 51  YLLVGCCNDQVTHKYKGKT--VMTEAERYESLRHCKWVDEVIPDAPWVINQEFLDKHNID 108

Query: 71  LVVHGTIAECNSLLAGIPDPYAVPKSMGIFQILESPKNITTTSVAQRIVANHEAYMKRN 129
            V H ++   ++  A   D Y   KS+G F+  +  + I+T+ V  RIV ++  Y+ RN
Sbjct: 109 YVAHDSLPYADASGAA-NDVYEFVKSVGRFKETKRTEGISTSDVIMRIVKDYNQYVLRN 166


>Glyma14g00590.1 
          Length = 318

 Score = 69.7 bits (169), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 39/119 (32%), Positives = 67/119 (56%), Gaps = 3/119 (2%)

Query: 11  FLLVGIHTDQIVSEHRGKNYPIMHLHERSLSVLACRYVDEVIIGAPWEVSKDMITTFNIS 70
           +LLVG   D++  +++GK   +M   ER  S+  C++VDEVI  APW ++++ +    I 
Sbjct: 51  YLLVGCCNDEVTHKYKGKT--VMTEAERYESLRHCKWVDEVIPDAPWVINQEFLDKHYID 108

Query: 71  LVVHGTIAECNSLLAGIPDPYAVPKSMGIFQILESPKNITTTSVAQRIVANHEAYMKRN 129
            V H ++   ++  A   D Y   KS+G F+  +  + I+T+ V  RIV ++  Y+ RN
Sbjct: 109 YVAHDSLPYADASGAA-NDVYEFVKSVGRFKETKRTEGISTSDVIMRIVKDYNQYVLRN 166


>Glyma13g10820.1 
          Length = 292

 Score = 69.3 bits (168), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 38/120 (31%), Positives = 69/120 (57%), Gaps = 5/120 (4%)

Query: 11  FLLVGIHTDQIVSEHRGKNYPIMHLHERSLSVLACRYVDEVIIGAPWEVSKDMITTFNIS 70
           +LLVG  +D +  +++GK   +M   ER  S+  C++VDEVI  APW ++++ +    I 
Sbjct: 39  YLLVGCCSDAVTHKYKGKT--VMTEDERYESLRHCKWVDEVIPDAPWVINQEFLDKHKID 96

Query: 71  LVVHGTIAECNSLLAGIP-DPYAVPKSMGIFQILESPKNITTTSVAQRIVANHEAYMKRN 129
            V H ++   ++  +G+  D Y   K++G F+  +  + I+T+ V  RIV ++  Y+ RN
Sbjct: 97  YVAHDSLPYADT--SGVANDVYEFVKAVGKFKETQRTEGISTSDVIMRIVKDYNQYVLRN 154


>Glyma09g05640.1 
          Length = 216

 Score = 62.4 bits (150), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 32/97 (32%), Positives = 53/97 (54%), Gaps = 1/97 (1%)

Query: 33  MHLHERSLSVLACRYVDEVIIGAPWEVSKDMITTFNISLVVHGTIAECNSLLAGIPDPYA 92
           M   ER  S+  CR+VDEVI  APW ++++ +    I  V H ++   ++  AG  D Y 
Sbjct: 1   MTEKERYESLRHCRWVDEVIPDAPWVITQEFLDKHQIDYVAHDSLPYADASGAG-KDVYE 59

Query: 93  VPKSMGIFQILESPKNITTTSVAQRIVANHEAYMKRN 129
             KS+G F+  +    I+T+ +  RI+ ++  Y+ RN
Sbjct: 60  YVKSVGKFKETKRTDGISTSDIIMRIIKDYNQYVMRN 96


>Glyma14g00590.2 
          Length = 248

 Score = 57.8 bits (138), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 31/93 (33%), Positives = 52/93 (55%), Gaps = 1/93 (1%)

Query: 37  ERSLSVLACRYVDEVIIGAPWEVSKDMITTFNISLVVHGTIAECNSLLAGIPDPYAVPKS 96
           ER  S+  C++VDEVI  APW ++++ +    I  V H ++   ++  A   D Y   KS
Sbjct: 5   ERYESLRHCKWVDEVIPDAPWVINQEFLDKHYIDYVAHDSLPYADASGAA-NDVYEFVKS 63

Query: 97  MGIFQILESPKNITTTSVAQRIVANHEAYMKRN 129
           +G F+  +  + I+T+ V  RIV ++  Y+ RN
Sbjct: 64  VGRFKETKRTEGISTSDVIMRIVKDYNQYVLRN 96