Jatropha Genome Database

JcCA0006671.30
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0006671.30 - phase: 0 
         (157 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma15g15090.1                                                        47   6e-06

>Glyma15g15090.1 
          Length = 226

 Score = 47.4 bits (111), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 59/128 (46%), Gaps = 5/128 (3%)

Query: 6   SLKEICAVTEKPAKCVSCLAPFLAGSPTDAVTVLNMFIEAIYKHVERSISLLEKETKKPS 65
           S+K+IC+ T+ P  CVS + PFL G   D + VL   I+A     + +IS++ K  K   
Sbjct: 83  SVKDICSHTDYPDVCVSTITPFL-GQNFDLMNVLEAAIKACSYQAKFTISVVAKHMKVS- 140

Query: 66  QLPVLTTCLDTCIESYDKIKIELVKAEDSCAAHDVDXXXXXXXXXISKFGQCDESFHKNG 125
             P +   L  C E Y      L +A D+  + D+          ++    C+  F ++ 
Sbjct: 141 --PEIAAALGDCKEQYSDALENLHRAMDAIQSQDLGTVTTMLSAVMADVSACESGFEEHK 198

Query: 126 MGESPMSE 133
           +  SPM+ 
Sbjct: 199 VA-SPMAH 205