Jatropha Genome Database

JcCA0009632.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0009632.10 + phase: 2 /partial
         (132 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma03g39050.1                                                       194   2e-50
Glyma19g41630.1                                                       183   5e-47
Glyma09g04100.1                                                       156   5e-39
Glyma15g40180.1                                                       103   5e-23
Glyma08g18710.1                                                       103   6e-23

>Glyma03g39050.1 
          Length = 321

 Score =  194 bits (492), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 92/132 (69%), Positives = 112/132 (84%), Gaps = 6/132 (4%)

Query: 1   VFLAALVGMDKEEKVRVLDHLAKNMARGAMLLLRSANGARAFLYPVVDPCDLQGFEVLSV 60
           V+LAALVGMDKE K R++DHL K+M  GA+L+LRSA+GARAFLYPVV+PCDL+GFEVLSV
Sbjct: 196 VYLAALVGMDKEGKNRIIDHLGKHMNPGALLMLRSAHGARAFLYPVVEPCDLRGFEVLSV 255

Query: 61  FHPTDEVINSVIIARKLDYGYNDHQIKPLHDLQQQGLVSNLILPTKCSEIEAFNPLNHGN 120
           FHP+DEV+NSV+IARKL      +   P+H L QQ LV ++ILP KCSEI+AFNPLNHGN
Sbjct: 256 FHPSDEVVNSVVIARKL------YHPVPMHSLDQQALVGSMILPNKCSEIQAFNPLNHGN 309

Query: 121 MVEELTIEEKLS 132
           M+EEL +EE+LS
Sbjct: 310 MIEELAVEEQLS 321


>Glyma19g41630.1 
          Length = 315

 Score =  183 bits (464), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 90/131 (68%), Positives = 108/131 (82%), Gaps = 12/131 (9%)

Query: 1   VFLAALVGMDKEEKVRVLDHLAKNMARGAMLLLRSANGARAFLYPVVDPCDLQGFEVLSV 60
           V+LAALVGMDKE K R++DHL K+M  GA+L+LRSA+GARAFLYPVV+PCD +GFEVLSV
Sbjct: 196 VYLAALVGMDKEGKNRIIDHLGKHMNPGALLMLRSAHGARAFLYPVVEPCDFRGFEVLSV 255

Query: 61  FHPTDEVINSVIIARKLDYGYNDHQIKPLHDLQQQGLVSNLILPTKCSEIEAFNPLNHGN 120
           FHP+DEVINSV+IARKL            H L +QGLV ++ILP KCSEI+AFNPLNHGN
Sbjct: 256 FHPSDEVINSVVIARKL-----------YHSL-EQGLVGSMILPNKCSEIQAFNPLNHGN 303

Query: 121 MVEELTIEEKL 131
           M+EEL +EE+L
Sbjct: 304 MIEELAVEEQL 314


>Glyma09g04100.1 
          Length = 309

 Score =  156 bits (395), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 82/131 (62%), Positives = 98/131 (74%), Gaps = 20/131 (15%)

Query: 1   VFLAALVGMDKEEKVRVLDHLAKNMARGAMLLLRSANGARAFLYPVVDP-CDLQGFEVLS 59
           VFLAALVGMD +EK RV+ HLAK MA GA+LLLRSA+GARAFLYPVVDP  DL+GFEVLS
Sbjct: 197 VFLAALVGMDHKEKGRVISHLAKFMAPGAILLLRSAHGARAFLYPVVDPSSDLKGFEVLS 256

Query: 60  VFHPTDEVINSVIIARKLDYGYNDHQIKPLHDLQQQGLVSNLILPTKCSEIEAFNPLNHG 119
           VFHPTDEVINSVI+ARK                   GL S+ +L +KCS +E FN  NHG
Sbjct: 257 VFHPTDEVINSVIVARK-------------------GLYSSPVLASKCSGVEGFNHFNHG 297

Query: 120 NMVEELTIEEK 130
           N++EELT++++
Sbjct: 298 NVIEELTVDDQ 308


>Glyma15g40180.1 
          Length = 286

 Score =  103 bits (257), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 46/76 (60%), Positives = 62/76 (81%)

Query: 1   VFLAALVGMDKEEKVRVLDHLAKNMARGAMLLLRSANGARAFLYPVVDPCDLQGFEVLSV 60
           +FLAALVGM +E KV++L H+ K M  G +LL+RSA GARAFLYP+V+  D+  FEVL++
Sbjct: 208 IFLAALVGMSREAKVKILGHIRKYMKEGGVLLVRSAKGARAFLYPIVEERDMVNFEVLTI 267

Query: 61  FHPTDEVINSVIIARK 76
           FHPT++VINSV++ RK
Sbjct: 268 FHPTNDVINSVVLLRK 283


>Glyma08g18710.1 
          Length = 286

 Score =  103 bits (256), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 46/76 (60%), Positives = 61/76 (80%)

Query: 1   VFLAALVGMDKEEKVRVLDHLAKNMARGAMLLLRSANGARAFLYPVVDPCDLQGFEVLSV 60
           +FLAALVGM +E KV++L H+ K M  G  LL+RSA GARAFLYP+V+  D+  FEVL++
Sbjct: 208 IFLAALVGMSREAKVKILGHIRKYMKEGGTLLVRSAKGARAFLYPIVEERDMVNFEVLTI 267

Query: 61  FHPTDEVINSVIIARK 76
           FHPT++VINSV++ RK
Sbjct: 268 FHPTNDVINSVVLLRK 283