Jatropha Genome Database

Jcr4U31589.20
Show Alignment:  
BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jcr4U31589.20 
         (351 letters)

Database: JAT_unigene 
           122,497 sequences; 49,272,789 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

contig00466  length=4651  numreads=175  gene=isogroup00004  stat...   617   e-176

>contig00466  length=4651  numreads=175  gene=isogroup00004
            status=isotig
          Length = 4651

 Score =  617 bits (311), Expect = e-176
 Identities = 338/351 (96%)
 Strand = Plus / Minus

                                                                        
Query: 1    atggataaatccaaacgactttttcttaagtccaagcgatcttttcgtaggcgtttgccc 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1777 atggataaatccaaacgactttttcttaagtccaagcgatcttttcgtaggcgtttgccc 1718

                                                                        
Query: 61   ccgatccaatcgggggatcgaattgattatagaaacatgagtttaattagtcgatttatt 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1717 ccgatccaatcgggggatcgaattgattatagaaacatgagtttaattagtcgatttatt 1658

                                                                        
Query: 121  agtgaacaaggaaaaatattatctagacgggtgaatagattgagtttaaaacaacaacga 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1657 agtgaacaaggaaaaatattatctagacgggtgaatagattgagtttaaaacaacaacga 1598

                                                                        
Query: 181  ttaattactattgctataaagcaagctcgtattttatcttcgttaccttttcttaataat 240
            |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 1597 ttaattactattgctataaagcaagctcgtattttatctttgttaccttttcttaataat 1538

                                                                        
Query: 241  gaaaaacagtttgaaaaaagcgagttggtcactataactactgatcttagaaccagnnnn 300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
Sbjct: 1537 gaaaaacagtttgaaaaaagcgagttggtcactataactactgatcttagaaccagaaaa 1478

                                                               
Query: 301  nnnnnnnntagacttactcctcaattgaatcaaaattccaatttgaactga 351
                    |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1477 aaaaaaaatagacttactcctcaattgaatcaaaattccaatttgaactga 1427