Jatropha Genome Database

JcCA0007981.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0007981.20 - phase: 0 
         (287 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g11860.1                                                       398   e-111
Glyma01g05540.1                                                       387   e-108

>Glyma02g11860.1 
          Length = 286

 Score =  398 bits (1022), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 191/287 (66%), Positives = 227/287 (79%), Gaps = 1/287 (0%)

Query: 1   MDLSEIAKKLGLSESKNLIRKAAELRRLCDVQFDSSIIGVGEVSKAIICLEIAATRFQVI 60
           MD+SE+AKKLGLS+SK L+RKAAELRRLCDVQFDSS+IGVGEV+K++ICLEIAATR  V+
Sbjct: 1   MDVSELAKKLGLSDSKLLVRKAAELRRLCDVQFDSSVIGVGEVAKSLICLEIAATRLGVL 60

Query: 61  FDRQAAIRLSGLSEKAYTRSFNSLQNSLGVKTKLDIRELGIQFGCIRLIPLVKKGLSLYK 120
           FDR +A+RLSG+SE+AY RS+NSL N LGVK KLD+REL IQFGC+R+IP V+ GL LYK
Sbjct: 61  FDRSSAVRLSGMSERAYIRSYNSLHNGLGVKMKLDVRELAIQFGCVRIIPFVRDGLKLYK 120

Query: 121 ERFLASLPATRRASADFTRPVFTAVAFYLCAXXXXXXXXXXXXXEVCGTSESEFKSVSTS 180
           +RF++SLPA+RRASADFTRPVFTAVAFYLCA             E+CGTSESEF SVS +
Sbjct: 121 DRFVSSLPASRRASADFTRPVFTAVAFYLCAKKHKLKVDKLKLIELCGTSESEFSSVSAT 180

Query: 181 MNDLCYDVFGISKEKKDPREVKGNRELLDVLPEKRKFEDGGYLSDDGAELSSYKKRKTAE 240
           M DLC+DVFG++KEKKDP+EV+ NR+LLDVLP KRK EDGGY S+DG ELSSYKK K  E
Sbjct: 181 MKDLCHDVFGVAKEKKDPKEVQSNRDLLDVLPSKRKAEDGGYSSEDGPELSSYKKAKKME 240

Query: 241 KVAYQEWXXXXXXXXXXXXXXGPCKQTRQTRLNFFKEVPETAGLEAL 287
           K  Y++W               PCK+TRQT LNF KE  +   LEA+
Sbjct: 241 KHDYEKW-KSSVLSSNKQNKKAPCKRTRQTSLNFLKEPSDNQELEAI 286


>Glyma01g05540.1 
          Length = 286

 Score =  387 bits (995), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 185/287 (64%), Positives = 224/287 (78%), Gaps = 1/287 (0%)

Query: 1   MDLSEIAKKLGLSESKNLIRKAAELRRLCDVQFDSSIIGVGEVSKAIICLEIAATRFQVI 60
           MD+SE+AKKLGLS+SK ++RKAAELRRLC+VQFDSS+IGVGEV+K+IICLEIAA R  ++
Sbjct: 1   MDVSELAKKLGLSDSKLVVRKAAELRRLCEVQFDSSVIGVGEVAKSIICLEIAAMRLSIL 60

Query: 61  FDRQAAIRLSGLSEKAYTRSFNSLQNSLGVKTKLDIRELGIQFGCIRLIPLVKKGLSLYK 120
           FDR +A RLSG+SE+AY RS+NSL N LGVK KLD+REL IQFGC+R+I LV+ GL LYK
Sbjct: 61  FDRSSAARLSGMSERAYIRSYNSLHNGLGVKMKLDVRELAIQFGCVRIITLVRDGLKLYK 120

Query: 121 ERFLASLPATRRASADFTRPVFTAVAFYLCAXXXXXXXXXXXXXEVCGTSESEFKSVSTS 180
           +RF++SLPA+RRASADFTRPVFTAVAFYLCA             E+CGTSESEF SVS +
Sbjct: 121 DRFVSSLPASRRASADFTRPVFTAVAFYLCAKKHKLKVDKLKLIELCGTSESEFSSVSAT 180

Query: 181 MNDLCYDVFGISKEKKDPREVKGNRELLDVLPEKRKFEDGGYLSDDGAELSSYKKRKTAE 240
           M DLC+DVFG++KEKKDP++V+ NR+LLDVLP KRK EDGGY SDDG ELSSYKK K  E
Sbjct: 181 MKDLCHDVFGVAKEKKDPKQVQSNRDLLDVLPSKRKAEDGGYSSDDGPELSSYKKAKKME 240

Query: 241 KVAYQEWXXXXXXXXXXXXXXGPCKQTRQTRLNFFKEVPETAGLEAL 287
           K  +++W               PCK+TRQT LNF  +  +   LEA+
Sbjct: 241 KRDFEKW-KSSVLASNEQNKKAPCKRTRQTSLNFLNKASDNQELEAM 286