Jatropha Genome Database
- Jcr4U29862.20
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Jcr4U29862.20
(690 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30185.m000928 conserved hypothetical protein 692 0.0
28890.m000006 β-carboxyltransferase (β-CT) subunit of ... 662 0.0
>30185.m000928 conserved hypothetical protein
Length = 2073
Score = 692 bits (349), Expect = 0.0
Identities = 475/521 (91%), Gaps = 15/521 (2%)
Strand = Plus / Plus
Query: 21 ttggaataattacatcaatagttgtattgacaattatcttcgctctcaaatctgtattga 80
|||||| ||||||||||||||||| |||| || ||||||||| |||||| ||||||||||
Sbjct: 1209 ttggaagaattacatcaatagttgcattggcagttatcttcgttctcaagtctgtattga 1268
Query: 81 t---------ttaagtggtagtaacaattacagtgagagttacatttatagttacatttg 131
| |||| ||| ||| |||||||||| || |||| ||||||||||||||||||
Sbjct: 1269 tagttatattttaactggcagttacaattacagcgaaagttccatttatagttacatttg 1328
Query: 132 tggtgaaagtggaaatagtagtgaaagtgagagttccagtctaagaactagcacgaatgg 191
|||||||||||||||||||| |||||| |||||||||||||||||||||| ||||||||
Sbjct: 1329 tggtgaaagtggaaatagtaatgaaagccagagttccagtctaagaactagtacgaatgg 1388
Query: 192 tagcgatttaactataagagaaagttctaatgatctcgatata------actcaaaaata 245
|||||||||||||| |||||||||||||||||||||||||||| |||||||||||
Sbjct: 1389 tagcgatttaactagaagagaaagttctaatgatctcgatataactataactcaaaaata 1448
Query: 246 caagcatttgtgggttcaatgcgaaaattgttatggattaaactataagaaatttttgaa 305
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||
Sbjct: 1449 caagcatttgtgggttcaatgcgaaaattgttatggattaaattataagaaattttttaa 1508
Query: 306 gtcaagaatgaatatttgtgaacaatgtggatatcatttgaaaatgagtagttcagatag 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1509 gtcaagaatgaatatttgtgaacaatgtggatatcatttgaaaatgagtagttcagatag 1568
Query: 366 aattgaactttcgattgacctaggcacttggaatcctatggatgaagacatggtatctct 425
||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||
Sbjct: 1569 aattgaactttcgattgacctaggcacttgggatcctatggatgaagatatggtatctct 1628
Query: 426 ggatcccattgaatttcattcagaagaggaaccttataaagatcgtattgattcttatcn 485
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1629 ggatcccattgaatttcattcagaagaggaaccttataaagatcgtattgattcttatca 1688
Query: 486 nnnnnngacaggattaaccgaggctgttcaaacaggcacag 526
|||||||||||||||||| || ||||||||||||
Sbjct: 1689 aagaaagacaggattaaccgaggccattgaaacaggcacag 1729
>28890.m000006 β-carboxyltransferase (β-CT) subunit of
Het-ACCase
Length = 822
Score = 662 bits (334), Expect = 0.0
Identities = 378/395 (95%)
Strand = Plus / Plus
Query: 250 catttgtgggttcaatgcgaaaattgttatggattaaactataagaaatttttgaagtca 309
|||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||
Sbjct: 16 catttgtgggttcaatgcgaaaattgttatggattaaattataagaaattttttaagtca 75
Query: 310 agaatgaatatttgtgaacaatgtggatatcatttgaaaatgagtagttcagatagaatt 369
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 76 agaatgaatatttgtgaacaatgtggatatcatttgaaaatgagtagttcagatagaatt 135
Query: 370 gaactttcgattgacctaggcacttggaatcctatggatgaagacatggtatctctggat 429
||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||
Sbjct: 136 gaactttcgattgacctaggcacttgggatcctatggatgaagatatggtatctctggat 195
Query: 430 cccattgaatttcattcagaagaggaaccttataaagatcgtattgattcttatcnnnnn 489
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 196 cccattgaatttcattcagaagaggaaccttataaagatcgtattgattcttatcaaaga 255
Query: 490 nngacaggattaaccgaggctgttcaaacaggcacaggtcaactaaacggtattcccgta 549
|||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct: 256 aagacaggattaaccgaggccgttcaaacaggcacaggtcaactaaacggcattcccgta 315
Query: 550 gcaattggggttatggattttcagtttatggggggtagtatgggatccgtagtaggggaa 609
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 316 gcaattggggttatggattttcagtttatggggggtagtatgggatccgtagtaggcgag 375
Query: 610 aaaatcacccgtttgattgagtatgctaccaataa 644
|||||||| |||||||| |||||||||||||||||
Sbjct: 376 aaaatcactcgtttgatcgagtatgctaccaataa 410