Jatropha Genome Database

JcCA0002951.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0002951.10 + phase: 0 
         (249 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g21290.2                                                       357   5e-99
Glyma08g21290.1                                                       354   4e-98
Glyma07g01650.1                                                        82   5e-16

>Glyma08g21290.2 
          Length = 249

 Score =  357 bits (917), Expect = 5e-99,   Method: Compositional matrix adjust.
 Identities = 170/228 (74%), Positives = 186/228 (81%), Gaps = 1/228 (0%)

Query: 23  TDMTGICFRDQLWLNTYPLDRNLIFDYFALSPFYDWTCNNEQLRLQSIHPLDLSHLSKMT 82
           TDMTGICFRDQLWLN++PLDRNL+FDYFALSPFYDWTCNNEQLR++S+HPLD+S LSKMT
Sbjct: 22  TDMTGICFRDQLWLNSFPLDRNLVFDYFALSPFYDWTCNNEQLRMRSVHPLDISQLSKMT 81

Query: 83  GMEYMLSEVMEPNLFVIRKQKRDSPEKVTPMLTYYILDGSIYQAPQLCNVFAARIGRALY 142
           G EYMLSEVMEP+LFVIRKQKRDSP+KVTPML YY+LDGSIYQAPQLCNVFAARIGRALY
Sbjct: 82  GTEYMLSEVMEPHLFVIRKQKRDSPDKVTPMLAYYVLDGSIYQAPQLCNVFAARIGRALY 141

Query: 143 YISKAFTNAASKLEKIGYVD-EGEGVTSESKVGKELIDFKEVKRIDSILASLQRKLXXXX 201
           YI KAFT AASKLEKIGY D E E    ESK  KE ID KEVKR+D ILASLQRKL    
Sbjct: 142 YIQKAFTTAASKLEKIGYADSENETALLESKTAKETIDIKEVKRVDHILASLQRKLPPAP 201

Query: 202 XXXXXXXXXXXXXSTDTEKGAESQQGTESQPLAVDPIIDQGPAKRMKF 249
                        + +TEKG E+Q+  E+Q    DPIIDQGPAKRMKF
Sbjct: 202 PPPPFPEGYVPPPTAETEKGTETQEAAETQAPTADPIIDQGPAKRMKF 249


>Glyma08g21290.1 
          Length = 252

 Score =  354 bits (909), Expect = 4e-98,   Method: Compositional matrix adjust.
 Identities = 169/231 (73%), Positives = 185/231 (80%), Gaps = 4/231 (1%)

Query: 23  TDMTGICFRDQLWLNTYPLDRNLIFDYFALSPFYDWTCNNEQLRLQSIHPLDLSHLSKMT 82
           TDMTGICFRDQLWLN++PLDRNL+FDYFALSPFYDWTCNNEQLR++S+HPLD+S LSKMT
Sbjct: 22  TDMTGICFRDQLWLNSFPLDRNLVFDYFALSPFYDWTCNNEQLRMRSVHPLDISQLSKMT 81

Query: 83  GMEYMLSEVMEPNLFVIRKQKRDSPEKVTPMLTYYILDGSIYQAPQLCNVFAARIGRALY 142
           G EYMLSEVMEP+LFVIRKQKRDSP+KVTPML YY+LDGSIYQAPQLCNVFAARIGRALY
Sbjct: 82  GTEYMLSEVMEPHLFVIRKQKRDSPDKVTPMLAYYVLDGSIYQAPQLCNVFAARIGRALY 141

Query: 143 YISKAFTNAASKLEKIGYV----DEGEGVTSESKVGKELIDFKEVKRIDSILASLQRKLX 198
           YI KAFT AASKLEKIGY      E E    ESK  KE ID KEVKR+D ILASLQRKL 
Sbjct: 142 YIQKAFTTAASKLEKIGYAGSADSENETALLESKTAKETIDIKEVKRVDHILASLQRKLP 201

Query: 199 XXXXXXXXXXXXXXXXSTDTEKGAESQQGTESQPLAVDPIIDQGPAKRMKF 249
                           + +TEKG E+Q+  E+Q    DPIIDQGPAKRMKF
Sbjct: 202 PAPPPPPFPEGYVPPPTAETEKGTETQEAAETQAPTADPIIDQGPAKRMKF 252


>Glyma07g01650.1 
          Length = 92

 Score = 82.0 bits (201), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 45/92 (48%), Positives = 52/92 (56%), Gaps = 1/92 (1%)

Query: 159 GYVDEGEGVTS-ESKVGKELIDFKEVKRIDSILASLQRKLXXXXXXXXXXXXXXXXXSTD 217
           G VD   G    ESK  KE ID KE KR+D IL SLQR+L                 + +
Sbjct: 1   GSVDSENGTALLESKTAKETIDIKEAKRVDHILTSLQRRLPPAPPPPPFPEGYVSPLTAE 60

Query: 218 TEKGAESQQGTESQPLAVDPIIDQGPAKRMKF 249
           TEKG E+Q+  E+Q    DPIIDQGPAKRMKF
Sbjct: 61  TEKGTETQEAAETQAPTADPIIDQGPAKRMKF 92