Jatropha Genome Database
- Jcr4U31230.10
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Jcr4U31230.10
(218 letters)
Database: Medicago_aa3.5
47,529 sequences; 14,043,872 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
IMGA|Medtr4g034710.1 ATP synthase subunit a chloroplastic (AHRD ... 242 1e-64
IMGA|Medtr4g051110.1 ATP synthase subunit a chloroplastic (AHRD ... 242 1e-64
IMGA|Medtr3g029550.1 ATP synthase subunit a chloroplastic (AHRD ... 238 2e-63
IMGA|Medtr7g116680.1 ATP synthase subunit a chloroplastic (AHRD ... 189 2e-48
IMGA|Medtr2g059350.1 ATP synthase subunit a chloroplastic (AHRD ... 109 1e-24
IMGA|Medtr4g108470.1 ATP synthase subunit a chloroplastic (AHRD ... 101 4e-22
IMGA|Medtr6g025470.1 ATP synthase subunit a chloroplastic (AHRD ... 90 8e-19
IMGA|Medtr6g025340.1 ATP synthase subunit a chloroplastic (AHRD ... 62 3e-10
>IMGA|Medtr4g034710.1 ATP synthase subunit a chloroplastic (AHRD V1
*-*- B8R490_TRISU); contains Interpro domain(s)
IPR000568 ATPase, F0 complex, subunit A
chr04_pseudomolecule_IMGAG_V3.5 10852351-10855979 E
EGN_Mt100125 20100825
Length = 467
Score = 242 bits (618), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 115/124 (92%), Positives = 120/124 (96%)
Query: 13 VLEFIRDVSKTQIGEEYGSWVPFIGTMFLFIFVSNWAGALLPWKIIELPHGELAAPTNDI 72
VLEFIRDVSKTQIGEEYG WVPFIGT+FLFIFVSNW+GALLPWKII+LPHGELAAPTNDI
Sbjct: 73 VLEFIRDVSKTQIGEEYGPWVPFIGTLFLFIFVSNWSGALLPWKIIKLPHGELAAPTNDI 132
Query: 73 NTTVALALLTSIAYFYAGLRKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNI 132
NTTVALALLTS+AYFYAG+ KKGL YF KYIQPTPILLPINILEDFTKPLSLSFRLFGNI
Sbjct: 133 NTTVALALLTSVAYFYAGISKKGLAYFGKYIQPTPILLPINILEDFTKPLSLSFRLFGNI 192
Query: 133 LADE 136
LADE
Sbjct: 193 LADE 196
>IMGA|Medtr4g051110.1 ATP synthase subunit a chloroplastic (AHRD V1
*-*- B8R490_TRISU); contains Interpro domain(s)
IPR005706 Ribosomal protein S2, bacterial-type
chr04_pseudomolecule_IMGAG_V3.5 15113402-15108879 E
EGN_Mt100125 20100825
Length = 644
Score = 242 bits (617), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 115/124 (92%), Positives = 120/124 (96%)
Query: 13 VLEFIRDVSKTQIGEEYGSWVPFIGTMFLFIFVSNWAGALLPWKIIELPHGELAAPTNDI 72
VLEFIRDVSKTQIGEEYG WVPFIGT+FLFIFVSNW+GALLPWKII+LPHGELAAPTNDI
Sbjct: 307 VLEFIRDVSKTQIGEEYGPWVPFIGTLFLFIFVSNWSGALLPWKIIKLPHGELAAPTNDI 366
Query: 73 NTTVALALLTSIAYFYAGLRKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNI 132
NTTVALALLTS+AYFYAG+ KKGL YF KYIQPTPILLPINILEDFTKPLSLSFRLFGNI
Sbjct: 367 NTTVALALLTSVAYFYAGISKKGLAYFGKYIQPTPILLPINILEDFTKPLSLSFRLFGNI 426
Query: 133 LADE 136
LADE
Sbjct: 427 LADE 430
>IMGA|Medtr3g029550.1 ATP synthase subunit a chloroplastic (AHRD V1
***- B8R490_TRISU); contains Interpro domain(s)
IPR000568 ATPase, F0 complex, subunit A
chr03_pseudomolecule_IMGAG_V3.5 8728107-8727415 E
EGN_Mt100125 20100825
Length = 214
Score = 238 bits (607), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 114/124 (91%), Positives = 119/124 (95%)
Query: 13 VLEFIRDVSKTQIGEEYGSWVPFIGTMFLFIFVSNWAGALLPWKIIELPHGELAAPTNDI 72
VLEFIRDVSKTQIGEEYG WVPFIGT+FLFIFVSNW+GALLPWKII+LPHGELAAPTNDI
Sbjct: 42 VLEFIRDVSKTQIGEEYGPWVPFIGTLFLFIFVSNWSGALLPWKIIKLPHGELAAPTNDI 101
Query: 73 NTTVALALLTSIAYFYAGLRKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNI 132
NT VALALLTS+AYFYAG+ KKGL YF KYIQPTPILLPINILEDFTKPLSLSFRLFGNI
Sbjct: 102 NTIVALALLTSVAYFYAGISKKGLAYFGKYIQPTPILLPINILEDFTKPLSLSFRLFGNI 161
Query: 133 LADE 136
LADE
Sbjct: 162 LADE 165
>IMGA|Medtr7g116680.1 ATP synthase subunit a chloroplastic (AHRD V1
***- B8R490_TRISU); contains Interpro domain(s)
IPR000568 ATPase, F0 complex, subunit A
chr07_pseudomolecule_IMGAG_V3.5 37948042-37944921 E
EGN_Mt100125 20100825
Length = 262
Score = 189 bits (479), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 91/104 (87%), Positives = 96/104 (92%)
Query: 13 VLEFIRDVSKTQIGEEYGSWVPFIGTMFLFIFVSNWAGALLPWKIIELPHGELAAPTNDI 72
VLEFIRDVSKTQIGEEYG VPFIGT+FLFIFVSNW+GALLPWKII+LPHGEL APTNDI
Sbjct: 123 VLEFIRDVSKTQIGEEYGLRVPFIGTLFLFIFVSNWSGALLPWKIIKLPHGELTAPTNDI 182
Query: 73 NTTVALALLTSIAYFYAGLRKKGLGYFSKYIQPTPILLPINILE 116
NTTVALALLTS+AY Y G+ KKGL YF KYIQPTPILLPINILE
Sbjct: 183 NTTVALALLTSVAYLYVGISKKGLAYFGKYIQPTPILLPINILE 226
>IMGA|Medtr2g059350.1 ATP synthase subunit a chloroplastic (AHRD V1
*-*- B8R490_TRISU); contains Interpro domain(s)
IPR019378 GDP-fucose protein O-fucosyltransferase
chr02_pseudomolecule_IMGAG_V3.5 18357695-18349896 E
EGN_Mt100125 20100825
Length = 698
Score = 109 bits (272), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 49/53 (92%), Positives = 52/53 (98%)
Query: 13 VLEFIRDVSKTQIGEEYGSWVPFIGTMFLFIFVSNWAGALLPWKIIELPHGEL 65
VLEFIRDVSKTQIGEEYG WVPFIGT+FLFIFVSNW+GALLPWKII+LPHGEL
Sbjct: 638 VLEFIRDVSKTQIGEEYGPWVPFIGTLFLFIFVSNWSGALLPWKIIKLPHGEL 690
>IMGA|Medtr4g108470.1 ATP synthase subunit a chloroplastic (AHRD V1
***- B7T434_9ROSI); contains Interpro domain(s)
IPR000568 ATPase, F0 complex, subunit A
chr04_pseudomolecule_IMGAG_V3.5 37433322-37432696 H
EGN_Mt100125 20100825
Length = 132
Score = 101 bits (251), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 60/112 (53%), Positives = 62/112 (55%), Gaps = 43/112 (38%)
Query: 25 IGEEYGSWVPFIGTMFLFIFVSNWAGALLPWKIIELPHGELAAPTNDINTTVALALLTSI 84
IGEEYG WVPFIGT+FLFIFVSN
Sbjct: 15 IGEEYGPWVPFIGTLFLFIFVSN------------------------------------- 37
Query: 85 AYFYAGLRKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADE 136
L + GL YF KYIQPTPILLPINILEDFTK LSLSFRLF NILADE
Sbjct: 38 ------LFRIGLAYFDKYIQPTPILLPINILEDFTKFLSLSFRLFENILADE 83
>IMGA|Medtr6g025470.1 ATP synthase subunit a chloroplastic (AHRD V1
***- B8R490_TRISU); contains Interpro domain(s)
IPR000568 ATPase, F0 complex, subunit A
chr06_pseudomolecule_IMGAG_V3.5 5897732-5899361 H
EGN_Mt100125 20100825
Length = 137
Score = 90.1 bits (222), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 55/114 (48%), Positives = 58/114 (50%), Gaps = 35/114 (30%)
Query: 23 TQIGEEYGSWVPFIGTMFLFIFVSNWAGALLPWKIIELPHGELAAPTNDINTTVALALLT 82
+IGEEYG WVPFIGT+ L
Sbjct: 10 VEIGEEYGQWVPFIGTL-----------------------------------FFFFFLEF 34
Query: 83 SIAYFYAGLRKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADE 136
AYFY G+ KGL YF KYIQ TPILL INILEDFTK LSLSFRLF NIL DE
Sbjct: 35 VRAYFYHGISIKGLTYFGKYIQLTPILLTINILEDFTKSLSLSFRLFKNILVDE 88
>IMGA|Medtr6g025340.1 ATP synthase subunit a chloroplastic (AHRD V1
***- D2KLS6_OLEEU); contains Interpro domain(s)
IPR000568 ATPase, F0 complex, subunit A
chr06_pseudomolecule_IMGAG_V3.5 5850043-5849738 H
EGN_Mt100125 20100825
Length = 101
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/40 (72%), Positives = 33/40 (82%)
Query: 92 RKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGN 131
+KKGL F KYIQPTPI+L IN+LEDFTKP LSFR+F N
Sbjct: 8 KKKGLSDFGKYIQPTPIILLINMLEDFTKPFLLSFRIFIN 47