Jatropha Genome Database

JcCA0006671.40
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0006671.40 - phase: 0 
         (206 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g43610.1                                                       132   3e-31
Glyma09g32220.1                                                       122   3e-28
Glyma08g22060.1                                                       107   7e-24
Glyma08g22050.1                                                        93   2e-19
Glyma07g09580.1                                                        70   2e-12
Glyma18g45080.1                                                        49   3e-06

>Glyma13g43610.1 
          Length = 150

 Score =  132 bits (331), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 72/151 (47%), Positives = 108/151 (71%), Gaps = 2/151 (1%)

Query: 48  SKPMIITI-ICLLFIPALVYLLWPSDPNLRIVRLSLNKIHIHTLPIINIDVSLYVTIKVR 106
           S+  ++T+ + +L + + +Y+ WPS P+L+IV L L +I +H +P I ID+S+ +T++V 
Sbjct: 1   SRRRVVTLAVGVLILLSALYIFWPSGPDLKIVGLKLRRIKVHPVPPITIDISMLLTLRVH 60

Query: 107 NVDVYSMDLRRLDVALAYRGKRLGHVKVKGKGHVSALGSSYVDTELEFSGVRILSDVVFL 166
           NVDVY MD   ++VA+AYRGK LGHV  + + HV A GSSYVD ++EF+G+ +L ++V L
Sbjct: 61  NVDVYFMDFGAVNVAVAYRGKMLGHVTSR-RMHVRARGSSYVDADVEFAGISVLPELVLL 119

Query: 167 LEDLAKGRVPFDTVIKVSGELGFLGLEFPFK 197
           LED+A+G VPFDT+    G+LG L   FP K
Sbjct: 120 LEDVARGIVPFDTISHAKGQLGLLFFHFPIK 150


>Glyma09g32220.1 
          Length = 257

 Score =  122 bits (306), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 68/174 (39%), Positives = 100/174 (57%), Gaps = 5/174 (2%)

Query: 30  QNYIVLPFHHHPTTFRGPSKPMII---TIICLLFIPALVYLLWPSDPNLRIVRLSLNKIH 86
           QN +VL   + P  F+   +  II    +   L +    +LL+PSDP +R+ R+ L++I 
Sbjct: 48  QNVVVLLPSYRPH-FQRRRRRCIIYSAALFLFLLVAGAAFLLYPSDPEIRLARIRLDRIG 106

Query: 87  IHTLPIINIDVSLYVTIKVRNVDVYSMDLRRLDVALAYRGKRLGHVKVKGKGHVSALGSS 146
           I T P   +D+S  +T+KVRN D +S+    L V++ YRG++LG V   G G + A GSS
Sbjct: 107 IRTNPRPILDLSFSLTVKVRNRDFFSLSYDSLTVSVGYRGRQLGFV-TAGGGSIRARGSS 165

Query: 147 YVDTELEFSGVRILSDVVFLLEDLAKGRVPFDTVIKVSGELGFLGLEFPFKVII 200
           YVD  L   G  ++ D  +LLED+AKG +PFDT  +V G+LG      P K  +
Sbjct: 166 YVDATLTIDGFEVIYDAFYLLEDIAKGVIPFDTDTRVEGKLGLFFFTVPLKATV 219


>Glyma08g22060.1 
          Length = 145

 Score =  107 bits (268), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 50/129 (38%), Positives = 86/129 (66%), Gaps = 2/129 (1%)

Query: 68  LWPSDPNLRIVRLSLNKIHIHTLPIINIDVSLYVTIKVRNVDVYSMDLRRLDVALAYRGK 127
           +WP  P L+I R+ + ++ +  +P +  DVS+ ++++VRN D+Y M++R +DV + YR K
Sbjct: 14  IWPWYPELKIERMEVKRVKVRPVPPVGADVSISMSVRVRNRDIYWMEMREVDVGMKYRRK 73

Query: 128 RLGHVKVKGKGHVSALGSSYVDTELEFSGVRILSDVVFLLEDLAKGRVPFDTVIKVSGEL 187
           ++GHV++KG   V    S++V+ E+ F+ +   S V +LLED+AKG+V F TV+++SG+ 
Sbjct: 74  KMGHVELKG-WQVKGWSSTHVEAEVVFAEL-PSSQVPYLLEDVAKGKVYFRTVVELSGQF 131

Query: 188 GFLGLEFPF 196
           G L    P 
Sbjct: 132 GILSFRTPL 140


>Glyma08g22050.1 
          Length = 174

 Score = 92.8 bits (229), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 47/114 (41%), Positives = 77/114 (67%), Gaps = 2/114 (1%)

Query: 63  ALVYLLWPSDPNLRIVRLSLNKIHIHTLPIINIDVSLYVTIKVRNVDVYSMDLRRLDVAL 122
           A V +LWP +P L+I R+++ ++ +H +P ++ DV + ++++V+N  +Y M+L  +DV +
Sbjct: 29  AGVLVLWPWEPELKIERMNVKRVKVHPIPPVSADVWISLSVRVQNRCMYWMELTDVDVGV 88

Query: 123 AYRGKRLGHVKVKGKGHVSALGSSYVDTELEFSGVRILSDVVFLLEDLAKGRVP 176
            YRGK++GHV+ +G  HV    S+ VD  LEFSG+   S+V  LL+DLA G  P
Sbjct: 89  KYRGKKMGHVESEG-WHVRGWASTKVDGVLEFSGLPS-SEVAHLLQDLAMGLRP 140


>Glyma07g09580.1 
          Length = 130

 Score = 70.1 bits (170), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 41/98 (41%), Positives = 58/98 (59%), Gaps = 1/98 (1%)

Query: 109 DVYSMDLRRLDVALAYRGKRLGHVKVKGKGHVSALGSSYVDTELEFSGVRILSDVVFLLE 168
           D +S+    L V++ YRG++LG V   G G + A GSSYVD  L   G  ++ D  +LLE
Sbjct: 1   DFFSLTYDTLAVSVGYRGRQLGFVTGGGGGRIRARGSSYVDATLTIDGFEVIYDAFYLLE 60

Query: 169 DLAKGRVPFDTVIKVSGELGFLGLEFPFKVII-FQVYI 205
           D+AKG +PFDT  +V G+LG      P K  +  +VY+
Sbjct: 61  DIAKGVIPFDTDTRVEGKLGLFFFTVPLKATVSCEVYV 98


>Glyma18g45080.1 
          Length = 221

 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 65/128 (50%), Gaps = 4/128 (3%)

Query: 67  LLWPSDPNLRIVRLSLNKIHIH-TLPIIN--IDVSLYVTIKVRNVDVYSMDLRRLDVALA 123
           L    +P  ++V  +L  I    TLP I+  I+V+L + ++V N +  S+        L 
Sbjct: 61  LFKTKEPRTQLVSATLEGIAPRLTLPAIDLQINVTLDLKVRVENRNRASLKHEGGKSVLL 120

Query: 124 YRGKRLGHVKVKGKGHVSALGSSYVDTELEFSGVRILSDVVFLLEDLAKGRVPFDTVIKV 183
           Y+GK +G   +   G + + GS+ +   L     ++ S++  L+ DL  G +  DTV ++
Sbjct: 121 YKGKEVGDAYI-NPGLIPSRGSTILPCRLTLQVEKLASNLTSLVGDLMGGEISMDTVTRI 179

Query: 184 SGELGFLG 191
            G++ FLG
Sbjct: 180 PGKVTFLG 187