Jatropha Genome Database

JcCA0003212.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0003212.20 - phase: 0 
         (151 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma17g14370.1                                                       298   1e-81
Glyma05g03900.1                                                       298   1e-81
Glyma05g03880.1                                                       298   1e-81
Glyma05g03850.1                                                       298   1e-81
Glyma05g03900.2                                                       276   5e-75
Glyma05g03880.2                                                       276   5e-75
Glyma05g03850.2                                                       276   5e-75
Glyma01g33900.1                                                       230   4e-61
Glyma16g21880.1                                                       110   7e-25
Glyma14g17030.1                                                       110   7e-25
Glyma11g32380.1                                                        99   2e-21
Glyma10g26630.1                                                        98   3e-21
Glyma05g18180.1                                                        97   5e-21
Glyma06g29820.1                                                        86   2e-17
Glyma20g21370.1                                                        85   3e-17

>Glyma17g14370.1 
          Length = 151

 Score =  298 bits (763), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 145/151 (96%), Positives = 150/151 (99%)

Query: 1   MGRMHSRGKGISASALPYKRTPPSWLKISAQDVEDNICKFAKKGLTPSQIGVILRDSHGI 60
           MGRMHSRGKGIS+SALPYKRTPPSWLKIS+QDVE+NICKFAKKGLTPSQIGVILRDSHGI
Sbjct: 1   MGRMHSRGKGISSSALPYKRTPPSWLKISSQDVEENICKFAKKGLTPSQIGVILRDSHGI 60

Query: 61  AQVRSVTGNKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 120
           AQV SVTG+KILRILKAHGLAPEIPEDLYHLIKKAV+IRKHLERNRKDKDSKFRLILVES
Sbjct: 61  AQVNSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVES 120

Query: 121 RIHRLARYYKKTKKLPPVWKYESTTASTLVA 151
           RIHRLARYYKKTKKLPPVWKYESTTASTLVA
Sbjct: 121 RIHRLARYYKKTKKLPPVWKYESTTASTLVA 151


>Glyma05g03900.1 
          Length = 151

 Score =  298 bits (763), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 145/151 (96%), Positives = 150/151 (99%)

Query: 1   MGRMHSRGKGISASALPYKRTPPSWLKISAQDVEDNICKFAKKGLTPSQIGVILRDSHGI 60
           MGRMHSRGKGIS+SALPYKRTPPSWLKIS+QDVE+NICKFAKKGLTPSQIGVILRDSHGI
Sbjct: 1   MGRMHSRGKGISSSALPYKRTPPSWLKISSQDVEENICKFAKKGLTPSQIGVILRDSHGI 60

Query: 61  AQVRSVTGNKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 120
           AQV SVTG+KILRILKAHGLAPEIPEDLYHLIKKAV+IRKHLERNRKDKDSKFRLILVES
Sbjct: 61  AQVNSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVES 120

Query: 121 RIHRLARYYKKTKKLPPVWKYESTTASTLVA 151
           RIHRLARYYKKTKKLPPVWKYESTTASTLVA
Sbjct: 121 RIHRLARYYKKTKKLPPVWKYESTTASTLVA 151


>Glyma05g03880.1 
          Length = 151

 Score =  298 bits (763), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 145/151 (96%), Positives = 150/151 (99%)

Query: 1   MGRMHSRGKGISASALPYKRTPPSWLKISAQDVEDNICKFAKKGLTPSQIGVILRDSHGI 60
           MGRMHSRGKGIS+SALPYKRTPPSWLKIS+QDVE+NICKFAKKGLTPSQIGVILRDSHGI
Sbjct: 1   MGRMHSRGKGISSSALPYKRTPPSWLKISSQDVEENICKFAKKGLTPSQIGVILRDSHGI 60

Query: 61  AQVRSVTGNKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 120
           AQV SVTG+KILRILKAHGLAPEIPEDLYHLIKKAV+IRKHLERNRKDKDSKFRLILVES
Sbjct: 61  AQVNSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVES 120

Query: 121 RIHRLARYYKKTKKLPPVWKYESTTASTLVA 151
           RIHRLARYYKKTKKLPPVWKYESTTASTLVA
Sbjct: 121 RIHRLARYYKKTKKLPPVWKYESTTASTLVA 151


>Glyma05g03850.1 
          Length = 151

 Score =  298 bits (763), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 145/151 (96%), Positives = 150/151 (99%)

Query: 1   MGRMHSRGKGISASALPYKRTPPSWLKISAQDVEDNICKFAKKGLTPSQIGVILRDSHGI 60
           MGRMHSRGKGIS+SALPYKRTPPSWLKIS+QDVE+NICKFAKKGLTPSQIGVILRDSHGI
Sbjct: 1   MGRMHSRGKGISSSALPYKRTPPSWLKISSQDVEENICKFAKKGLTPSQIGVILRDSHGI 60

Query: 61  AQVRSVTGNKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 120
           AQV SVTG+KILRILKAHGLAPEIPEDLYHLIKKAV+IRKHLERNRKDKDSKFRLILVES
Sbjct: 61  AQVNSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVES 120

Query: 121 RIHRLARYYKKTKKLPPVWKYESTTASTLVA 151
           RIHRLARYYKKTKKLPPVWKYESTTASTLVA
Sbjct: 121 RIHRLARYYKKTKKLPPVWKYESTTASTLVA 151


>Glyma05g03900.2 
          Length = 140

 Score =  276 bits (706), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 134/140 (95%), Positives = 139/140 (99%)

Query: 1   MGRMHSRGKGISASALPYKRTPPSWLKISAQDVEDNICKFAKKGLTPSQIGVILRDSHGI 60
           MGRMHSRGKGIS+SALPYKRTPPSWLKIS+QDVE+NICKFAKKGLTPSQIGVILRDSHGI
Sbjct: 1   MGRMHSRGKGISSSALPYKRTPPSWLKISSQDVEENICKFAKKGLTPSQIGVILRDSHGI 60

Query: 61  AQVRSVTGNKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 120
           AQV SVTG+KILRILKAHGLAPEIPEDLYHLIKKAV+IRKHLERNRKDKDSKFRLILVES
Sbjct: 61  AQVNSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVES 120

Query: 121 RIHRLARYYKKTKKLPPVWK 140
           RIHRLARYYKKTKKLPPVWK
Sbjct: 121 RIHRLARYYKKTKKLPPVWK 140


>Glyma05g03880.2 
          Length = 140

 Score =  276 bits (706), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 134/140 (95%), Positives = 139/140 (99%)

Query: 1   MGRMHSRGKGISASALPYKRTPPSWLKISAQDVEDNICKFAKKGLTPSQIGVILRDSHGI 60
           MGRMHSRGKGIS+SALPYKRTPPSWLKIS+QDVE+NICKFAKKGLTPSQIGVILRDSHGI
Sbjct: 1   MGRMHSRGKGISSSALPYKRTPPSWLKISSQDVEENICKFAKKGLTPSQIGVILRDSHGI 60

Query: 61  AQVRSVTGNKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 120
           AQV SVTG+KILRILKAHGLAPEIPEDLYHLIKKAV+IRKHLERNRKDKDSKFRLILVES
Sbjct: 61  AQVNSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVES 120

Query: 121 RIHRLARYYKKTKKLPPVWK 140
           RIHRLARYYKKTKKLPPVWK
Sbjct: 121 RIHRLARYYKKTKKLPPVWK 140


>Glyma05g03850.2 
          Length = 140

 Score =  276 bits (706), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 134/140 (95%), Positives = 139/140 (99%)

Query: 1   MGRMHSRGKGISASALPYKRTPPSWLKISAQDVEDNICKFAKKGLTPSQIGVILRDSHGI 60
           MGRMHSRGKGIS+SALPYKRTPPSWLKIS+QDVE+NICKFAKKGLTPSQIGVILRDSHGI
Sbjct: 1   MGRMHSRGKGISSSALPYKRTPPSWLKISSQDVEENICKFAKKGLTPSQIGVILRDSHGI 60

Query: 61  AQVRSVTGNKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 120
           AQV SVTG+KILRILKAHGLAPEIPEDLYHLIKKAV+IRKHLERNRKDKDSKFRLILVES
Sbjct: 61  AQVNSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVES 120

Query: 121 RIHRLARYYKKTKKLPPVWK 140
           RIHRLARYYKKTKKLPPVWK
Sbjct: 121 RIHRLARYYKKTKKLPPVWK 140


>Glyma01g33900.1 
          Length = 151

 Score =  230 bits (587), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 116/137 (84%), Positives = 124/137 (90%), Gaps = 2/137 (1%)

Query: 11  ISASALPYKRTPPSWLKISAQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVRSVTGNK 70
           IS S LPYKRT PSWLKIS+ D  +NICKFAKKGLTPS IGVIL DSHGIAQV+SVTG+K
Sbjct: 11  ISNSTLPYKRTSPSWLKISSHD--ENICKFAKKGLTPSHIGVILHDSHGIAQVKSVTGSK 68

Query: 71  ILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYK 130
           ILRILKAH LAPEI +DLYHLIKK V IRKHLERN+KDKDSKF+LILVESRIHRLA YYK
Sbjct: 69  ILRILKAHRLAPEISKDLYHLIKKVVYIRKHLERNKKDKDSKFKLILVESRIHRLAHYYK 128

Query: 131 KTKKLPPVWKYESTTAS 147
           KTKKLPPVWKYESTTA+
Sbjct: 129 KTKKLPPVWKYESTTAN 145


>Glyma16g21880.1 
          Length = 97

 Score =  110 bits (274), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 60/96 (62%), Positives = 71/96 (73%), Gaps = 8/96 (8%)

Query: 45  LTPS-QIGVILRDSHGIAQVRSVTGNKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLE 103
           L PS Q+ +IL  SH  A ++       +  L+     P+IPEDLYHLIKKAV+IRKHLE
Sbjct: 8   LFPSCQVSLILEHSHFFANIK-------MNHLQISMDKPKIPEDLYHLIKKAVSIRKHLE 60

Query: 104 RNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVW 139
           RN+KDKDSKFRLILV+SRI+RLARYY KTKKL  VW
Sbjct: 61  RNKKDKDSKFRLILVDSRIYRLARYYNKTKKLLLVW 96


>Glyma14g17030.1 
          Length = 61

 Score =  110 bits (274), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 52/60 (86%), Positives = 56/60 (93%)

Query: 81  APEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK 140
            PEIPE+LYHLIKK V+IR HLERN+KDKDSKFRLILV+SRIHRLARYY KTKKLPPVWK
Sbjct: 2   VPEIPENLYHLIKKVVSIRNHLERNKKDKDSKFRLILVDSRIHRLARYYSKTKKLPPVWK 61


>Glyma11g32380.1 
          Length = 82

 Score = 99.0 bits (245), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 53/89 (59%), Positives = 62/89 (69%), Gaps = 12/89 (13%)

Query: 48  SQIGVILRDSHGIAQVRSVTGNKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRK 107
            Q+  IL  SH  A ++             H   PEIPEDLYHLIKKAV+IRKHLERN+K
Sbjct: 1   CQVSSILEHSHFFANIKM-----------THLPIPEIPEDLYHLIKKAVSIRKHLERNKK 49

Query: 108 DKDSKFRLILVESRIHRLARYYKKTKKLP 136
           DKDSKF+LIL+ SRI+RLARYY KTK+ P
Sbjct: 50  DKDSKFKLILINSRIYRLARYY-KTKEAP 77


>Glyma10g26630.1 
          Length = 92

 Score = 98.2 bits (243), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 46/60 (76%), Positives = 54/60 (90%)

Query: 81  APEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK 140
            PE P+D+YHL KKAV+IRKHLERN+KDKDSKFRLILV++RIHRLARYYKKTKKL   ++
Sbjct: 24  VPEFPKDMYHLNKKAVSIRKHLERNKKDKDSKFRLILVDNRIHRLARYYKKTKKLSSKFQ 83


>Glyma05g18180.1 
          Length = 55

 Score = 97.4 bits (241), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 46/54 (85%), Positives = 51/54 (94%)

Query: 83  EIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLP 136
           EIPEDLYHLIK AV+IR HLERN+K+KDSKFRLILV+SRIHRLARYY KTK+LP
Sbjct: 1   EIPEDLYHLIKNAVSIRNHLERNKKEKDSKFRLILVDSRIHRLARYYNKTKELP 54


>Glyma06g29820.1 
          Length = 64

 Score = 85.5 bits (210), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 44/75 (58%), Positives = 51/75 (68%), Gaps = 12/75 (16%)

Query: 4  MHSRGKGISASALPYKRTPPSWLKISAQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQV 63
          ++   KGIS+SA PYK+ PPSWLKIS QD E+NI KF KK            D HGIAQV
Sbjct: 1  INDSSKGISSSAFPYKKRPPSWLKISLQDEEENIYKFVKK------------DYHGIAQV 48

Query: 64 RSVTGNKILRILKAH 78
          +S+T NKIL ILKAH
Sbjct: 49 KSITSNKILHILKAH 63


>Glyma20g21370.1 
          Length = 58

 Score = 85.1 bits (209), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 45/75 (60%), Positives = 52/75 (69%), Gaps = 18/75 (24%)

Query: 4  MHSRGKGISASALPYKRTPPSWLKISAQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQV 63
          ++   KGIS+SALPYK+TP SWLKIS+QDVE+NICKFAKKGLT                 
Sbjct: 1  INDSSKGISSSALPYKKTPLSWLKISSQDVEENICKFAKKGLTL---------------- 44

Query: 64 RSVTGNKILRILKAH 78
            VTG+KILRILKAH
Sbjct: 45 --VTGSKILRILKAH 57