Jatropha Genome Database

JcCA0011081.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0011081.10 - phase: 0 
         (214 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma01g01910.1                                                       110   9e-25
Glyma01g01910.2                                                       110   9e-25
Glyma15g11910.1                                                        72   3e-13
Glyma09g01080.1                                                        72   6e-13

>Glyma01g01910.1 
          Length = 370

 Score =  110 bits (276), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 60/125 (48%), Positives = 74/125 (59%), Gaps = 9/125 (7%)

Query: 99  ITDEWGEKIEPNTESDYPKYADADPPVRDDEWEEEYAAAGNGSTSQSTGVVV-------- 150
           I+DEWGE  +P  E+   K  D+DPP  +DEW+E  A    G      G  V        
Sbjct: 78  ISDEWGEDYDPEAEALTSKLPDSDPPKDEDEWQEGGAPDAGGYVDGGNGTPVTGAEDPAE 137

Query: 151 -EKDDNVGDLKRILVDTVYGTNFGFQASPEIRAEVLELVNQLEAMNPTQTPVDAAEVLDG 209
            E DD +  LKR LVDT+YGT  G +A  E+RAEV ELV+QLEA NPT  PV+   +L+G
Sbjct: 138 EEVDDKLEALKRALVDTLYGTELGIRAGSEVRAEVSELVSQLEAANPTLAPVEEPALLNG 197

Query: 210 NWVLL 214
           NWVLL
Sbjct: 198 NWVLL 202


>Glyma01g01910.2 
          Length = 269

 Score =  110 bits (276), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 60/125 (48%), Positives = 74/125 (59%), Gaps = 9/125 (7%)

Query: 99  ITDEWGEKIEPNTESDYPKYADADPPVRDDEWEEEYAAAGNGSTSQSTGVVV-------- 150
           I+DEWGE  +P  E+   K  D+DPP  +DEW+E  A    G      G  V        
Sbjct: 78  ISDEWGEDYDPEAEALTSKLPDSDPPKDEDEWQEGGAPDAGGYVDGGNGTPVTGAEDPAE 137

Query: 151 -EKDDNVGDLKRILVDTVYGTNFGFQASPEIRAEVLELVNQLEAMNPTQTPVDAAEVLDG 209
            E DD +  LKR LVDT+YGT  G +A  E+RAEV ELV+QLEA NPT  PV+   +L+G
Sbjct: 138 EEVDDKLEALKRALVDTLYGTELGIRAGSEVRAEVSELVSQLEAANPTLAPVEEPALLNG 197

Query: 210 NWVLL 214
           NWVLL
Sbjct: 198 NWVLL 202


>Glyma15g11910.1 
          Length = 306

 Score = 72.4 bits (176), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 40/92 (43%), Positives = 53/92 (57%), Gaps = 11/92 (11%)

Query: 127 DDEWEEEYAAAGNGSTSQSTGVVVEK-----DDNVGDLKRILVDTVYGTNFGFQASPEIR 181
           DDEW  E   A  G      GV VE+     +     LK+ LVD+ YGT+ G +A+ E R
Sbjct: 51  DDEWGPEKEEAYGG------GVAVEEKPTKSETETEKLKKALVDSFYGTDRGLKATSETR 104

Query: 182 AEVLELVNQLEAMNPTQTPVDAAEVLDGNWVL 213
           AE++EL+ QLEA NP   P DA  +L+G W+L
Sbjct: 105 AEIVELITQLEAKNPNPVPTDALTLLNGKWIL 136


>Glyma09g01080.1 
          Length = 312

 Score = 71.6 bits (174), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 38/89 (42%), Positives = 52/89 (58%), Gaps = 6/89 (6%)

Query: 127 DDEW--EEEYAAAGNGSTSQSTGVVVEKDDNVGDLKRILVDTVYGTNFGFQASPEIRAEV 184
           DDEW  E+E  A G G   +        +     LK+ LVD+ YGT+ G +A+ E RAE+
Sbjct: 58  DDEWGPEKEEEAYGGGVAVEEK----PTETETEKLKKALVDSFYGTDLGLKATSETRAEI 113

Query: 185 LELVNQLEAMNPTQTPVDAAEVLDGNWVL 213
           +EL+ QLEA NP   P DA  +L+G W+L
Sbjct: 114 VELITQLEAKNPNPAPTDALTLLNGKWIL 142