Jatropha Genome Database

JcCA0006671.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0006671.20 - phase: 0 
         (236 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma09g04080.1                                                        60   1e-09
Glyma15g15090.1                                                        60   2e-09
Glyma02g01490.1                                                        58   1e-08
Glyma10g01530.1                                                        49   4e-06
Glyma03g37900.1                                                        49   4e-06
Glyma15g13440.1                                                        49   5e-06

>Glyma09g04080.1 
          Length = 247

 Score = 60.5 bits (145), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 47/156 (30%), Positives = 75/156 (48%), Gaps = 19/156 (12%)

Query: 59  TFKHRTVTSPNSPSLTVKVDPK------IKRICAATESPEKCISLITPYLEGSVNPVSTL 112
           T +  T+T P+        DPK      +K IC+ T+ PE C+S ITP++   ++ ++ L
Sbjct: 84  TLRGHTITMPDH-------DPKASHHRSVKDICSHTDYPEVCVSTITPFVGNDLDLMNVL 136

Query: 113 KAIIKMLQVTVEDT-SKIAKDVRADVSTSSAIKGALDANLDLYDRAIDNLAEASSAFSAG 171
           +A IK        T S +AK ++A    S  +  AL+   + Y  A++NL  A  A  + 
Sbjct: 137 EAAIKACSFQANFTISVVAKHMKA----SPEMAAALEDCKEQYTSALENLHRAMEAIPSR 192

Query: 172 DFPKVKDMLGAAISNLGYCNDAFLKNGL-LSWPLKE 206
           D   V  ML A ++++  C   F +    LS P  E
Sbjct: 193 DLGTVTVMLSAVLADVSACESGFEEQKTALSMPHSE 228


>Glyma15g15090.1 
          Length = 226

 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 48/174 (27%), Positives = 84/174 (48%), Gaps = 15/174 (8%)

Query: 59  TFKHRTVTSPNSPSLTVKVDPKIKRICAATESPEKCISLITPYLEGSVNPVSTLKAIIKM 118
           T +  T+T P    LT      +K IC+ T+ P+ C+S ITP+L  + + ++ L+A IK 
Sbjct: 63  TLRGNTITMPEH-DLTATDHHSVKDICSHTDYPDVCVSTITPFLGQNFDLMNVLEAAIKA 121

Query: 119 LQVTVEDT-SKIAKDVRADVSTSSAIKGALDANLDLYDRAIDNLAEASSAFSAGDFPKVK 177
                + T S +AK ++     S  I  AL    + Y  A++NL  A  A  + D   V 
Sbjct: 122 CSYQAKFTISVVAKHMK----VSPEIAAALGDCKEQYSDALENLHRAMDAIQSQDLGTVT 177

Query: 178 DMLGAAISNLGYCNDAFLKNGLLSWPLKETNELMIEFAGYGIDISSKLRLGIAT 231
            ML A ++++  C   F ++ + S P+  +  +        + I++ + L IA+
Sbjct: 178 TMLSAVMADVSACESGFEEHKVAS-PMAHSEGM--------VSITASICLSIAS 222


>Glyma02g01490.1 
          Length = 215

 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 62/141 (43%), Gaps = 6/141 (4%)

Query: 79  PKIKRICAATESPEKCISLITPYLEGSVNPVSTLKAIIKMLQVTVEDTSKIAKDVRADVS 138
           P I + C  TE+P  C   I PYL G+ +P+  L+  I     T+E   +IA +++  + 
Sbjct: 63  PMILKFCTGTENPTLCAETIAPYLTGTFDPIQALETEI---NATLEKAEEIAGNIKKMLD 119

Query: 139 TSSAIKGALDA---NLDLYDRAIDNLAEASSAFSAGDFPKVKDMLGAAISNLGYCNDAFL 195
             +  K A+DA       YD  +DN+ E        +         + +S    C DAF 
Sbjct: 120 DPTTTKNAMDALGICQSQYDNILDNIKETVELVGNQNVVDAWYRFSSVLSYKEACEDAFK 179

Query: 196 KNGLLSWPLKETNELMIEFAG 216
           ++  +  P  E N  + + +G
Sbjct: 180 ESPGVDMPFPEDNTKLFQLSG 200


>Glyma10g01530.1 
          Length = 216

 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 33/134 (24%), Positives = 60/134 (44%), Gaps = 6/134 (4%)

Query: 76  KVDPKIKRICAATESPEKCISLITPYLEGSVNPVSTLKAIIKMLQVTVEDTSKIAKDVRA 135
           +  P+I + C+ TE    C   I PYL G  +P   LKA+   +  ++E   +I  +++ 
Sbjct: 61  QFSPEILKFCSGTEHAALCAETIAPYLAGEFDP---LKALEMEINASMEKAKEIGGNIKK 117

Query: 136 DVSTSSAIKGALDA---NLDLYDRAIDNLAEASSAFSAGDFPKVKDMLGAAISNLGYCND 192
            +   +  K A+DA       YD  +D++ E        +    +  L + +S    C+D
Sbjct: 118 MLDNPATEKKAIDALGICQSQYDDMVDSMKEGVDLVRQQNVVDARYKLSSVLSYKSACDD 177

Query: 193 AFLKNGLLSWPLKE 206
           AF ++  +  P  E
Sbjct: 178 AFTESPGVHIPFPE 191


>Glyma03g37900.1 
          Length = 223

 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 37/148 (25%), Positives = 67/148 (45%), Gaps = 7/148 (4%)

Query: 78  DPKIKRICAATESPEKCISLITPYLEGSVNPVSTLKAIIKMLQVTVEDTSKIAKDVRA-- 135
           +PK+   C +TE+P  C   I P+ +GS      +KA++  ++ T   T K+A DV A  
Sbjct: 65  NPKVLDFCKSTENPTLCGDTIAPFFQGSF--FDPIKALLNEVEATHNQTLKVA-DVIANT 121

Query: 136 --DVSTSSAIKGALDANLDLYDRAIDNLAEASSAFSAGDFPKVKDMLGAAISNLGYCNDA 193
             D +T+   +  LD     Y   +  + EA    +  +         + IS+   C DA
Sbjct: 122 LNDPNTNRNAREPLDICRSRYKSIVSTIKEAVELLNQQNVVDAYYKFSSVISDQTTCEDA 181

Query: 194 FLKNGLLSWPLKETNELMIEFAGYGIDI 221
           F+++    +P  + +  + + AG  + I
Sbjct: 182 FVESPGAQFPFPDDSLTVYQLAGNCLAI 209


>Glyma15g13440.1 
          Length = 210

 Score = 48.9 bits (115), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 40/149 (26%), Positives = 62/149 (41%), Gaps = 18/149 (12%)

Query: 81  IKRICAATESPEKCISLITP-YLEGSVNPVSTLKAIIKMLQVTVEDTSKIAKDVRADVST 139
           I   C  T +P  C   I P +L+ +++P       +K L V V+ T   AK    D+ T
Sbjct: 41  ITEFCKKTTNPAVCAQTIQPHFLKNNLDP-------LKALDVEVDATLASAKKTLIDIQT 93

Query: 140 -------SSAIKGALDANLDLYDRAIDNLAEASSAFSAGDFPKVKDMLGAAISNLGYCND 192
                  + +IK + D   D Y   +D + E  +A +  D    K    A +S  G C D
Sbjct: 94  LESKKGITKSIKDSFDTCKDQYGSMLDAIKETKAAIAKKDIITAKFKFSAVLSYQGACKD 153

Query: 193 AFLKNGLLSWPLKETNELMIEFAGYGIDI 221
           AF    +   P  E ++ +    G  +DI
Sbjct: 154 AFESGKI---PFSEDSDAVYNLGGNCLDI 179