Jatropha Genome Database

JcCA0000051.40
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0000051.40 - phase: 0 /partial
         (176 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma19g07190.1                                                       132   3e-31
Glyma15g10040.1                                                       117   7e-27
Glyma16g33160.2                                                       105   2e-23
Glyma16g33160.1                                                       105   2e-23
Glyma09g28350.1                                                       105   3e-23
Glyma15g13340.1                                                        96   2e-20
Glyma16g24120.1                                                        79   2e-15
Glyma02g05540.1                                                        79   2e-15
Glyma11g08050.1                                                        78   6e-15
Glyma01g37250.1                                                        74   7e-14

>Glyma19g07190.1 
          Length = 137

 Score =  132 bits (331), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 71/112 (63%), Positives = 78/112 (69%), Gaps = 12/112 (10%)

Query: 43  NIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNTGVNQ 102
           N EI L +   L   +  ++KLI KEGKSATLKLPSGEVRL            GN GVNQ
Sbjct: 32  NTEIHLYRYHHLHPGSCMLSKLITKEGKSATLKLPSGEVRL------------GNVGVNQ 79

Query: 103 KSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPA 154
           K+LGRA SKCWLGK PVVRGVVMNPVDHPH GGEGRAPIGRKK     G+ +
Sbjct: 80  KNLGRARSKCWLGKHPVVRGVVMNPVDHPHEGGEGRAPIGRKKTRNSLGFSS 131


>Glyma15g10040.1 
          Length = 80

 Score =  117 bits (293), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 56/63 (88%), Positives = 59/63 (93%)

Query: 74  LKLPSGEVRLISKNCSATVGQVGNTGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHG 133
           LKLPSGEVRLISKNC ATVGQV N GVNQK+LGRAGSKCWLGK PVVRGVV+NP+DHPHG
Sbjct: 1   LKLPSGEVRLISKNCLATVGQVRNVGVNQKNLGRAGSKCWLGKCPVVRGVVLNPLDHPHG 60

Query: 134 GGE 136
           GGE
Sbjct: 61  GGE 63


>Glyma16g33160.2 
          Length = 195

 Score =  105 bits (262), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 68/125 (54%), Positives = 82/125 (65%), Gaps = 8/125 (6%)

Query: 35  MPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSA--TLKLPSGEVRLISKNCSATV 92
           M +GT IHNIE+  G+GG+L RAAG  AK++ KE  SA   ++LPSG  +LI   C ATV
Sbjct: 59  MRIGTIIHNIELNPGQGGKLVRAAGTSAKIL-KEPTSAYCLIQLPSGVKKLIDSRCRATV 117

Query: 93  GQVGNTGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAP----IGRKKPAT 148
           G V N     + L +AG   WLG+RPVVRGV MNPVDHPHGGGEG++      GR    T
Sbjct: 118 GVVSNPSHGDRKLRKAGHSRWLGRRPVVRGVAMNPVDHPHGGGEGKSKSGGRFGRGS-LT 176

Query: 149 PWGYP 153
           PWG P
Sbjct: 177 PWGKP 181


>Glyma16g33160.1 
          Length = 195

 Score =  105 bits (262), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 68/125 (54%), Positives = 82/125 (65%), Gaps = 8/125 (6%)

Query: 35  MPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSA--TLKLPSGEVRLISKNCSATV 92
           M +GT IHNIE+  G+GG+L RAAG  AK++ KE  SA   ++LPSG  +LI   C ATV
Sbjct: 59  MRIGTIIHNIELNPGQGGKLVRAAGTSAKIL-KEPTSAYCLIQLPSGVKKLIDSRCRATV 117

Query: 93  GQVGNTGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAP----IGRKKPAT 148
           G V N     + L +AG   WLG+RPVVRGV MNPVDHPHGGGEG++      GR    T
Sbjct: 118 GVVSNPSHGDRKLRKAGHSRWLGRRPVVRGVAMNPVDHPHGGGEGKSKSGGRFGRGS-LT 176

Query: 149 PWGYP 153
           PWG P
Sbjct: 177 PWGKP 181


>Glyma09g28350.1 
          Length = 195

 Score =  105 bits (262), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 68/125 (54%), Positives = 82/125 (65%), Gaps = 8/125 (6%)

Query: 35  MPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSA--TLKLPSGEVRLISKNCSATV 92
           M +GT IHNIE+  G+GG+L RAAG  AK++ KE  SA   ++LPSG  +LI   C ATV
Sbjct: 59  MRIGTIIHNIELNPGQGGKLVRAAGTSAKIL-KEPTSAYCLIQLPSGVKKLIDSRCRATV 117

Query: 93  GQVGNTGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAP----IGRKKPAT 148
           G V N     + L +AG   WLG+RPVVRGV MNPVDHPHGGGEG++      GR    T
Sbjct: 118 GVVSNPSHGDRKLRKAGHSRWLGRRPVVRGVAMNPVDHPHGGGEGKSKSGGRFGRGS-LT 176

Query: 149 PWGYP 153
           PWG P
Sbjct: 177 PWGKP 181


>Glyma15g13340.1 
          Length = 195

 Score = 96.3 bits (238), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 49/61 (80%), Positives = 52/61 (85%)

Query: 20  EEVLIDQKEESTSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSG 79
           +EVLIDQKEESTST+M L TAIHNIEITLGK GQL +  GAV KLIAKEGK ATL LPSG
Sbjct: 64  DEVLIDQKEESTSTNMSLDTAIHNIEITLGKSGQLTKGVGAVTKLIAKEGKLATLLLPSG 123

Query: 80  E 80
           E
Sbjct: 124 E 124


>Glyma16g24120.1 
          Length = 260

 Score = 79.0 bits (193), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 45/113 (39%), Positives = 64/113 (56%), Gaps = 15/113 (13%)

Query: 35  MPLGTAIHNIEITLGKGGQLARAAGAVAKLIAK--EGKSATLKLPSGEVRLISKNCSATV 92
           +P G  I N+E  +G  G  ARA+G  A +I+   +  ++ +KLPSG  +++  +C A +
Sbjct: 107 IPEGAVICNVEHHVGDRGVFARASGDYAIVISHNPDNDTSRIKLPSGSKKIVPSDCRAMI 166

Query: 93  GQVGNTGVNQKSLGRAGS---------KCWLGKRPVVRGVVMNPVDHPHGGGE 136
           GQV   G  +K L +AG+          CW    P VRGV MNPV+HPHGGG 
Sbjct: 167 GQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHPHGGGN 215


>Glyma02g05540.1 
          Length = 260

 Score = 79.0 bits (193), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 45/113 (39%), Positives = 64/113 (56%), Gaps = 15/113 (13%)

Query: 35  MPLGTAIHNIEITLGKGGQLARAAGAVAKLIAK--EGKSATLKLPSGEVRLISKNCSATV 92
           +P G  I N+E  +G  G  ARA+G  A +I+   +  ++ +KLPSG  +++  +C A +
Sbjct: 107 IPEGAVICNVEHHVGDRGVFARASGDYAIVISHNPDNDTSRIKLPSGSKKIVPSDCRAMI 166

Query: 93  GQVGNTGVNQKSLGRAGS---------KCWLGKRPVVRGVVMNPVDHPHGGGE 136
           GQV   G  +K L +AG+          CW    P VRGV MNPV+HPHGGG 
Sbjct: 167 GQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHPHGGGN 215


>Glyma11g08050.1 
          Length = 261

 Score = 77.8 bits (190), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 45/113 (39%), Positives = 63/113 (55%), Gaps = 15/113 (13%)

Query: 35  MPLGTAIHNIEITLGKGGQLARAAGAVAKLIAK--EGKSATLKLPSGEVRLISKNCSATV 92
           +P G  I N+E  +G  G  ARA+G  A +I+   +  ++ +KLPSG  +++   C A +
Sbjct: 107 IPEGAVICNVEHHVGDRGVFARASGDYAIVISHNPDNDTSRIKLPSGSKKIVPSGCRAMI 166

Query: 93  GQVGNTGVNQKSLGRAGS---------KCWLGKRPVVRGVVMNPVDHPHGGGE 136
           GQV   G  +K L +AG+          CW    P VRGV MNPV+HPHGGG 
Sbjct: 167 GQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHPHGGGN 215


>Glyma01g37250.1 
          Length = 261

 Score = 74.3 bits (181), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 45/109 (41%), Positives = 64/109 (58%), Gaps = 7/109 (6%)

Query: 35  MPLGTAIHNIEITLGKGGQLARAAGAVAKLIAK--EGKSATLKLPSGEVRLISKNCSATV 92
           +P G  I N+E  +G  G  ARA+G  A +I+   +  ++ +KLPSG  +++   C A +
Sbjct: 107 IPEGAVICNVEHHVGDRGVFARASGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMI 166

Query: 93  GQVGNTGVNQKSLGRAGSKC--WLGKR---PVVRGVVMNPVDHPHGGGE 136
           GQV   G  +K L +AG+    +  KR   P VRGV MNPV+HPHGGG 
Sbjct: 167 GQVAGGGRTEKPLLKAGNAYHKFRVKRNSWPKVRGVAMNPVEHPHGGGN 215