Jatropha Genome Database
- JcCA0012252.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0012252.10 + phase: 2 /partial
(270 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma19g34340.1 504 e-143
Glyma03g31490.1 501 e-142
Glyma03g31490.2 286 1e-77
Glyma06g18070.1 64 1e-10
Glyma16g06710.1 59 5e-09
Glyma16g06710.2 59 5e-09
Glyma15g09620.1 59 6e-09
Glyma19g24590.1 58 1e-08
Glyma16g06720.1 57 2e-08
Glyma04g36910.1 57 2e-08
Glyma18g10890.1 57 3e-08
Glyma13g29430.2 55 6e-08
Glyma13g29430.1 55 6e-08
Glyma15g06570.1 52 5e-07
Glyma05g03070.1 51 1e-06
Glyma14g02590.1 50 3e-06
Glyma02g34200.1 50 4e-06
>Glyma19g34340.1
Length = 540
Score = 504 bits (1297), Expect = e-143, Method: Compositional matrix adjust.
Identities = 241/284 (84%), Positives = 253/284 (89%), Gaps = 16/284 (5%)
Query: 1 QKFGEIAFCAITADEQVKGYGTRLMNHLKQHARDVDGLTHFLTYADNNAVGYFIKQGFTK 60
QKFGEIAFCAITADEQVKGYGTRLMNHLKQ+ARD+DGLTHFLTYADNNAVGYFIKQGFTK
Sbjct: 259 QKFGEIAFCAITADEQVKGYGTRLMNHLKQYARDMDGLTHFLTYADNNAVGYFIKQGFTK 318
Query: 61 EIYLDKDRWQGYIKDYDGGILMECKIDPKLPYTDLSTMIRRQRQAIDEKIRELSNCHIVY 120
EI+L+KDRWQGYIKDYDGGILMECKIDPKLPYTDLSTMIRRQRQAIDEKIRELSNCHIVY
Sbjct: 319 EIHLEKDRWQGYIKDYDGGILMECKIDPKLPYTDLSTMIRRQRQAIDEKIRELSNCHIVY 378
Query: 121 PGIDFQKKEVGIPKKIIKVEDIPGLREAGWTPDQWGYSRFNAFNTSTDSATNQKHWTAFM 180
GIDFQKKE GIPKKII +DIPGLREAGWTPDQWG+SRF N STD+ATNQKH FM
Sbjct: 379 AGIDFQKKEAGIPKKII--DDIPGLREAGWTPDQWGHSRFRTLNVSTDNATNQKHLNGFM 436
Query: 181 RSLLKSMHDHADAWPFKEPVDARDVPDYYDIIKDPMDLKTMSKRVESEQYYVTFDMFVAD 240
RSLLKSM DHADAWPFKEPVDARDVPDYYDIIKDPMDLKTMSKRV+SEQYYVTF+MFVAD
Sbjct: 437 RSLLKSMFDHADAWPFKEPVDARDVPDYYDIIKDPMDLKTMSKRVDSEQYYVTFEMFVAD 496
Query: 241 VKRMFANART--------------LEAHFESKVQSGFQSAAKIQ 270
+RMFANART LEAHF+SKVQ+G Q KIQ
Sbjct: 497 ARRMFANARTYNSPETIYYKCSTRLEAHFQSKVQAGLQPGTKIQ 540
>Glyma03g31490.1
Length = 543
Score = 501 bits (1290), Expect = e-142, Method: Compositional matrix adjust.
Identities = 239/284 (84%), Positives = 252/284 (88%), Gaps = 16/284 (5%)
Query: 1 QKFGEIAFCAITADEQVKGYGTRLMNHLKQHARDVDGLTHFLTYADNNAVGYFIKQGFTK 60
Q+FGEIAFCAITADEQVKGYGTRLMNHLKQ ARD+DGLTHFLTYADNNAVGYFIKQGFTK
Sbjct: 262 QRFGEIAFCAITADEQVKGYGTRLMNHLKQFARDMDGLTHFLTYADNNAVGYFIKQGFTK 321
Query: 61 EIYLDKDRWQGYIKDYDGGILMECKIDPKLPYTDLSTMIRRQRQAIDEKIRELSNCHIVY 120
EI+L+KDRWQGYIKDYDGGILMECKIDPKLPYTDLSTMIRRQRQAIDEKIRELSNCHIVY
Sbjct: 322 EIHLEKDRWQGYIKDYDGGILMECKIDPKLPYTDLSTMIRRQRQAIDEKIRELSNCHIVY 381
Query: 121 PGIDFQKKEVGIPKKIIKVEDIPGLREAGWTPDQWGYSRFNAFNTSTDSATNQKHWTAFM 180
GIDFQKKE GIPKKII +DIPGLREAGWTPDQWG+SRF N S+D+ATNQKH FM
Sbjct: 382 AGIDFQKKEAGIPKKII--DDIPGLREAGWTPDQWGHSRFRTLNVSSDNATNQKHLNGFM 439
Query: 181 RSLLKSMHDHADAWPFKEPVDARDVPDYYDIIKDPMDLKTMSKRVESEQYYVTFDMFVAD 240
RSLLKSM DHADAWPFKEPVDARDVPDYYDIIKDPMDLKTMSKRV+SEQYYVTF+MFVAD
Sbjct: 440 RSLLKSMFDHADAWPFKEPVDARDVPDYYDIIKDPMDLKTMSKRVDSEQYYVTFEMFVAD 499
Query: 241 VKRMFANART--------------LEAHFESKVQSGFQSAAKIQ 270
+RMFANART LEAHF+SKVQ+G Q KIQ
Sbjct: 500 ARRMFANARTYNSPETIYYKCSTRLEAHFQSKVQAGLQPGTKIQ 543
>Glyma03g31490.2
Length = 418
Score = 286 bits (733), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 135/145 (93%), Positives = 140/145 (96%), Gaps = 2/145 (1%)
Query: 1 QKFGEIAFCAITADEQVKGYGTRLMNHLKQHARDVDGLTHFLTYADNNAVGYFIKQGFTK 60
Q+FGEIAFCAITADEQVKGYGTRLMNHLKQ ARD+DGLTHFLTYADNNAVGYFIKQGFTK
Sbjct: 262 QRFGEIAFCAITADEQVKGYGTRLMNHLKQFARDMDGLTHFLTYADNNAVGYFIKQGFTK 321
Query: 61 EIYLDKDRWQGYIKDYDGGILMECKIDPKLPYTDLSTMIRRQRQAIDEKIRELSNCHIVY 120
EI+L+KDRWQGYIKDYDGGILMECKIDPKLPYTDLSTMIRRQRQAIDEKIRELSNCHIVY
Sbjct: 322 EIHLEKDRWQGYIKDYDGGILMECKIDPKLPYTDLSTMIRRQRQAIDEKIRELSNCHIVY 381
Query: 121 PGIDFQKKEVGIPKKIIKVEDIPGL 145
GIDFQKKE GIPKKII +DIPGL
Sbjct: 382 AGIDFQKKEAGIPKKII--DDIPGL 404
>Glyma06g18070.1
Length = 662
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 61/131 (46%), Gaps = 7/131 (5%)
Query: 124 DFQKKEVGIPKKIIK----VEDIPGLREAGWTPDQWGYSRFNAFNTSTDSATNQKHWTAF 179
+FQKK G+ ++ DI G P R N + + +H
Sbjct: 102 EFQKKIDGMNSSVVGGLSLFSDIRGCSAGQKRPKLESQHRHNGPKSKKSMSERLEHAKPA 161
Query: 180 MRSLLKSMHDHADAWPFKEPVDA--RDVPDYYDIIKDPMDLKTMSKRVESEQYYVTFDMF 237
++L + H AW F +PVD ++PDY+ +IK PMDL T+ KR+ S +Y D F
Sbjct: 162 APNVLNRLMSHQFAWVFNDPVDVVKLNIPDYFTVIKHPMDLGTVKKRITSGEYSNPMD-F 220
Query: 238 VADVKRMFANA 248
ADV+ F NA
Sbjct: 221 AADVRLTFDNA 231
>Glyma16g06710.1
Length = 744
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 50/99 (50%), Gaps = 6/99 (6%)
Query: 155 WGYSRFNAFNTSTDSATNQKHWTAFMRS---LLKSMHDHADAWPFKEPVDA--RDVPDYY 209
W F ++ SA+ M+ LLK + H AW FK PVD ++PDY+
Sbjct: 156 WNRGSSGKFESAVQSASPSTANAMLMKDCELLLKRLMSHQYAWVFKTPVDVVKLNLPDYF 215
Query: 210 DIIKDPMDLKTMSKRVESEQYYVTFDMFVADVKRMFANA 248
IIK PMDL T+ ++ + +Y + F DVK F+NA
Sbjct: 216 TIIKRPMDLGTVKSKLAAGEYAGPLE-FADDVKLTFSNA 253
>Glyma16g06710.2
Length = 591
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 50/99 (50%), Gaps = 6/99 (6%)
Query: 155 WGYSRFNAFNTSTDSATNQKHWTAFMRS---LLKSMHDHADAWPFKEPVDA--RDVPDYY 209
W F ++ SA+ M+ LLK + H AW FK PVD ++PDY+
Sbjct: 156 WNRGSSGKFESAVQSASPSTANAMLMKDCELLLKRLMSHQYAWVFKTPVDVVKLNLPDYF 215
Query: 210 DIIKDPMDLKTMSKRVESEQYYVTFDMFVADVKRMFANA 248
IIK PMDL T+ ++ + +Y + F DVK F+NA
Sbjct: 216 TIIKRPMDLGTVKSKLAAGEYAGPLE-FADDVKLTFSNA 253
>Glyma15g09620.1
Length = 565
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 43/69 (62%), Gaps = 3/69 (4%)
Query: 182 SLLKSMHDHADAWPFKEPVD--ARDVPDYYDIIKDPMDLKTMSKRVESEQYYVTFDMFVA 239
++LKS+ H +W F +PVD A +PDY+ II PMDL T+ ++E Y T + F A
Sbjct: 85 TILKSLMSHTYSWVFSKPVDPIALSIPDYFTIISHPMDLGTIKSKLEKNIYSGT-EEFAA 143
Query: 240 DVKRMFANA 248
DV+ F+NA
Sbjct: 144 DVRLTFSNA 152
>Glyma19g24590.1
Length = 701
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 158 SRFNAFNTSTDSATNQKHWTAFMRSLLKSMHDHADAWPFKEPVDA--RDVPDYYDIIKDP 215
SRF + S +T LLK + +H AW F PVD ++PDY+ IIK P
Sbjct: 97 SRFESAVQSASPSTANAMLMKDCELLLKRLMNHQYAWVFNTPVDVVKLNLPDYFTIIKRP 156
Query: 216 MDLKTMSKRVESEQYYVTFDMFVADVKRMFANA 248
MDL T+ ++ S +Y + F DVK F+NA
Sbjct: 157 MDLGTVKNKLASGEYAGPLE-FADDVKLTFSNA 188
>Glyma16g06720.1
Length = 625
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 50/102 (49%), Gaps = 6/102 (5%)
Query: 152 PDQWGYSRFNAFNTSTDSATNQKHWTAFMRS---LLKSMHDHADAWPFKEPVDA--RDVP 206
P +W F ++T ++ M+ LLK + H W FK PVD +P
Sbjct: 150 PREWNRGSSGKFESATRTSLLSAANALLMKDCELLLKRLMSHQYGWVFKTPVDVVKLKLP 209
Query: 207 DYYDIIKDPMDLKTMSKRVESEQYYVTFDMFVADVKRMFANA 248
DY+ IIK PMDL T+ ++ + +Y + F DV+ F+NA
Sbjct: 210 DYFSIIKHPMDLGTVKSKIAAGEYAGPIE-FADDVRLTFSNA 250
>Glyma04g36910.1
Length = 713
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
Query: 179 FMRSLLKSMHDHADAWPFKEPVDA--RDVPDYYDIIKDPMDLKTMSKRVESEQYYVTFDM 236
++L + H W F PVD ++PDY+ +IK PMDL T+ KR+ S +Y D
Sbjct: 187 LCENVLNRLMSHQFGWVFNTPVDVVKLNIPDYFTVIKHPMDLGTVKKRITSGEYSNPMD- 245
Query: 237 FVADVKRMFANA 248
F ADV+ F NA
Sbjct: 246 FAADVRLTFENA 257
>Glyma18g10890.1
Length = 710
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 36/53 (67%)
Query: 196 FKEPVDARDVPDYYDIIKDPMDLKTMSKRVESEQYYVTFDMFVADVKRMFANA 248
F +PVD ++PDY+D+IK PMD T+ K++ +E Y T + F +DV + +NA
Sbjct: 36 FADPVDPEELPDYHDVIKHPMDFATVRKKLGNESSYTTLEQFESDVFLICSNA 88
>Glyma13g29430.2
Length = 566
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 43/69 (62%), Gaps = 3/69 (4%)
Query: 182 SLLKSMHDHADAWPFKEPVD--ARDVPDYYDIIKDPMDLKTMSKRVESEQYYVTFDMFVA 239
++LKS+ H+ +W F +PVD A +PDY+ II PMDL T+ ++E Y T + F
Sbjct: 85 TILKSLMSHSYSWVFLKPVDPVALSIPDYFTIISHPMDLGTIKSKLERNIYSGT-EEFAD 143
Query: 240 DVKRMFANA 248
DV+ F+NA
Sbjct: 144 DVRLTFSNA 152
>Glyma13g29430.1
Length = 566
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 43/69 (62%), Gaps = 3/69 (4%)
Query: 182 SLLKSMHDHADAWPFKEPVD--ARDVPDYYDIIKDPMDLKTMSKRVESEQYYVTFDMFVA 239
++LKS+ H+ +W F +PVD A +PDY+ II PMDL T+ ++E Y T + F
Sbjct: 85 TILKSLMSHSYSWVFLKPVDPVALSIPDYFTIISHPMDLGTIKSKLERNIYSGT-EEFAD 143
Query: 240 DVKRMFANA 248
DV+ F+NA
Sbjct: 144 DVRLTFSNA 152
>Glyma15g06570.1
Length = 536
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 47/98 (47%), Gaps = 6/98 (6%)
Query: 156 GYSRFNAFNTSTDSATNQKHWTAFMRS---LLKSMHDHADAWPFKEPVD--ARDVPDYYD 210
G R N++TD + + M+ +L+ + H W F PVD + DYYD
Sbjct: 131 GNKRPLPSNSATDLKRSHSEVGSLMKGCSQVLQKLMKHKHGWIFNAPVDVVGLQLTDYYD 190
Query: 211 IIKDPMDLKTMSKRVESEQYYVTFDMFVADVKRMFANA 248
+IK PMDL T+ + +Y D F +DV+ F NA
Sbjct: 191 VIKQPMDLGTVKSNLSMNKYTTPSD-FASDVRLTFNNA 227
>Glyma05g03070.1
Length = 666
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 49/91 (53%), Gaps = 6/91 (6%)
Query: 163 FNTSTDSATNQKHWTAFMR---SLLKSMHDHADAWPFKEPVDAR--DVPDYYDIIKDPMD 217
F ++ +A + M+ +LLK + H F +PVD ++PDY+ IIK PMD
Sbjct: 125 FISAKSAAPVTPSYAVLMKQCETLLKRVMSHQFGKVFDKPVDIVKWNIPDYFTIIKHPMD 184
Query: 218 LKTMSKRVESEQYYVTFDMFVADVKRMFANA 248
L T+ ++ S +Y D F ADV+ F+NA
Sbjct: 185 LGTVKSKLISCEYTSLMD-FAADVRLTFSNA 214
>Glyma14g02590.1
Length = 629
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
Query: 196 FKEPVDARDVPDYYDIIKDPMDLKTMSKRVESEQYYVTFDMFVADVKRMFANARTLEA 253
+ EPVD++++PDY+ +IK PMD T+ K++E+ Y T + F +DV + +NA A
Sbjct: 204 YAEPVDSKELPDYHKVIKHPMDFATVRKKLENGS-YPTLEQFESDVFLISSNAMQFNA 260
>Glyma02g34200.1
Length = 311
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 35/63 (55%)
Query: 175 HWTAFMRSLLKSMHDHADAWPFKEPVDARDVPDYYDIIKDPMDLKTMSKRVESEQYYVTF 234
H + +L +H F +PVD ++PDY+D+IK PMD T+ K++ +E Y T
Sbjct: 152 HRPLTLELILDKLHKKDTYGVFADPVDPEELPDYHDVIKHPMDFATVRKKLGNESSYTTL 211
Query: 235 DMF 237
+ F
Sbjct: 212 EQF 214