Jatropha Genome Database

JcCA0019191.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0019191.20 - phase: 0 /partial
         (153 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma19g29380.1                                                       220   4e-58
Glyma16g04120.1                                                       218   2e-57
Glyma01g41650.1                                                        58   4e-09
Glyma17g15190.1                                                        57   7e-09
Glyma11g03710.1                                                        56   1e-08
Glyma05g04750.1                                                        56   2e-08

>Glyma19g29380.1 
          Length = 312

 Score =  220 bits (561), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 102/142 (71%), Positives = 118/142 (83%)

Query: 11  VVLIREFEVDFILLAGYLKLIPAELVQAYPKRILNIHPALLPAFGGKGYYGMKVHKAVIA 70
           V  +R+FEVDFILLAGYLKLIP EL++AY + I NIHP+LLPAFGGKG+YGMKVHKAVIA
Sbjct: 170 VDTLRKFEVDFILLAGYLKLIPVELIRAYKRSIFNIHPSLLPAFGGKGFYGMKVHKAVIA 229

Query: 71  SGARYSGPTIHFVDEHYDTGLIIAQRVVPVLANDTXXXXXXXXXXXXXXXYVEVTAALCE 130
           SGAR+SGPTIHFVDEHYDTG I+AQRVVPVLANDT               YVEV  ALCE
Sbjct: 230 SGARFSGPTIHFVDEHYDTGRILAQRVVPVLANDTVEELAARVLKEEHQLYVEVVEALCE 289

Query: 131 ERIIWREDGVPLIRSRENPNQY 152
           ER++WR+DGVPLI+S+ENPN++
Sbjct: 290 ERVVWRQDGVPLIQSKENPNEF 311


>Glyma16g04120.1 
          Length = 316

 Score =  218 bits (555), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 101/142 (71%), Positives = 118/142 (83%)

Query: 11  VVLIREFEVDFILLAGYLKLIPAELVQAYPKRILNIHPALLPAFGGKGYYGMKVHKAVIA 70
           V  +R+F+VDFILLAGYLKLIP EL++AY + I NIHP+LLPAFGGKG+YGMKVHKAVIA
Sbjct: 174 VETLRKFKVDFILLAGYLKLIPVELIRAYERSIFNIHPSLLPAFGGKGFYGMKVHKAVIA 233

Query: 71  SGARYSGPTIHFVDEHYDTGLIIAQRVVPVLANDTXXXXXXXXXXXXXXXYVEVTAALCE 130
           SGAR+SGPTIHFVDEHYDTG I+AQRVVPVLANDT               YVEV  ALCE
Sbjct: 234 SGARFSGPTIHFVDEHYDTGRILAQRVVPVLANDTAEELAARVLKEEHQLYVEVVEALCE 293

Query: 131 ERIIWREDGVPLIRSRENPNQY 152
           ER++WR+DGVPLI+S+ENPN++
Sbjct: 294 ERVVWRKDGVPLIQSKENPNEF 315


>Glyma01g41650.1 
          Length = 290

 Score = 57.8 bits (138), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 34/117 (29%), Positives = 52/117 (44%), Gaps = 5/117 (4%)

Query: 18  EVDFILLAGYLKLIPAELVQAYPKRILNIHPALLPAFGGKGYYGMKVHKAVIASGARYSG 77
             DF++LA  ++++ +  +++Y K I+NIH  LLP+F G         K  + +G +  G
Sbjct: 169 NTDFLVLARSMRILSSFFLRSYGKDIINIHHGLLPSFSGSN-----PSKQAVDAGVKLIG 223

Query: 78  PTIHFVDEHYDTGLIIAQRVVPVLANDTXXXXXXXXXXXXXXXYVEVTAALCEERII 134
            T HFV E  D G II Q V  V   D                      + CE R++
Sbjct: 224 ATSHFVTEGLDAGPIIEQMVERVSHRDNLQSYVQKSENLEKQCLTSAIRSYCELRVL 280


>Glyma17g15190.1 
          Length = 316

 Score = 57.0 bits (136), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 53/121 (43%), Gaps = 5/121 (4%)

Query: 18  EVDFILLAGYLKLIPAELVQAYPKRILNIHPALLPAFGGKGYYGMKVHKAVIASGARYSG 77
             DF++LA Y++++    +++Y   I+NIH  LLP+F G         K    +G +  G
Sbjct: 195 NTDFLVLARYMQILSGNFLRSYGNDIINIHHGLLPSFKGGN-----PSKQAFEAGVKLIG 249

Query: 78  PTIHFVDEHYDTGLIIAQRVVPVLANDTXXXXXXXXXXXXXXXYVEVTAALCEERIIWRE 137
            T H+V E  D G II Q V  V   D                  +   + CE R++  E
Sbjct: 250 ATSHYVTEELDAGPIIEQMVERVSHRDNLQSFVQKSENLEKQCLSKAIRSYCELRVLPYE 309

Query: 138 D 138
           +
Sbjct: 310 E 310


>Glyma11g03710.1 
          Length = 251

 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 33/116 (28%), Positives = 52/116 (44%), Gaps = 5/116 (4%)

Query: 19  VDFILLAGYLKLIPAELVQAYPKRILNIHPALLPAFGGKGYYGMKVHKAVIASGARYSGP 78
            DF++LA Y++++ +  +++Y + I+NIH  LLP+F           K  + +G +  G 
Sbjct: 131 TDFLVLARYMRILSSFFLRSYGEDIINIHHGLLPSFSSSN-----PSKQAVDAGVKLIGA 185

Query: 79  TIHFVDEHYDTGLIIAQRVVPVLANDTXXXXXXXXXXXXXXXYVEVTAALCEERII 134
           T HFV E    G II Q V  V   D                   V  + CE R++
Sbjct: 186 TSHFVTERLAAGPIIEQMVERVSHRDKLQSFVQKSENLEKQCLTSVIRSYCELRVL 241


>Glyma05g04750.1 
          Length = 316

 Score = 55.8 bits (133), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 52/121 (42%), Gaps = 5/121 (4%)

Query: 18  EVDFILLAGYLKLIPAELVQAYPKRILNIHPALLPAFGGKGYYGMKVHKAVIASGARYSG 77
             D ++LA Y++++    +++Y   I+NIH  LLP+F G         K    +G +  G
Sbjct: 195 NTDILVLARYMQILSGNFLRSYGNDIINIHHGLLPSFKGGN-----PSKQAFEAGVKLIG 249

Query: 78  PTIHFVDEHYDTGLIIAQRVVPVLANDTXXXXXXXXXXXXXXXYVEVTAALCEERIIWRE 137
            T HFV E  D G II Q V  V   D                  +   + CE R++  E
Sbjct: 250 ATSHFVTEELDAGPIIEQMVERVSHRDNLQSFVQKSENLEKQCLSKAIRSYCELRVLPYE 309

Query: 138 D 138
           +
Sbjct: 310 E 310