Jatropha Genome Database

JcCA0003212.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0003212.10 - phase: 0 
         (619 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma17g37310.1                                                       396   e-110
Glyma06g42210.1                                                       315   7e-86
Glyma17g29450.1                                                       221   1e-57
Glyma17g37390.1                                                       218   1e-56
Glyma01g34390.1                                                       152   1e-36
Glyma03g02710.1                                                       143   5e-34
Glyma18g22850.1                                                       100   7e-21
Glyma17g29470.1                                                        93   1e-18
Glyma16g24280.1                                                        82   2e-15

>Glyma17g37310.1 
          Length = 313

 Score =  396 bits (1017), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 186/232 (80%), Positives = 210/232 (90%), Gaps = 2/232 (0%)

Query: 64  GRGLEMKNDXXXXXXXXXXXX--KDKIDALGRLLTRVLRHMASELSLNMRSDGYVKVQDL 121
           G+  +M+ND              KDKID+LGRLLTR+LRHMASEL+LNMRSDGYVKV DL
Sbjct: 82  GKAFDMRNDRERTRGRGGGSGSGKDKIDSLGRLLTRILRHMASELNLNMRSDGYVKVNDL 141

Query: 122 LKLNMKTFADIPLRAHTVDDIKEAVRKDNKQRFSLLEENGELLIRANQGHTIKAVESESL 181
           LKLN+KTFA+IPL+ HT+DDI+EAVRKDNKQRFSLLEENGELLIRANQGHT+KAVE+ESL
Sbjct: 142 LKLNLKTFANIPLKLHTIDDIREAVRKDNKQRFSLLEENGELLIRANQGHTVKAVETESL 201

Query: 182 LKPILSADEVPVCVHGTYKKNVESILNSGLKRMQRLHVHFSCGLPTDGEVISGMRRDVNV 241
           LKPILSA+E PVCVHGTY+KN+ESIL SGLKRM+RLHVHFSCGLPTDGEVISGMR+DVNV
Sbjct: 202 LKPILSAEEFPVCVHGTYRKNLESILGSGLKRMKRLHVHFSCGLPTDGEVISGMRQDVNV 261

Query: 242 LVYLNVKKALEEGMKLYISDNRVILTEGFDGVVPVKYFEKIESWPERRPIPF 293
           L++L+V+KALEEGMKLYISDN+VILTEGFDGVVP KYFEKIESWP R+PIPF
Sbjct: 262 LIFLDVRKALEEGMKLYISDNKVILTEGFDGVVPAKYFEKIESWPSRQPIPF 313


>Glyma06g42210.1 
          Length = 252

 Score =  315 bits (808), Expect = 7e-86,   Method: Compositional matrix adjust.
 Identities = 149/215 (69%), Positives = 175/215 (81%), Gaps = 1/215 (0%)

Query: 404 YSKTQRSMAILNIFINFIQTFLNTRLNGLAQH-PQHKNHYIFTDSDIAVVDDLKHIFHKF 462
           YS+ +  +  +  +I  +     TRL  L+Q  P++  HYIFTDSDIAVVDDL  IF   
Sbjct: 32  YSRDKLMLQRIRSYIVRLHCIHKTRLQNLSQKKPKNITHYIFTDSDIAVVDDLGQIFRDH 91

Query: 463 PNFHLALTFRNNKDQPLNSGFIAVRGTPESILRAKIFLEEVLEVYTSKYMNASRMLGDQL 522
           PNFH+ALTFRNNK QPLNSGFIAVRGTPE+ILRAK+FL+EVL+VY++KY NASRMLGDQL
Sbjct: 92  PNFHVALTFRNNKAQPLNSGFIAVRGTPEAILRAKLFLQEVLKVYSTKYRNASRMLGDQL 151

Query: 523 ALAWIIKSHPSFDLRRFRKAQAFVEEVGGASVLFLPCATYNWTPPEGAGQFRGMPLDVKV 582
           ALAW++KS P FD  RF KA AF E++GG SV+FLPC+ YNWTPPEGAGQF GMPLD KV
Sbjct: 152 ALAWVVKSKPHFDASRFGKALAFSEDIGGTSVVFLPCSLYNWTPPEGAGQFHGMPLDAKV 211

Query: 583 VHFKGSRKRLMLESWNFFSSTSDISDMLCLILTSG 617
           VHFKGSRKRLMLESWNF+SS+ ++SDMLCLIL SG
Sbjct: 212 VHFKGSRKRLMLESWNFYSSSLEVSDMLCLILGSG 246


>Glyma17g29450.1 
          Length = 215

 Score =  221 bits (564), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 108/145 (74%), Positives = 118/145 (81%), Gaps = 19/145 (13%)

Query: 149 DNKQRFSLLEENGELLIRANQGHTIKAVESESLLKPILSADEVPVCVHGTYKKNVESILN 208
           DNKQRFSLLEENGELLIRANQGHT+K VE+ESLLKPILSA E PVC+HGTY+KN+ESIL 
Sbjct: 90  DNKQRFSLLEENGELLIRANQGHTVKVVETESLLKPILSAKEFPVCLHGTYRKNLESILG 149

Query: 209 SGLKRMQRLHVHFSCGLPTDGEVISGMRRDVNVLVYLNVKKALEEGMKLYISDNRVILTE 268
           SGLKRM+RLHVHFSCGLPTDGEVIS                   E +KLYISDN+VILTE
Sbjct: 150 SGLKRMKRLHVHFSCGLPTDGEVIS-------------------ESIKLYISDNKVILTE 190

Query: 269 GFDGVVPVKYFEKIESWPERRPIPF 293
           GFDGVVP KYFE+IESWP R+PI F
Sbjct: 191 GFDGVVPPKYFERIESWPSRQPISF 215


>Glyma17g37390.1 
          Length = 119

 Score =  218 bits (556), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 101/119 (84%), Positives = 114/119 (95%)

Query: 175 AVESESLLKPILSADEVPVCVHGTYKKNVESILNSGLKRMQRLHVHFSCGLPTDGEVISG 234
           AVE+ESLLKPILSA+E PVCVHGTY+KN+ESIL SGLKRM+RLHVHFSCGLPTDGEVISG
Sbjct: 1   AVETESLLKPILSAEEFPVCVHGTYRKNLESILGSGLKRMKRLHVHFSCGLPTDGEVISG 60

Query: 235 MRRDVNVLVYLNVKKALEEGMKLYISDNRVILTEGFDGVVPVKYFEKIESWPERRPIPF 293
           MR+DVNVL++L+V+KALEE MKLYISDN+VILTEGFDGVVP KYFEKIESWP ++PIPF
Sbjct: 61  MRQDVNVLIFLDVRKALEECMKLYISDNKVILTEGFDGVVPPKYFEKIESWPGKQPIPF 119


>Glyma01g34390.1 
          Length = 131

 Score =  152 bits (383), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 76/109 (69%), Positives = 87/109 (79%), Gaps = 8/109 (7%)

Query: 175 AVESESLLKPILSADEVPVCVHGTYKKNVESILNSGLKRMQRLHVHFSCGLPTDGEVISG 234
           AVE+ESLLKPILSA+E PVCVHGTY+KN+ SIL SGLK M+RLHVHFSCGLPTDGEVISG
Sbjct: 21  AVETESLLKPILSAEEFPVCVHGTYRKNLASILGSGLKCMKRLHVHFSCGLPTDGEVISG 80

Query: 235 MRRDVNVLVYLNVKKALE--------EGMKLYISDNRVILTEGFDGVVP 275
           MR+D NVL++L+V+KALE             YI   +VILTEGF GVVP
Sbjct: 81  MRQDANVLIFLDVRKALEVKSTTNKTVDCYFYIFFPKVILTEGFVGVVP 129


>Glyma03g02710.1 
          Length = 83

 Score =  143 bits (361), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 66/84 (78%), Positives = 76/84 (90%), Gaps = 2/84 (2%)

Query: 193 VCVHGTYKKNVESILNSGLKRMQRLHVHFSCGLPTDGEVISGMRRDVNVLVYLNVKKALE 252
           VCVHGTY+KN+ESIL SGLK M+RLHVHF CGLP DGEVISG   D+NVL++L+V+KALE
Sbjct: 1   VCVHGTYRKNLESILGSGLKCMKRLHVHFPCGLPIDGEVISG--NDINVLIFLDVRKALE 58

Query: 253 EGMKLYISDNRVILTEGFDGVVPV 276
           EGMKLYISDN+VILTEGF GVVP+
Sbjct: 59  EGMKLYISDNKVILTEGFKGVVPL 82


>Glyma18g22850.1 
          Length = 61

 Score =  100 bits (248), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 42/60 (70%), Positives = 49/60 (81%)

Query: 522 LALAWIIKSHPSFDLRRFRKAQAFVEEVGGASVLFLPCATYNWTPPEGAGQFRGMPLDVK 581
           LAL  I+KS P FD  RF KA AF +++GG+S+LFLPC+ YNWTPPEGAGQF GMPLDVK
Sbjct: 1   LALPLIVKSKPHFDASRFAKAPAFSKDIGGSSILFLPCSLYNWTPPEGAGQFHGMPLDVK 60


>Glyma17g29470.1 
          Length = 93

 Score = 92.8 bits (229), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 43/64 (67%), Positives = 54/64 (84%)

Query: 221 FSCGLPTDGEVISGMRRDVNVLVYLNVKKALEEGMKLYISDNRVILTEGFDGVVPVKYFE 280
           F+   P    ++ GMR+DVNVL++L+V+K L+EGMKLYISDN+VILTEGFDGVVP KYFE
Sbjct: 30  FASLYPFATYLLEGMRQDVNVLIFLDVRKTLKEGMKLYISDNKVILTEGFDGVVPPKYFE 89

Query: 281 KIES 284
           KI+S
Sbjct: 90  KIKS 93


>Glyma16g24280.1 
          Length = 119

 Score = 81.6 bits (200), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 38/70 (54%), Positives = 47/70 (67%), Gaps = 2/70 (2%)

Query: 524 LAWIIKSHPSFDLRRFRKAQAFVEEVGGASVLFLPCATYNWTPPEGAGQFRGMPLDVKVV 583
             W +K+  SFD  RF K  AF E++GG+SVLFLPC+ YNWT PEGA  F GMPLDVK+ 
Sbjct: 41  FGWDVKT--SFDASRFAKTPAFFEDIGGSSVLFLPCSLYNWTLPEGACLFHGMPLDVKLE 98

Query: 584 HFKGSRKRLM 593
             K  +  L+
Sbjct: 99  FGKSYKDDLV 108