Jatropha Genome Database

JcCA0011592.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0011592.10 - phase: 0 
         (234 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma10g36190.1                                                       438   e-123
Glyma20g31430.1                                                       436   e-123
Glyma16g27090.1                                                       374   e-104
Glyma02g08070.1                                                       357   6e-99
Glyma07g33580.1                                                        82   7e-16
Glyma02g14890.1                                                        80   1e-15

>Glyma10g36190.1 
          Length = 386

 Score =  438 bits (1126), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 207/234 (88%), Positives = 216/234 (92%)

Query: 1   MDLEAGRKRSGLEDIFISYHAEDDVQSTYAGALFHNGRNYHVSPSKKNDTLVYWSSSRCL 60
           MDLEAGRKRSG EDI+ISYHAEDDVQSTYAGALFHNGRNYHVS  K  D LVYWSSSRCL
Sbjct: 151 MDLEAGRKRSGREDIYISYHAEDDVQSTYAGALFHNGRNYHVSNKKNRDILVYWSSSRCL 210

Query: 61  AQRNQLAKSLLRLLPHHSFGKCLNNVGGLDMALNFYPECANDASVKPKWWDHLHCAMSHY 120
            QRN+LAK LL LLPHHSFGKCLNNVGGLDMAL+ YPECANDA+V PKWWDHLHCAMSHY
Sbjct: 211 PQRNELAKKLLSLLPHHSFGKCLNNVGGLDMALSLYPECANDANVTPKWWDHLHCAMSHY 270

Query: 121 KFVLAIENTVTESYVTEKLFYALDSGAVPIYFGAPNVDDFVPPHSIIDGTKFISMEELAS 180
           KFVLAIENT TESYVTEKLFYALDSGAVPIYFGAPNV DFVPPHSIIDG KF S+EELAS
Sbjct: 271 KFVLAIENTFTESYVTEKLFYALDSGAVPIYFGAPNVMDFVPPHSIIDGRKFNSLEELAS 330

Query: 181 YIKKLANDPVAYAEYHAWRRCGVLGNYGKTRLASLDTLPCRLCEAVSRKGGRNA 234
           Y+K +ANDPVAYAEYHAWRRCGVLGNYGKTR  SLDTLPCRLC++VSRKGGRNA
Sbjct: 331 YVKAVANDPVAYAEYHAWRRCGVLGNYGKTRAMSLDTLPCRLCDSVSRKGGRNA 384


>Glyma20g31430.1 
          Length = 403

 Score =  436 bits (1122), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 207/234 (88%), Positives = 216/234 (92%)

Query: 1   MDLEAGRKRSGLEDIFISYHAEDDVQSTYAGALFHNGRNYHVSPSKKNDTLVYWSSSRCL 60
           MDLEAGRKRSG EDI+ISYHAEDDVQSTYAGALFHNGRNYHVS  K  D LVYWSSSRCL
Sbjct: 168 MDLEAGRKRSGREDIYISYHAEDDVQSTYAGALFHNGRNYHVSNKKNRDILVYWSSSRCL 227

Query: 61  AQRNQLAKSLLRLLPHHSFGKCLNNVGGLDMALNFYPECANDASVKPKWWDHLHCAMSHY 120
            +RN+LAK LL LLPHHSFGKCLNNVGGLDMAL+ YPECANDA+V PKWWDHLHCAMSHY
Sbjct: 228 PRRNELAKKLLSLLPHHSFGKCLNNVGGLDMALSLYPECANDANVTPKWWDHLHCAMSHY 287

Query: 121 KFVLAIENTVTESYVTEKLFYALDSGAVPIYFGAPNVDDFVPPHSIIDGTKFISMEELAS 180
           KFVLAIENT TESYVTEKLFYALDSGAVPIYFGAPNV DFVPPHSIIDG KF S+EELAS
Sbjct: 288 KFVLAIENTFTESYVTEKLFYALDSGAVPIYFGAPNVMDFVPPHSIIDGRKFNSLEELAS 347

Query: 181 YIKKLANDPVAYAEYHAWRRCGVLGNYGKTRLASLDTLPCRLCEAVSRKGGRNA 234
           ++K +ANDPVAYAEYHAWRRCGVLGNYGKTR  SLDTLPCRLCEAVSRKGGRNA
Sbjct: 348 HVKAVANDPVAYAEYHAWRRCGVLGNYGKTRAVSLDTLPCRLCEAVSRKGGRNA 401


>Glyma16g27090.1 
          Length = 400

 Score =  374 bits (961), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 171/234 (73%), Positives = 195/234 (83%)

Query: 1   MDLEAGRKRSGLEDIFISYHAEDDVQSTYAGALFHNGRNYHVSPSKKNDTLVYWSSSRCL 60
           MDLE  RKRSG E+IFISYHA+DD+QSTYA +LFHNGRNYH+S  K N  LVYWSS  C 
Sbjct: 167 MDLEPKRKRSGREEIFISYHAKDDLQSTYASSLFHNGRNYHISSHKNNVPLVYWSSFPCT 226

Query: 61  AQRNQLAKSLLRLLPHHSFGKCLNNVGGLDMALNFYPECANDASVKPKWWDHLHCAMSHY 120
            QRN+LA  +L LLPHHS GKCLNNVGG + A   YPEC ++A+   KWW+HLHC MSHY
Sbjct: 227 TQRNKLAHKILSLLPHHSLGKCLNNVGGKNKAPRLYPECVDNAAKLTKWWNHLHCVMSHY 286

Query: 121 KFVLAIENTVTESYVTEKLFYALDSGAVPIYFGAPNVDDFVPPHSIIDGTKFISMEELAS 180
           KFVL IE T TESY+TEK+FYALDSGA+PIYFGAPN+ DFVPPHSII+G KF SMEELAS
Sbjct: 287 KFVLVIEGTWTESYITEKIFYALDSGAIPIYFGAPNIMDFVPPHSIIEGVKFKSMEELAS 346

Query: 181 YIKKLANDPVAYAEYHAWRRCGVLGNYGKTRLASLDTLPCRLCEAVSRKGGRNA 234
           Y+K +A+DP+AY E+HAWRRCGVLGNY KTR  SLDTLPCRLC A+S+KGGRNA
Sbjct: 347 YVKAIADDPIAYGEFHAWRRCGVLGNYAKTRALSLDTLPCRLCHAISKKGGRNA 400


>Glyma02g08070.1 
          Length = 393

 Score =  357 bits (916), Expect = 6e-99,   Method: Compositional matrix adjust.
 Identities = 172/234 (73%), Positives = 196/234 (83%)

Query: 1   MDLEAGRKRSGLEDIFISYHAEDDVQSTYAGALFHNGRNYHVSPSKKNDTLVYWSSSRCL 60
           MDLE+ RKRSG E++FISYHA+DD+QSTYA A+ HNGRNYH+S  K N  +VYWSSS C 
Sbjct: 158 MDLESKRKRSGREEVFISYHAKDDLQSTYASAILHNGRNYHISSHKNNVPVVYWSSSPCT 217

Query: 61  AQRNQLAKSLLRLLPHHSFGKCLNNVGGLDMALNFYPECANDASVKPKWWDHLHCAMSHY 120
            QRN+LA  LL LLPHHS GKCLNNVGG++ AL  YPEC ++ +   KWW+HLHC MSHY
Sbjct: 218 TQRNKLAHKLLSLLPHHSLGKCLNNVGGINKALRLYPECVDNTAKLTKWWNHLHCMMSHY 277

Query: 121 KFVLAIENTVTESYVTEKLFYALDSGAVPIYFGAPNVDDFVPPHSIIDGTKFISMEELAS 180
           KFVL IE T TESYVTEKLFYALDSGA+PIYFGAPN+ DFVPPHSII+G KF SMEELAS
Sbjct: 278 KFVLVIEGTWTESYVTEKLFYALDSGAIPIYFGAPNIMDFVPPHSIIEGVKFKSMEELAS 337

Query: 181 YIKKLANDPVAYAEYHAWRRCGVLGNYGKTRLASLDTLPCRLCEAVSRKGGRNA 234
           Y+K +A DPVAY E+HAWRRCGVL NY KTR  SLDTLPCRLC+A+S+KGGRNA
Sbjct: 338 YVKAIAEDPVAYGEFHAWRRCGVLDNYAKTRALSLDTLPCRLCQAISKKGGRNA 391


>Glyma07g33580.1 
          Length = 516

 Score = 81.6 bits (200), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 47/123 (38%), Positives = 67/123 (54%), Gaps = 4/123 (3%)

Query: 116 AMSHYKFVLAIENTVTESYVTEKLFYALDSGAVPIYFGAPNVDDFVP-PHSIIDGTKFIS 174
           A+ HYKF LA EN+  E YVTEK F +L +G +P+  GAPN+ DF P P SII   +   
Sbjct: 274 ALKHYKFSLAFENSNEEDYVTEKFFQSLVAGTIPVVVGAPNIQDFAPSPGSIIHIKEIED 333

Query: 175 MEELASYIKKLANDPVAYAEYHAWRRCGVLGNYGKTRLASLDTLPCRLC---EAVSRKGG 231
           +E +A  ++ LA +P AY +   W+  G   ++      +     CRLC     VSR+  
Sbjct: 334 VESVAKSMRYLAENPEAYNQSLRWKYEGPSDSFKALVDMAAVHSSCRLCIHLATVSREKE 393

Query: 232 RNA 234
            N+
Sbjct: 394 ENS 396


>Glyma02g14890.1 
          Length = 515

 Score = 80.5 bits (197), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 46/123 (37%), Positives = 67/123 (54%), Gaps = 4/123 (3%)

Query: 116 AMSHYKFVLAIENTVTESYVTEKLFYALDSGAVPIYFGAPNVDDFVP-PHSIIDGTKFIS 174
           A+ HYKF LA EN+  E YVTEK F +L +G +P+  GAPN+ DF P P SI+   +   
Sbjct: 273 ALKHYKFSLAFENSNEEDYVTEKFFQSLVAGTIPVVVGAPNIQDFAPSPGSILHIKEIED 332

Query: 175 MEELASYIKKLANDPVAYAEYHAWRRCGVLGNYGKTRLASLDTLPCRLC---EAVSRKGG 231
           +E +A  ++ LA +P AY +   W+  G   ++      +     CRLC     VSR+  
Sbjct: 333 VESVAKSMRYLAENPEAYNQSLRWKYEGPSDSFKALVDMAAVHSSCRLCIHLATVSREKE 392

Query: 232 RNA 234
            N+
Sbjct: 393 ENS 395