Jatropha Genome Database

JcCA0013701.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0013701.10 + phase: 0 /pseudo/partial
         (274 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma01g36040.1                                                       106   2e-23
Glyma11g09370.2                                                       106   3e-23
Glyma11g09370.1                                                       105   5e-23
Glyma09g32820.1                                                       103   3e-22
Glyma16g21840.1                                                       100   2e-21
Glyma16g21840.2                                                       100   2e-21
Glyma06g01640.1                                                        95   1e-19
Glyma04g01560.1                                                        94   2e-19
Glyma05g10630.1                                                        65   5e-11

>Glyma01g36040.1 
          Length = 511

 Score =  106 bits (265), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 47/64 (73%), Positives = 53/64 (82%)

Query: 1   VTSYKLWRQVGESFNPPKTCTTVSWTFRNFYEKALLEYEKHKVRCGELPFPDGSLTEPVR 60
           VTS KLWRQVGESF PPKTCTTVSWTFR FYEKALL+YE+HK++ GEL  P  S  EP+ 
Sbjct: 273 VTSCKLWRQVGESFKPPKTCTTVSWTFRGFYEKALLDYERHKIKGGELNVPVASHPEPIN 332

Query: 61  VENQ 64
           +ENQ
Sbjct: 333 IENQ 336


>Glyma11g09370.2 
          Length = 456

 Score =  106 bits (264), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 47/67 (70%), Positives = 53/67 (79%)

Query: 1   VTSYKLWRQVGESFNPPKTCTTVSWTFRNFYEKALLEYEKHKVRCGELPFPDGSLTEPVR 60
           VTS KLWRQVGESF PPKTCTTVSWTFR FYEKALL+YE+HK++ GEL  P  S  EP+ 
Sbjct: 281 VTSCKLWRQVGESFKPPKTCTTVSWTFRGFYEKALLDYERHKIQGGELNVPVASHPEPIN 340

Query: 61  VENQLHC 67
           +ENQ   
Sbjct: 341 IENQASA 347


>Glyma11g09370.1 
          Length = 528

 Score =  105 bits (262), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 47/67 (70%), Positives = 53/67 (79%)

Query: 1   VTSYKLWRQVGESFNPPKTCTTVSWTFRNFYEKALLEYEKHKVRCGELPFPDGSLTEPVR 60
           VTS KLWRQVGESF PPKTCTTVSWTFR FYEKALL+YE+HK++ GEL  P  S  EP+ 
Sbjct: 281 VTSCKLWRQVGESFKPPKTCTTVSWTFRGFYEKALLDYERHKIQGGELNVPVASHPEPIN 340

Query: 61  VENQLHC 67
           +ENQ   
Sbjct: 341 IENQASA 347


>Glyma09g32820.1 
          Length = 466

 Score =  103 bits (256), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 47/69 (68%), Positives = 52/69 (75%)

Query: 1   VTSYKLWRQVGESFNPPKTCTTVSWTFRNFYEKALLEYEKHKVRCGELPFPDGSLTEPVR 60
           VTSYKLWRQVGESF PPKTCTTVSWTFR FYEKALL+YE+H  + GEL  P     EP+ 
Sbjct: 224 VTSYKLWRQVGESFKPPKTCTTVSWTFRVFYEKALLDYERHTTKGGELNVPITPHAEPIN 283

Query: 61  VENQLHCRL 69
           +ENQ    L
Sbjct: 284 IENQGSASL 292


>Glyma16g21840.1 
          Length = 512

 Score =  100 bits (248), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 45/64 (70%), Positives = 50/64 (78%)

Query: 1   VTSYKLWRQVGESFNPPKTCTTVSWTFRNFYEKALLEYEKHKVRCGELPFPDGSLTEPVR 60
           VTS K WRQVGESF PPKTCTTVSWTFR FYEKALL+YE+H  + GEL  P   L EP+ 
Sbjct: 258 VTSCKFWRQVGESFKPPKTCTTVSWTFRVFYEKALLDYERHTTKGGELNVPITPLAEPIN 317

Query: 61  VENQ 64
           +ENQ
Sbjct: 318 IENQ 321


>Glyma16g21840.2 
          Length = 508

 Score =  100 bits (248), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 45/64 (70%), Positives = 50/64 (78%)

Query: 1   VTSYKLWRQVGESFNPPKTCTTVSWTFRNFYEKALLEYEKHKVRCGELPFPDGSLTEPVR 60
           VTS K WRQVGESF PPKTCTTVSWTFR FYEKALL+YE+H  + GEL  P   L EP+ 
Sbjct: 258 VTSCKFWRQVGESFKPPKTCTTVSWTFRVFYEKALLDYERHTTKGGELNVPITPLAEPIN 317

Query: 61  VENQ 64
           +ENQ
Sbjct: 318 IENQ 321


>Glyma06g01640.1 
          Length = 391

 Score = 94.7 bits (234), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 45/64 (70%), Positives = 48/64 (75%)

Query: 1   VTSYKLWRQVGESFNPPKTCTTVSWTFRNFYEKALLEYEKHKVRCGELPFPDGSLTEPVR 60
           VT  KLWRQVGESF+PPKTCTTVSWTFR FYEKALLEYEKHK   GEL  P G   +   
Sbjct: 140 VTGSKLWRQVGESFHPPKTCTTVSWTFRIFYEKALLEYEKHKREIGELQLPVGPFHQSSN 199

Query: 61  VENQ 64
           VE +
Sbjct: 200 VEKE 203


>Glyma04g01560.1 
          Length = 451

 Score = 93.6 bits (231), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 44/64 (68%), Positives = 48/64 (75%)

Query: 1   VTSYKLWRQVGESFNPPKTCTTVSWTFRNFYEKALLEYEKHKVRCGELPFPDGSLTEPVR 60
           VT  KLWRQVGESF+PPKTCTTVSWTFR FYEKALLEYE+HK   GEL  P G   +   
Sbjct: 173 VTGSKLWRQVGESFHPPKTCTTVSWTFRIFYEKALLEYERHKREIGELQLPVGPFHQSSN 232

Query: 61  VENQ 64
           VE +
Sbjct: 233 VEKE 236


>Glyma05g10630.1 
          Length = 181

 Score = 65.5 bits (158), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 30/37 (81%), Positives = 32/37 (86%)

Query: 1   VTSYKLWRQVGESFNPPKTCTTVSWTFRNFYEKALLE 37
           VTS KLWRQVGESF PPKTCTT+SWTF  FY+KA LE
Sbjct: 126 VTSCKLWRQVGESFKPPKTCTTISWTFWRFYKKAPLE 162