Jatropha Genome Database

Jcr4U29440.10
Show Alignment:  
BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jcr4U29440.10 /partial
         (339 letters)

Database: JAT_unigene 
           122,497 sequences; 49,272,789 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

contig06913  length=5656  numreads=435  gene=isogroup01822  stat...   672   0.0  

>contig06913  length=5656  numreads=435  gene=isogroup01822
            status=isotig
          Length = 5656

 Score =  672 bits (339), Expect = 0.0
 Identities = 339/339 (100%)
 Strand = Plus / Plus

                                                                        
Query: 1    ttcgttattctaagtgggtattctattctaagtaatgaagaacttattattcttaattcg 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2103 ttcgttattctaagtgggtattctattctaagtaatgaagaacttattattcttaattcg 2162

                                                                        
Query: 61   tgggttcaagaattcctatataacttaagcgacacaataaaagctttttcaattctttta 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2163 tgggttcaagaattcctatataacttaagcgacacaataaaagctttttcaattctttta 2222

                                                                        
Query: 121  ttaaccgatttatgtataggattccactcaccccacggttgggaactaatgattggctct 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2223 ttaaccgatttatgtataggattccactcaccccacggttgggaactaatgattggctct 2282

                                                                        
Query: 181  gtctacaaagattttggatttgctcataatgatcaaattatatctggccttgtttccact 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2283 gtctacaaagattttggatttgctcataatgatcaaattatatctggccttgtttccact 2342

                                                                        
Query: 241  tttccagtcattctcgatacaatttttaaatattggattttccgttatttaaatcgtgta 300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2343 tttccagtcattctcgatacaatttttaaatattggattttccgttatttaaatcgtgta 2402

                                                   
Query: 301  tctccgtcacttgtagtgatttatcattcaatgaatgac 339
            |||||||||||||||||||||||||||||||||||||||
Sbjct: 2403 tctccgtcacttgtagtgatttatcattcaatgaatgac 2441