Jatropha Genome Database
- JcCA0003732.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0003732.10 + phase: 1 /pseudo/partial
(434 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma18g05840.1 145 1e-34
Glyma11g31270.1 141 1e-33
Glyma03g04330.1 139 7e-33
Glyma01g32810.1 131 2e-30
Glyma14g38490.1 107 3e-23
Glyma02g40280.1 83 7e-16
Glyma13g31970.1 80 4e-15
Glyma17g25650.1 79 7e-15
Glyma15g07350.1 76 9e-14
>Glyma18g05840.1
Length = 897
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 87/159 (54%), Positives = 103/159 (64%), Gaps = 31/159 (19%)
Query: 1 TFSRIDPGGKLVMGFRKATNNSLDTQDAQTSTIPNSAAITEAS----------------- 43
TFSRIDPGGKLVMGFRKA+N S DTQDA TS NSA T +S
Sbjct: 421 TFSRIDPGGKLVMGFRKASN-STDTQDASTSAQSNSAKGTVSSGTENLPSGRNVECHLNG 479
Query: 44 ----------FSGIVTSENHGGRVNGDALLQPTS--EKKRTRNIGPKNKRLLMNSEDALE 91
+G++ +EN+ N + Q S EKKRTRNIGPK+KRLL+++EDA+E
Sbjct: 480 HTEHLHLGTGTAGLLKTENNE-MTNSSSPQQQISVLEKKRTRNIGPKSKRLLIDNEDAME 538
Query: 92 LRLTWEEAQDLLRPPPSVKPSIVAIEDHEFEEYDXATSF 130
L+LTWEEAQDLLRPPPSVKPSIV IED EEYD +T+
Sbjct: 539 LKLTWEEAQDLLRPPPSVKPSIVTIEDQVIEEYDVSTTV 577
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 57/99 (57%), Gaps = 2/99 (2%)
Query: 336 RKQTEVAETSAGQIDLNCHPNGEDIQMDIPGLSIMD-LADAANMPFDNYIKENGLSSLMC 394
+ Q EV +SAGQIDLN HPN ED+Q++ GL++ L A N ++ +NGL +
Sbjct: 784 KSQHEVGGSSAGQIDLNSHPNREDMQVETTGLNMSSHLEPATNHTVGEFMNQNGLRNFNN 843
Query: 395 DRQASLGSCSHS-QSDGENLRRLSDEAFLASIGWDRESR 432
+ Q S H+ +S+GE R SD ASI W++E +
Sbjct: 844 EVQTGQNSSLHTPKSNGEGQRYFSDGRCFASIMWNQERK 882
>Glyma11g31270.1
Length = 537
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 86/164 (52%), Positives = 100/164 (60%), Gaps = 40/164 (24%)
Query: 1 TFSRIDPGGKLVMGFRKATNNSLDTQDAQTSTIPNSAAITEASFS-GIVTSENHGGRVN- 58
TFSRIDPGGKLVMGFRKA+ NS DTQDA TS NSA T +S + + + NH ++
Sbjct: 45 TFSRIDPGGKLVMGFRKAS-NSTDTQDASTSAQSNSAKGTISSGTENLPSGSNHANLLHS 103
Query: 59 --------------------GDALLQPTS-----------------EKKRTRNIGPKNKR 81
G A L T EKKRTRNIGPK+KR
Sbjct: 104 LTGNVETHLNGHTEHLHLGTGTAGLLKTENNEMTNSSSPQQQISVLEKKRTRNIGPKSKR 163
Query: 82 LLMNSEDALELRLTWEEAQDLLRPPPSVKPSIVAIEDHEFEEYD 125
LL+++EDA+EL+LTWEEAQDLLRPPPSVKP+IV IED FEEYD
Sbjct: 164 LLIDNEDAMELKLTWEEAQDLLRPPPSVKPNIVTIEDQVFEEYD 207
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 61/112 (54%), Gaps = 4/112 (3%)
Query: 325 TDKLDNERNPNRKQTEVAETSAGQIDLNCHPNGEDIQMDIPGLSIMD-LADAANMPFDNY 383
T +L+ E N+ Q +V E+S GQIDLN HPN ED+Q++ GL++ L A N +
Sbjct: 411 TSRLEKEVGLNKSQHQVGESSTGQIDLNSHPNREDMQVETTGLNMSSHLEPATNHTVGEF 470
Query: 384 IKENGL-SSLMCDRQASLGSCSHS--QSDGENLRRLSDEAFLASIGWDRESR 432
+ +N L S + Q S H+ QS GE R SD ASI W++E +
Sbjct: 471 MDKNDLRRSFNNEVQTGQNSSLHTPPQSSGEGQRYFSDGRCFASIVWNQERK 522
>Glyma03g04330.1
Length = 874
Score = 139 bits (349), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 83/173 (47%), Positives = 101/173 (58%), Gaps = 44/173 (25%)
Query: 1 TFSRIDPGGKLVMGFRKATNNSLDTQDAQTSTIPNSAAITEASFSGIV------------ 48
TFSR+DP GKL+MGFRKATN S Q+ S +PN + +E S+SG+
Sbjct: 342 TFSRMDPEGKLIMGFRKATN-STAVQETLPSNMPNGSHSSETSYSGVYENLPILSGYSGL 400
Query: 49 ------TSENH-----------GGRVNGDALLQPTS--------------EKKRTRNIGP 77
SE H GG +N ++ P S EKKRTRNIG
Sbjct: 401 LQSQKGCSETHLNALSKKWNSAGGDMNWHSIDMPESRKRDGLPLPPVMVPEKKRTRNIGS 460
Query: 78 KNKRLLMNSEDALELRLTWEEAQDLLRPPPSVKPSIVAIEDHEFEEYDXATSF 130
K+KRLL++S+DALEL+LTWEEAQDLLRPPP+VKPSIV IEDH FEEY+ F
Sbjct: 461 KSKRLLIDSQDALELKLTWEEAQDLLRPPPTVKPSIVMIEDHVFEEYEEPPVF 513
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 71/125 (56%), Gaps = 19/125 (15%)
Query: 317 KDDSE-------MSPTDKLDNERNPNRKQTE---------VAETSAGQIDLNCHPNGEDI 360
KD+SE ++P D L+NE R Q E VAE + GQ+DLNC P+ ED+
Sbjct: 708 KDESEVDSTSRHLTPVDGLENEV---RVQNELDSRSPDDAVAEAAKGQLDLNCQPDREDV 764
Query: 361 QMDIPGLSIMDLADAANMPFDNYIKENGLSSLMCDRQASLGSCSHSQSDGENLRRLSDEA 420
Q LS+ L + AN+P + Y+K+NGL+SL+ ++Q + S +Q+ ++ + +++
Sbjct: 765 QAGPNSLSMTSLLEEANLPLETYLKQNGLTSLITEQQTNSASNVQAQTTNDSEVKHNEDC 824
Query: 421 FLASI 425
AS+
Sbjct: 825 GTASL 829
>Glyma01g32810.1
Length = 783
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 74/136 (54%), Positives = 93/136 (68%), Gaps = 6/136 (4%)
Query: 1 TFSRIDPGGKLVMGFRKATNNS-LDTQDAQTSTIPNSAAITEASFSGIVTSEN---HGGR 56
TFSR+DP GKL+MGFRKATN++ + Q + T N+ + S G ++ N R
Sbjct: 316 TFSRMDPEGKLIMGFRKATNSTAVQLQKGCSETHLNALSKKWNSAGGDMSWHNIDMPESR 375
Query: 57 VNGDALLQPT--SEKKRTRNIGPKNKRLLMNSEDALELRLTWEEAQDLLRPPPSVKPSIV 114
+ L P EKKRTRNIG K+KRLL++S+DALEL+LTWEEAQD+LRPPP+VKPSIV
Sbjct: 376 KRDELPLPPVMVPEKKRTRNIGSKSKRLLIDSQDALELKLTWEEAQDMLRPPPTVKPSIV 435
Query: 115 AIEDHEFEEYDXATSF 130
IEDH FEEY+ F
Sbjct: 436 MIEDHVFEEYEEPPVF 451
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 74/131 (56%), Gaps = 19/131 (14%)
Query: 317 KDDSE-------MSPTDKLDNERNPNRKQTE---------VAETSAGQIDLNCHPNGEDI 360
KD+SE ++P D+L+NE R Q E VAE + GQ+DLNC P+ ED+
Sbjct: 639 KDESEVDSTLRHLTPVDRLENEV---RVQNELDSRSQNHAVAEAAKGQLDLNCQPDREDV 695
Query: 361 QMDIPGLSIMDLADAANMPFDNYIKENGLSSLMCDRQASLGSCSHSQSDGENLRRLSDEA 420
Q LS+ L + AN+P + Y+K NGLSSL+ ++Q + S +Q+ ++ + +++
Sbjct: 696 QAWPNNLSMTSLLEEANLPLETYLKRNGLSSLISEQQTNSASNVQAQTTNDSEGKHNEDC 755
Query: 421 FLASIGWDRES 431
A + +RES
Sbjct: 756 GTALVIHERES 766
>Glyma14g38490.1
Length = 586
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 62/145 (42%), Positives = 82/145 (56%), Gaps = 28/145 (19%)
Query: 1 TFSRIDPGGKLVMGFRKATNNSLDTQDAQTSTIPNSAAITEASFSGIVTSENHGGR---- 56
TFSRIDPGGK VMG+R+A++ S+DTQ T + + + S+ ++ + N G
Sbjct: 289 TFSRIDPGGKFVMGYRRASD-SMDTQVEATFSGATANLHSGKSYPDLLQTRNGNGEPYLN 347
Query: 57 -----------------------VNGDALLQPTSEKKRTRNIGPKNKRLLMNSEDALELR 93
VN D L Q S ++T NI PK+KRLL ++EDA+ELR
Sbjct: 348 GCSEHLRFGTGTADCLQTENCEMVNNDLLQQTISVSEKTLNIAPKSKRLLTHNEDAVELR 407
Query: 94 LTWEEAQDLLRPPPSVKPSIVAIED 118
+TWEEAQDLL PPPS PS+ IED
Sbjct: 408 ITWEEAQDLLHPPPSTMPSVETIED 432
>Glyma02g40280.1
Length = 588
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 57/131 (43%), Positives = 71/131 (54%), Gaps = 37/131 (28%)
Query: 2 FSRIDPGGKLVMGFRKATNNSLDTQDAQTSTIPNSAAITEASFSGIVTSENHGG------ 55
FSRIDPGGK VMG R+A++ S+DTQ EA+FSG T+ H G
Sbjct: 318 FSRIDPGGKFVMGSRRASD-SIDTQ-------------VEATFSG-ATANLHSGNSYPDL 362
Query: 56 ----RVNGDALLQPTSEKKR----TRNIGPKNKRLLMNSEDALELRLTWEEAQDLLRPPP 107
+ NG+ L SE R T N + +E+ +ELR+TWEEAQDLL PPP
Sbjct: 363 LRTTKGNGEPYLNRYSEHLRFSTETANC--------LQTENDMELRVTWEEAQDLLHPPP 414
Query: 108 SVKPSIVAIED 118
VKPS+ IED
Sbjct: 415 CVKPSVETIED 425
>Glyma13g31970.1
Length = 840
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/126 (41%), Positives = 75/126 (59%), Gaps = 20/126 (15%)
Query: 1 TFSRIDPGGKLVMGFRKAT----------NNSLDTQDAQTSTIPNSAAITEASFSGIVTS 50
TFSR++P G+LVMGFRKA+ N +L T+ PNS + + S G +
Sbjct: 419 TFSRLEPEGRLVMGFRKASSVMPSDQFGENLNLYTESLHM-LYPNSWSKVDKS--GYIAK 475
Query: 51 ENHGGRVNGDALLQPTSEKKRTRNIGPKNKRLLMNSEDALELRLTWEEAQDLLRPPPSVK 110
E G + +L+ S K+++ + K+KRL + +ED +EL++TW+EAQ LLRPPPS
Sbjct: 476 EALGSK----SLI---SRKRKSNILSSKSKRLRIENEDLIELKITWQEAQGLLRPPPSHI 528
Query: 111 PSIVAI 116
PSIV I
Sbjct: 529 PSIVVI 534
>Glyma17g25650.1
Length = 192
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 59/141 (41%), Positives = 72/141 (51%), Gaps = 35/141 (24%)
Query: 1 TFSRIDPGGKLVMGFRKATNNS--------LDTQDAQTSTIPNSAAITEASFSGIVTSEN 52
TFSRIDP GKL+MGFRKATN++ L+T S NS + ++ I E+
Sbjct: 27 TFSRIDPEGKLIMGFRKATNSTAVESQKGCLETHLIVLSKKRNSTG-GDMNWQNIDMPES 85
Query: 53 HGGRVNGDALLQP---TSEKKRTRNIGPKNKRLLMNSEDALELRLTWEEAQDLLRPPPSV 109
D L P EKKRTR IG K +AQDLL PPPSV
Sbjct: 86 R----KRDELSLPLVMVPEKKRTRIIGSK-------------------KAQDLLCPPPSV 122
Query: 110 KPSIVAIEDHEFEEYDXATSF 130
KPSIV IEDH F+E++ +F
Sbjct: 123 KPSIVMIEDHVFQEHEFLNAF 143
>Glyma15g07350.1
Length = 832
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 76/150 (50%), Gaps = 43/150 (28%)
Query: 1 TFSRIDPGGKLVMGFRKATNNSLDTQDAQTSTI--------------------------- 33
TFSR++P G+LVMGFRKA++ Q + S +
Sbjct: 381 TFSRLEPEGRLVMGFRKASSAVPSDQFGENSNLYTETLNLLCAYFAFCRTMRPRLEMDFL 440
Query: 34 -------PNSAAITEASFSGIVTSENHGGRVNGDALLQPTSEKKRTRNIGPKNKRLLMNS 86
PNS + + S G + E G + +L+ S K+++ +G K+KRL + +
Sbjct: 441 HMVELADPNSWSKVDKS--GYIAKEALGSK----SLI---SRKRKSNILGSKSKRLRIEN 491
Query: 87 EDALELRLTWEEAQDLLRPPPSVKPSIVAI 116
ED +EL++TW+EAQ LLRPPPS PSIV I
Sbjct: 492 EDLIELKITWQEAQGLLRPPPSHIPSIVVI 521