Jatropha Genome Database

JcCA0012121.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0012121.20 - phase: 0 /partial
         (177 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma05g19580.1                                                       337   3e-93
Glyma01g39440.1                                                       318   2e-87
Glyma04g33390.1                                                       118   4e-27
Glyma10g07140.1                                                        67   7e-12

>Glyma05g19580.1 
          Length = 557

 Score =  337 bits (865), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 158/177 (89%), Positives = 166/177 (93%)

Query: 1   GHEVDAFGVGTNLVTCFAQAALGCVFKLVEINNQPRIKLSEDVSKVSIPCKKRSYRLYGK 60
           GHEVDAFG+GT LVTC+AQAALG VFKLVEINNQPRIKLSEDVSKVSIPCKKR YRLYGK
Sbjct: 381 GHEVDAFGIGTYLVTCYAQAALGVVFKLVEINNQPRIKLSEDVSKVSIPCKKRCYRLYGK 440

Query: 61  EGYPLVDIMTGENEPSPKVGERILCRHPFNESKRAYVVPQKVEELLKCYWPGSLGKAREE 120
           EGYPLVDIMTGENEPSPKVGERILCRHPF ESKRAYVVPQ+VEELL+CYWPGS    ++ 
Sbjct: 441 EGYPLVDIMTGENEPSPKVGERILCRHPFQESKRAYVVPQRVEELLRCYWPGSTDIKKDT 500

Query: 121 LPPLKDIRDRCIKQLEQMRPDHMRRLNPTPYKVSVSAKLYDFIHFLWLNEAPVGELQ 177
           LP L+DIR+RCI QLEQMRPDHMRRLNPTPYKVSVSAKLYDFIHFLWLNEAPVGELQ
Sbjct: 501 LPALRDIRERCINQLEQMRPDHMRRLNPTPYKVSVSAKLYDFIHFLWLNEAPVGELQ 557


>Glyma01g39440.1 
          Length = 558

 Score =  318 bits (815), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 150/177 (84%), Positives = 163/177 (92%)

Query: 1   GHEVDAFGVGTNLVTCFAQAALGCVFKLVEINNQPRIKLSEDVSKVSIPCKKRSYRLYGK 60
           GHE+DA+G+GT LVTC+AQAALG VFKLVEINN+PRIK+SE VSKV+IPCKKR YRLYGK
Sbjct: 382 GHEIDAYGIGTYLVTCYAQAALGVVFKLVEINNKPRIKISEAVSKVTIPCKKRIYRLYGK 441

Query: 61  EGYPLVDIMTGENEPSPKVGERILCRHPFNESKRAYVVPQKVEELLKCYWPGSLGKAREE 120
           +GY LVDI+TGENEPSPKVGERILCRHPF ESKRAYVVP+KVEELL+CY  GS  K  E 
Sbjct: 442 DGYALVDILTGENEPSPKVGERILCRHPFEESKRAYVVPRKVEELLRCYCAGSSDKKEEI 501

Query: 121 LPPLKDIRDRCIKQLEQMRPDHMRRLNPTPYKVSVSAKLYDFIHFLWLNEAPVGELQ 177
           LPPLKDIR+RCIKQLEQMR DHMRRLNPTPYKVSVSAKLYDFIHFLWLNEAPVGEL+
Sbjct: 502 LPPLKDIRERCIKQLEQMRSDHMRRLNPTPYKVSVSAKLYDFIHFLWLNEAPVGELR 558


>Glyma04g33390.1 
          Length = 163

 Score =  118 bits (295), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 52/60 (86%), Positives = 57/60 (95%)

Query: 118 REELPPLKDIRDRCIKQLEQMRPDHMRRLNPTPYKVSVSAKLYDFIHFLWLNEAPVGELQ 177
           ++ LP L+DIR++CI QLEQMRPDHMRRLNPTPYKVSVSAKLYDFIHFLWLNEAPVGELQ
Sbjct: 104 KDTLPALRDIREQCINQLEQMRPDHMRRLNPTPYKVSVSAKLYDFIHFLWLNEAPVGELQ 163


>Glyma10g07140.1 
          Length = 225

 Score = 67.4 bits (163), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 29/38 (76%), Positives = 33/38 (86%)

Query: 116 KAREELPPLKDIRDRCIKQLEQMRPDHMRRLNPTPYKV 153
           K ++ LP L+DIR+RCI QLEQMR DHMRRLNPTPYKV
Sbjct: 96  KKKDSLPALRDIRERCINQLEQMRSDHMRRLNPTPYKV 133