Jatropha Genome Database

JcCA0003592.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0003592.10 + phase: 1 /partial
         (98 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma01g40810.1                                                       128   2e-30
Glyma11g04530.1                                                       126   5e-30
Glyma07g34690.1                                                       102   7e-23
Glyma20g02410.1                                                       102   9e-23
Glyma20g02400.1                                                       102   1e-22
Glyma11g04530.2                                                        63   8e-11
Glyma01g40810.2                                                        59   1e-09
Glyma07g34690.2                                                        47   5e-06

>Glyma01g40810.1 
          Length = 199

 Score =  128 bits (321), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 60/74 (81%), Positives = 67/74 (90%)

Query: 25  AVESVKATSDVNSPISGEIVEVNSKLSEAPGAINSSPYEEGWMIKVKPSNPSELGSLLDA 84
           AVESVKATSD+NSPISGEIVEVN KL+E PG +NSSPYE+GWMIKVKPS+PSEL SL+  
Sbjct: 126 AVESVKATSDINSPISGEIVEVNKKLTETPGLVNSSPYEDGWMIKVKPSDPSELDSLMGP 185

Query: 85  KAYTKFCEEEDAAH 98
           K YTKFCEEEDA+H
Sbjct: 186 KEYTKFCEEEDASH 199


>Glyma11g04530.1 
          Length = 165

 Score =  126 bits (317), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 60/74 (81%), Positives = 67/74 (90%)

Query: 25  AVESVKATSDVNSPISGEIVEVNSKLSEAPGAINSSPYEEGWMIKVKPSNPSELGSLLDA 84
           AVESVKATSD+NSPISGEIVEVN KL+E PG +NSSPYE+GWMIKVKPS+PSEL SL+  
Sbjct: 92  AVESVKATSDINSPISGEIVEVNKKLTETPGLVNSSPYEDGWMIKVKPSDPSELDSLMGP 151

Query: 85  KAYTKFCEEEDAAH 98
           K YTKFCEEEDA+H
Sbjct: 152 KEYTKFCEEEDASH 165


>Glyma07g34690.1 
          Length = 175

 Score =  102 bits (255), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 46/74 (62%), Positives = 62/74 (83%)

Query: 25  AVESVKATSDVNSPISGEIVEVNSKLSEAPGAINSSPYEEGWMIKVKPSNPSELGSLLDA 84
           AVESVKATSD+NSP+SG++VEVN  L+ +P  INSSPY++GW+IKV+ S+  EL +L+D+
Sbjct: 102 AVESVKATSDINSPVSGKVVEVNEALNSSPALINSSPYKDGWIIKVEISDNGELNNLMDS 161

Query: 85  KAYTKFCEEEDAAH 98
             Y+KFCEEED+ H
Sbjct: 162 DQYSKFCEEEDSKH 175


>Glyma20g02410.1 
          Length = 155

 Score =  102 bits (254), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 45/78 (57%), Positives = 64/78 (82%)

Query: 21  EELWAVESVKATSDVNSPISGEIVEVNSKLSEAPGAINSSPYEEGWMIKVKPSNPSELGS 80
           E   A ESVKATSD+NSP+SG++VEVN KL+ +P  +N+SPY++GW+IKV+ S+  EL +
Sbjct: 78  EGFGAAESVKATSDINSPVSGKVVEVNEKLTSSPALVNTSPYKDGWIIKVEMSDSGELNN 137

Query: 81  LLDAKAYTKFCEEEDAAH 98
           L+D++ Y+KFCEEED+ H
Sbjct: 138 LMDSEKYSKFCEEEDSNH 155


>Glyma20g02400.1 
          Length = 155

 Score =  102 bits (253), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 45/74 (60%), Positives = 63/74 (85%)

Query: 25  AVESVKATSDVNSPISGEIVEVNSKLSEAPGAINSSPYEEGWMIKVKPSNPSELGSLLDA 84
           AVESVKATSD+NSPISG++VEVN  L+ +P  +NSSPY++GW+IKV+ ++  EL +L+D+
Sbjct: 82  AVESVKATSDINSPISGKVVEVNEALNSSPALVNSSPYKDGWIIKVEINDSGELNNLMDS 141

Query: 85  KAYTKFCEEEDAAH 98
           + Y+KFCEEED+ H
Sbjct: 142 EQYSKFCEEEDSKH 155


>Glyma11g04530.2 
          Length = 150

 Score = 62.8 bits (151), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 32/39 (82%), Positives = 35/39 (89%), Gaps = 1/39 (2%)

Query: 25  AVESVKATSDVNSPISGEIVEVNSKLSEAPG-AINSSPY 62
           AVESVKATSD+NSPISGEIVEVN KL+E PG  INS+PY
Sbjct: 92  AVESVKATSDINSPISGEIVEVNKKLTETPGLVINSNPY 130


>Glyma01g40810.2 
          Length = 163

 Score = 58.9 bits (141), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 28/38 (73%), Positives = 33/38 (86%)

Query: 25  AVESVKATSDVNSPISGEIVEVNSKLSEAPGAINSSPY 62
           AVESVKATSD+NSPISGEIVEVN KL+E PG + +S +
Sbjct: 126 AVESVKATSDINSPISGEIVEVNKKLTETPGLVINSNF 163


>Glyma07g34690.2 
          Length = 138

 Score = 47.0 bits (110), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 21/33 (63%), Positives = 28/33 (84%)

Query: 25  AVESVKATSDVNSPISGEIVEVNSKLSEAPGAI 57
           AVESVKATSD+NSP+SG++VEVN  L+ +P  +
Sbjct: 102 AVESVKATSDINSPVSGKVVEVNEALNSSPALV 134