Jatropha Genome Database
- Jcr4U29862.20
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Jcr4U29862.20
(690 letters)
Database: JAT_unigene
122,497 sequences; 49,272,789 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
contig02847 length=2798 numreads=233 gene=isogroup00461 stat... 1227 0.0
tissues_GDVQYP002FNCMB 94 2e-18
>contig02847 length=2798 numreads=233 gene=isogroup00461
status=isotig
Length = 2798
Score = 1227 bits (619), Expect = 0.0
Identities = 636/644 (98%)
Strand = Plus / Plus
Query: 1 atgtctgatactaaatatagttggaataattacatcaatagttgtattgacaattatctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1140 atgtctgatactaaatatagttggaataattacatcaatagttgtattgacaattatctt 1199
Query: 61 cgctctcaaatctgtattgatttaagtggtagtaacaattacagtgagagttacatttat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1200 cgctctcaaatctgtattgatttaagtggtagtaacaattacagtgagagttacatttat 1259
Query: 121 agttacatttgtggtgaaagtggaaatagtagtgaaagtgagagttccagtctaagaact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1260 agttacatttgtggtgaaagtggaaatagtagtgaaagtgagagttccagtctaagaact 1319
Query: 181 agcacgaatggtagcgatttaactataagagaaagttctaatgatctcgatataactcaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1320 agcacgaatggtagcgatttaactataagagaaagttctaatgatctcgatataactcaa 1379
Query: 241 aaatacaagcatttgtgggttcaatgcgaaaattgttatggattaaactataagaaattt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1380 aaatacaagcatttgtgggttcaatgcgaaaattgttatggattaaactataagaaattt 1439
Query: 301 ttgaagtcaagaatgaatatttgtgaacaatgtggatatcatttgaaaatgagtagttca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1440 ttgaagtcaagaatgaatatttgtgaacaatgtggatatcatttgaaaatgagtagttca 1499
Query: 361 gatagaattgaactttcgattgacctaggcacttggaatcctatggatgaagacatggta 420
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1500 gatagaattgaacttttgattgacctaggcacttggaatcctatggatgaagacatggta 1559
Query: 421 tctctggatcccattgaatttcattcagaagaggaaccttataaagatcgtattgattct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1560 tctctggatcccattgaatttcattcagaagaggaaccttataaagatcgtattgattct 1619
Query: 481 tatcnnnnnnngacaggattaaccgaggctgttcaaacaggcacaggtcaactaaacggt 540
|||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1620 tatcaaaaaaagacaggattaaccgaggctgttcaaacaggcacaggtcaactaaacggt 1679
Query: 541 attcccgtagcaattggggttatggattttcagtttatggggggtagtatgggatccgta 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1680 attcccgtagcaattggggttatggattttcagtttatggggggtagtatgggatccgta 1739
Query: 601 gtaggggaaaaaatcacccgtttgattgagtatgctaccaataa 644
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1740 gtaggggaaaaaatcacccgtttgattgagtatgctaccaataa 1783
>tissues_GDVQYP002FNCMB
Length = 459
Score = 93.7 bits (47), Expect = 2e-18
Identities = 56/59 (94%)
Strand = Plus / Minus
Query: 132 tggtgaaagtggaaatagtagtgaaagtgagagttccagtctaagaactagcacgaatg 190
|||||||| ||||||||||||||||| |||||| |||||||||||||||||||||||||
Sbjct: 458 tggtgaaactggaaatagtagtgaaaatgagagatccagtctaagaactagcacgaatg 400