Jatropha Genome Database
- Jcr4U31589.20
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Jcr4U31589.20
(116 letters)
Database: grape_pep_20100319
26,346 sequences; 9,959,944 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
GSVIVT01023557001 assembled CDS 94 2e-20
>GSVIVT01023557001 assembled CDS
Length = 552
Score = 93.6 bits (231), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/48 (97%), Positives = 48/48 (100%)
Query: 34 SLISRFISEQGKILSRRVNRLSLKQQRLITIAIKQARILSSLPFLNNE 81
SLISRFISEQGKILSRRVNRL+LKQQRLITIAIKQARILSSLPFLNNE
Sbjct: 154 SLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSSLPFLNNE 201