Jatropha Genome Database

JcCA0020601.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0020601.20 + phase: 0 
         (228 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g03200.1                                                        89   3e-18
Glyma05g36380.1                                                        78   7e-15

>Glyma08g03200.1 
          Length = 199

 Score = 89.4 bits (220), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 68/201 (33%), Positives = 97/201 (48%), Gaps = 33/201 (16%)

Query: 31  PARKIRRLDXXXXXXXXXXXXXXXXXXVFVGGVEEKQQPMVDSGVGNQERAIVVFKPVKT 90
           PA KIRRLD                    +  + E+ +P++   + N+ERA+V+FKP+  
Sbjct: 25  PATKIRRLDAE------------------LPPIVEEDKPLL---LPNEERALVLFKPL-- 61

Query: 91  NPXXXXXXXXXXXXXXXXXYGIKS-QFLRSS-CNGNIRLAEEEREATNECMAVVPWVPSQ 148
                               GI++ Q+L S  C     L  E RE  N+ +A+VPWVPS 
Sbjct: 62  ---VHSHSSFSLTLDPDLMNGIRNNQYLWSKECERVTEL--ESREKENDELALVPWVPSP 116

Query: 149 AAFAR--GIDTSQAEAPDLMEAEQVGEETMEIEFEGNNTIQSNELESGGMMSGTQG-LPQ 205
           +   +   +D S     +LMEA++ G   M+IE E +  I +    S      T G + +
Sbjct: 117 SYHYQFSPVDDSDNTNAELMEADETGSMMMDIEQEHDTDIDAKISTSSIHYPTTHGGITE 176

Query: 206 WQQQHCLIPQLPQNTSTPITW 226
             QQHCL+PQLP NTSTPITW
Sbjct: 177 GFQQHCLLPQLPHNTSTPITW 197


>Glyma05g36380.1 
          Length = 206

 Score = 78.2 bits (191), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 63/208 (30%), Positives = 95/208 (45%), Gaps = 40/208 (19%)

Query: 31  PARKIRRLDXXXXXXXXXXXXXXXXXXVFVGGVEEKQQPMVDSGVGNQERAIVVFKPVKT 90
           PA KIRRLD                    +  + E+ +P+      N+ERA+V+FKP+  
Sbjct: 25  PATKIRRLDAE------------------LPPILEEDEPL-----PNEERALVLFKPLVH 61

Query: 91  NPXXXXXXXXXXXXXXXXXYGIKS-QFLRSSCNGNIRLAEEEREATNECMAVVPWVPSQA 149
           +P                  GI++ Q+L S     +   E   E  ++ +A+VPWVPS +
Sbjct: 62  SPSSFSLTLDSDLMK-----GIRNNQYLWSKQCERVTELESREEENDDELALVPWVPSPS 116

Query: 150 AFARGIDTSQAEAPDLMEAEQVGE------ETMEIEFEGNNTIQSNELESGGMMS----- 198
                +D S     +LMEA+++GE        M+IE E +    ++        S     
Sbjct: 117 YQFSAVDDSLNTNVELMEADEMGEGEGVGSMMMDIEQEDDTDTDTDTDAKTSTSSIHYPT 176

Query: 199 GTQGLPQWQQQHCLIPQLPQNTSTPITW 226
              G+ +  QQHCL+P+LP NTSTPITW
Sbjct: 177 THDGITEGFQQHCLLPKLPHNTSTPITW 204