Jatropha Genome Database

Jcr4U29862.20

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Jcr4U29862.20 
         (229 letters)

Database: Medicago_aa3.5 
           47,529 sequences; 14,043,872 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr4g034780.1 Acetyl-CoA carboxylase beta subunit (Fragme...   229   7e-61
IMGA|Medtr4g050870.1 Acetyl-coA carboxylase beta subunit (AHRD V...   185   2e-47
IMGA|Medtr6g091170.1 Acetyl-CoA carboxylase beta subunit (Fragme...   120   9e-28
IMGA|Medtr3g080300.1 Acetyl-CoA carboxylase beta subunit (AHRD V...    76   1e-14
IMGA|Medtr5g009280.1 Acetyl CoA carboxylase beta subunit (Fragme...    69   2e-12

>IMGA|Medtr4g034780.1 Acetyl-CoA carboxylase beta subunit (Fragment)
           (AHRD V1 *-*- Q58J80_IPOBA); contains Interpro domain(s)
            IPR000438  Acetyl-CoA carboxylase carboxyl transferase,
           beta subunit chr04_pseudomolecule_IMGAG_V3.5
           10868057-10865698 E EGN_Mt100125 20100825
          Length = 454

 Score =  229 bits (585), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 111/183 (60%), Positives = 130/183 (71%), Gaps = 38/183 (20%)

Query: 78  ITQKYKHLWVQCENCYGLNYKKFLKSRMNICEQCGYHLKMSSSDRIELSIDLGTWNPMDE 137
           I + + HLWV C++CYG NYK+F KS+MNICE CG HLKMSSSDRIEL ID GTWNPMDE
Sbjct: 112 IRKDFSHLWVACDSCYGNNYKRFFKSKMNICEYCGCHLKMSSSDRIELLIDPGTWNPMDE 171

Query: 138 DMVSLDPIEFHSEEEP--------------------------------------YKDRID 159
           DM  +DPIEF+SE+EP                                      Y++R+D
Sbjct: 172 DMFPVDPIEFNSEDEPSENGLEDEDEPSENSLEDEDEPSENSLEDEDEPSENDDYQNRLD 231

Query: 160 SYQKKTGLTEAVQTGTGQLNGIPVAIGVMDFQFMGGSMGSVVGEKITRLIEYATNKFLPL 219
           SYQ +TGL +AVQTGTGQ+NGIPVAIG+MDF+FMGGSMGSVVGEKITRLIEYATN+ LPL
Sbjct: 232 SYQDRTGLLDAVQTGTGQVNGIPVAIGIMDFEFMGGSMGSVVGEKITRLIEYATNQRLPL 291

Query: 220 ILV 222
           I+V
Sbjct: 292 IIV 294


>IMGA|Medtr4g050870.1 Acetyl-coA carboxylase beta subunit (AHRD V1
           *-*- B6RRD4_LYCCH); contains Interpro domain(s)
           IPR000438  Acetyl-CoA carboxylase carboxyl transferase,
           beta subunit chr04_pseudomolecule_IMGAG_V3.5
           15023962-15020678 E EGN_Mt100125 20100825
          Length = 745

 Score =  185 bits (469), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 101/205 (49%), Positives = 120/205 (58%), Gaps = 60/205 (29%)

Query: 78  ITQKYKHLWVQCENCYGLNYKKFLKSRMNICEQCGYHLKMSSSDRIELSIDLGTWNPMDE 137
           I + + HLWV C++CYG NYK+F KS+MNICE CG HLKMSSSDRIEL ID GTWNPMDE
Sbjct: 381 IRKDFSHLWVACDSCYGNNYKRFFKSKMNICEYCGCHLKMSSSDRIELLIDPGTWNPMDE 440

Query: 138 DMVSLDPIEFHSEEEPYKDRI-------------DSYQKKTGLT---------------- 168
           DM  +DPIEF+SE+EP +  +             +  + K GL                 
Sbjct: 441 DMFPVDPIEFNSEDEPSEKGLEDEDEPSENSLEDEPSENKKGLEDEDEPSEKGLEDEDEP 500

Query: 169 ---------------------EAVQTGTGQL----------NGIPVAIGVMDFQFMGGSM 197
                                ++ Q  TG L          NGIPVAIG+MDF+FMGGSM
Sbjct: 501 SENSLEDEDEPSENDDYQNRLDSYQDRTGLLDAVQTGTGQVNGIPVAIGIMDFEFMGGSM 560

Query: 198 GSVVGEKITRLIEYATNKFLPLILV 222
           GSVVGEKITRLIEYATN+ LPLI+V
Sbjct: 561 GSVVGEKITRLIEYATNQRLPLIIV 585


>IMGA|Medtr6g091170.1 Acetyl-CoA carboxylase beta subunit (Fragment)
           (AHRD V1 *-*- Q3LHH3_MORAL)
           chr06_pseudomolecule_IMGAG_V3.5 22462229-22464110 E
           EGN_Mt100125 20100825
          Length = 418

 Score =  120 bits (300), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 52/72 (72%), Positives = 60/72 (83%)

Query: 78  ITQKYKHLWVQCENCYGLNYKKFLKSRMNICEQCGYHLKMSSSDRIELSIDLGTWNPMDE 137
           I + + HLWV C++CYG NYK+F KS+MNICE CG HLKMSSSDRIEL ID GTWNPMDE
Sbjct: 346 IRKDFSHLWVACDSCYGNNYKRFFKSKMNICEYCGCHLKMSSSDRIELLIDPGTWNPMDE 405

Query: 138 DMVSLDPIEFHS 149
           DM  +DPIEF+S
Sbjct: 406 DMFPVDPIEFNS 417


>IMGA|Medtr3g080300.1 Acetyl-CoA carboxylase beta subunit (AHRD V1
           ***- B0LNK4_9CARY) chr03_pseudomolecule_IMGAG_V3.5
           25809317-25809656 H EGN_Mt100125 20100825
          Length = 55

 Score = 76.3 bits (186), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 36/45 (80%), Positives = 39/45 (86%)

Query: 105 MNICEQCGYHLKMSSSDRIELSIDLGTWNPMDEDMVSLDPIEFHS 149
           MNICE  G HLKMSSSDRI+L ID GTWNPMDEDM S+DPIEF+S
Sbjct: 1   MNICEYYGCHLKMSSSDRIKLLIDPGTWNPMDEDMFSVDPIEFNS 45


>IMGA|Medtr5g009280.1 Acetyl CoA carboxylase beta subunit (Fragment)
           (AHRD V1 ***- B0I1B0_CAMSI)
           chr05_pseudomolecule_IMGAG_V3.5 1938381-1938667 H
           EGN_Mt100125 20100825
          Length = 69

 Score = 69.3 bits (168), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 36/56 (64%), Positives = 40/56 (71%), Gaps = 7/56 (12%)

Query: 66  DLTIRESSNDLDITQKYKHLWVQCENCYGLNYKKFLKSRMNICEQCGYHLKMSSSD 121
           D T  ESSNDLD T+KYKHLWV+CENCYGLNYK       NI  +  YHLKMS S+
Sbjct: 21  DFTKTESSNDLDETKKYKHLWVECENCYGLNYK-------NIEIKNEYHLKMSGSN 69