Jatropha Genome Database

JcCA0000872.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0000872.20 + phase: 0 
         (529 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma16g15800.1                                                       682   0.0  
Glyma01g01340.1                                                       629   e-180
Glyma09g34440.1                                                       619   e-177
Glyma08g34720.1                                                       520   e-147

>Glyma16g15800.1 
          Length = 501

 Score =  682 bits (1760), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 337/423 (79%), Positives = 376/423 (88%)

Query: 107 SQSVSGILHLLVSLGIILAMDKLLKKAFVAAAIKFPSALFGMFCIFSVLLILDSTIPAAA 166
           +Q+V G+LHL VSLG+ILA+DK LK+AFVAAAIKFPSALFGMFCIFSVL+ILDST+PAAA
Sbjct: 79  TQTVFGVLHLAVSLGLILAVDKFLKQAFVAAAIKFPSALFGMFCIFSVLIILDSTVPAAA 138

Query: 167 TSLVNFFEPALLFIQRWXXXXXXXXXXXXXXXXRDIPAASGLKICYIVAGGWLASLCVAG 226
           T+ V+FFEPA +FIQRW                +DIPAASG KI  I+ GGWLA+LCVAG
Sbjct: 139 TAFVSFFEPAFMFIQRWLPLFYVPSLVVLPLAVKDIPAASGAKIGLILVGGWLATLCVAG 198

Query: 227 FTAITVRKIVKTEMTDAEPMKKPSPFSPLEVWAWSGIFLVSFVAALWFPTALGTSARTCL 286
           +TAI VRK VKTE+ DAEPM KP+PFS LEVW W+ + L+SFV+AL++PTALGTSARTCL
Sbjct: 199 YTAIAVRKAVKTELVDAEPMGKPAPFSSLEVWTWTAVLLISFVSALFYPTALGTSARTCL 258

Query: 287 PFLLASTVLGYMVGSGLPSSVKKAFHPIICCTLSADLAALAFGYLSHSGLNPVLGYYLTK 346
           PFLLA+TVLGYMVGSGLPS+VKK FHPIICC LSADL A AFGY S SGL PVLGYYLTK
Sbjct: 259 PFLLAATVLGYMVGSGLPSNVKKVFHPIICCALSADLTAFAFGYFSKSGLEPVLGYYLTK 318

Query: 347 VSADPGAGDVLMGFLGSVILSFAFSMFKQRKLVKRHAAEIFTSVIFSTIFSLYSTALIGR 406
            S++PGAGD+LMGFLGSVILSF+FSMFKQRKLVKRHAAEIFTSVI ST+FSLYSTAL+GR
Sbjct: 319 ASSNPGAGDILMGFLGSVILSFSFSMFKQRKLVKRHAAEIFTSVIISTVFSLYSTALVGR 378

Query: 407 LVGLEPTLTVSILPRCITVALALSIVSLFEGANSSLTAAVVVVTGLIGANFVQFALDKLK 466
           LV LEP+LTVSILPRCITVALALSIVSLF+GANSSLTAAVVV+TGL+GANFVQ  LDKL 
Sbjct: 379 LVQLEPSLTVSILPRCITVALALSIVSLFDGANSSLTAAVVVLTGLVGANFVQATLDKLS 438

Query: 467 FRDPIARGIATASSAHGLGTAALSAKEPEALPFCAIAYALTGIFGSLICSVPAVRQSLLA 526
           FRDPIARGIATASSAHGLGTAALSAKEPEALPFCAIAYAL GIFGS++CS+PAVRQSLLA
Sbjct: 439 FRDPIARGIATASSAHGLGTAALSAKEPEALPFCAIAYALNGIFGSILCSIPAVRQSLLA 498

Query: 527 IIG 529
           I+G
Sbjct: 499 IVG 501


>Glyma01g01340.1 
          Length = 456

 Score =  629 bits (1621), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 320/421 (76%), Positives = 364/421 (86%)

Query: 109 SVSGILHLLVSLGIILAMDKLLKKAFVAAAIKFPSALFGMFCIFSVLLILDSTIPAAATS 168
            V G+LH +VSLG+ILA+D LLKKAFVAA+I+FPSALFGMFCIFSVL+ILD  IP+AA +
Sbjct: 36  QVFGVLHWVVSLGLILAIDFLLKKAFVAASIEFPSALFGMFCIFSVLIILDCAIPSAAVA 95

Query: 169 LVNFFEPALLFIQRWXXXXXXXXXXXXXXXXRDIPAASGLKICYIVAGGWLASLCVAGFT 228
           L+ FFEP ++FIQRW                +DIP +S +KIC+IV GGWLA+LCV G T
Sbjct: 96  LMKFFEPGIMFIQRWLPLFYVPYLVVLPLSLKDIPPSSAIKICFIVVGGWLATLCVTGMT 155

Query: 229 AITVRKIVKTEMTDAEPMKKPSPFSPLEVWAWSGIFLVSFVAALWFPTALGTSARTCLPF 288
           AI VRK VKTE+ DAEPM+KPSPFS +E+WAW+GIFL+SFVA+L +PTALGT ART LPF
Sbjct: 156 AIGVRKAVKTELIDAEPMEKPSPFSSIELWAWTGIFLISFVASLVYPTALGTRARTYLPF 215

Query: 289 LLASTVLGYMVGSGLPSSVKKAFHPIICCTLSADLAALAFGYLSHSGLNPVLGYYLTKVS 348
           LLASTVLGYM+GSGLPSSVKK  HPII C  SA++ A+ FG+LS SGL+PVLGYYLT  S
Sbjct: 216 LLASTVLGYMIGSGLPSSVKKVLHPIIFCAASAEVTAVVFGFLSKSGLDPVLGYYLTNSS 275

Query: 349 ADPGAGDVLMGFLGSVILSFAFSMFKQRKLVKRHAAEIFTSVIFSTIFSLYSTALIGRLV 408
           +DPGAGD+LMGFLGSVILSFAFSMFKQRKLVKRHAAEIFTSVI ST+FSLYSTAL+GRLV
Sbjct: 276 SDPGAGDILMGFLGSVILSFAFSMFKQRKLVKRHAAEIFTSVIISTLFSLYSTALVGRLV 335

Query: 409 GLEPTLTVSILPRCITVALALSIVSLFEGANSSLTAAVVVVTGLIGANFVQFALDKLKFR 468
            LEP+LTVSILPRCITVALALSIVS FEGAN+S+TAA VVVTGL+GANFVQ  LDKL+ R
Sbjct: 336 ALEPSLTVSILPRCITVALALSIVSFFEGANASVTAAAVVVTGLVGANFVQATLDKLRLR 395

Query: 469 DPIARGIATASSAHGLGTAALSAKEPEALPFCAIAYALTGIFGSLICSVPAVRQSLLAII 528
           DPIARGIATASS HGLGTAALSAKEPEALPFCAIAY LTGIFGS++CS+P VRQSLLA+I
Sbjct: 396 DPIARGIATASSCHGLGTAALSAKEPEALPFCAIAYGLTGIFGSILCSIPVVRQSLLAVI 455

Query: 529 G 529
           G
Sbjct: 456 G 456


>Glyma09g34440.1 
          Length = 438

 Score =  619 bits (1596), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 317/417 (76%), Positives = 360/417 (86%)

Query: 110 VSGILHLLVSLGIILAMDKLLKKAFVAAAIKFPSALFGMFCIFSVLLILDSTIPAAATSL 169
           V G+LH +VSLG+ILA+D LLKKAFVAA+I+FPSALFGMFCIFSVL+IL+  IP+AA +L
Sbjct: 22  VYGVLHWVVSLGLILAIDFLLKKAFVAASIEFPSALFGMFCIFSVLIILNYAIPSAAMAL 81

Query: 170 VNFFEPALLFIQRWXXXXXXXXXXXXXXXXRDIPAASGLKICYIVAGGWLASLCVAGFTA 229
           + FFEP ++FIQRW                +DI  +S +KIC IV GGWLA+LCV G TA
Sbjct: 82  MKFFEPGIMFIQRWLPLFYVPYLVVLPLSLKDISPSSAIKICLIVVGGWLATLCVTGLTA 141

Query: 230 ITVRKIVKTEMTDAEPMKKPSPFSPLEVWAWSGIFLVSFVAALWFPTALGTSARTCLPFL 289
           I VRK VKTE+ DAEPM+KPSPFS  E+WAW+GIFL+SFVA+L +PTALGT ART LPFL
Sbjct: 142 IGVRKAVKTELIDAEPMEKPSPFSSSELWAWTGIFLISFVASLVYPTALGTRARTYLPFL 201

Query: 290 LASTVLGYMVGSGLPSSVKKAFHPIICCTLSADLAALAFGYLSHSGLNPVLGYYLTKVSA 349
           LASTVLGYM+GS LPSSVKK  HPIICC  SA+L A+ FG+LS SGL+PVLGYYLT  S+
Sbjct: 202 LASTVLGYMIGSRLPSSVKKVLHPIICCAASAELTAVVFGFLSKSGLDPVLGYYLTNSSS 261

Query: 350 DPGAGDVLMGFLGSVILSFAFSMFKQRKLVKRHAAEIFTSVIFSTIFSLYSTALIGRLVG 409
           DPGAGD+LMGFLGSVILSFAFSMFKQRKLV+RHAAEIFTSVI S++FSLYSTAL+GRLV 
Sbjct: 262 DPGAGDILMGFLGSVILSFAFSMFKQRKLVQRHAAEIFTSVIISSLFSLYSTALVGRLVA 321

Query: 410 LEPTLTVSILPRCITVALALSIVSLFEGANSSLTAAVVVVTGLIGANFVQFALDKLKFRD 469
           LEP+LTVSILPRCITVALALSIVS FEGAN+S+TAA VVVTGL+GANFVQ  LDKL+ RD
Sbjct: 322 LEPSLTVSILPRCITVALALSIVSFFEGANASVTAAAVVVTGLVGANFVQATLDKLRLRD 381

Query: 470 PIARGIATASSAHGLGTAALSAKEPEALPFCAIAYALTGIFGSLICSVPAVRQSLLA 526
           PIARGIATASS HGLGTAALSAKEPEALPFCAIAYALTGIFGS++CS+PAVRQSLLA
Sbjct: 382 PIARGIATASSCHGLGTAALSAKEPEALPFCAIAYALTGIFGSILCSIPAVRQSLLA 438


>Glyma08g34720.1 
          Length = 402

 Score =  520 bits (1340), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 281/414 (67%), Positives = 311/414 (75%), Gaps = 35/414 (8%)

Query: 110 VSGILHLLVSLGIILAMDKLLKKAFVAAAIKFPSALFGMFCIFSVLLILDSTIPAAATSL 169
           V G++HL VSLG+ILA+DK LK+AFVAAAIKFPSALFGMFCIFSVL+ILDST+PAAAT+ 
Sbjct: 2   VFGVIHLAVSLGLILAVDKFLKQAFVAAAIKFPSALFGMFCIFSVLIILDSTVPAAATAF 61

Query: 170 VNFFEPALLFIQRWXXXXXXXXXXXXXXXXRDIPAASGLKICYIVAGGWLASLCVAGFTA 229
           V+FF PA +FIQRW                +DIPAASG KI  I+ GGWLA+ CVAG+ A
Sbjct: 62  VSFFVPAFMFIQRWLPLFYVPSLVVLPLAVKDIPAASGAKIGLILVGGWLATFCVAGYAA 121

Query: 230 ITVRKIVKTEMTDAEPMKKPSPFS---------PLEVWAWSGIFLVSFVAAL----WFPT 276
           I VRK VKTE+ +AEPM KP+PFS           +      IF  SF   L    WF  
Sbjct: 122 IAVRKAVKTELVEAEPMGKPAPFSLKCGHGLLTGYKCQNMPSIFACSFSVRLHGWLWF-- 179

Query: 277 ALGTSARTCLPFLLASTVLGYMVGSGLPSSVKKAFHPIICCTLSADLAALAFGYLSHSGL 336
                               Y     LP +VKK FHPIICC LSADL A AFGY S SGL
Sbjct: 180 --------------------YYTLLWLPPNVKKVFHPIICCALSADLTAFAFGYFSRSGL 219

Query: 337 NPVLGYYLTKVSADPGAGDVLMGFLGSVILSFAFSMFKQRKLVKRHAAEIFTSVIFSTIF 396
            PVLGYYLTK S++PGAGD+LMGFL SVILSF+FSMFKQRKLVKRHAAEIFTSVI ST+F
Sbjct: 220 EPVLGYYLTKASSNPGAGDILMGFLESVILSFSFSMFKQRKLVKRHAAEIFTSVIISTLF 279

Query: 397 SLYSTALIGRLVGLEPTLTVSILPRCITVALALSIVSLFEGANSSLTAAVVVVTGLIGAN 456
           SLYSTA +GRLV LEP+LTVSILPRCITVALALSIVSLF+GANSSLTAAVVV+TGL+GAN
Sbjct: 280 SLYSTAFVGRLVQLEPSLTVSILPRCITVALALSIVSLFDGANSSLTAAVVVLTGLVGAN 339

Query: 457 FVQFALDKLKFRDPIARGIATASSAHGLGTAALSAKEPEALPFCAIAYALTGIF 510
           FVQ  LDKL FRDPIARGIATASSAH LGTAALSAKEPEALPFCAIAYAL GI+
Sbjct: 340 FVQATLDKLSFRDPIARGIATASSAHRLGTAALSAKEPEALPFCAIAYALNGIW 393